Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22185 and AO353_22190 overlap by 4 nucleotides AO353_22190 and AO353_22195 overlap by 4 nucleotides AO353_22195 and AO353_22200 are separated by 37 nucleotides AO353_22200 and AO353_22205 are separated by 102 nucleotides
AO353_22185: AO353_22185 - metal ABC transporter substrate-binding protein, at 4,858,930 to 4,859,745
_22185
AO353_22190: AO353_22190 - methionine ABC transporter ATP-binding protein, at 4,859,742 to 4,860,722
_22190
AO353_22195: AO353_22195 - metal ABC transporter permease, at 4,860,719 to 4,861,390
_22195
AO353_22200: AO353_22200 - metal-binding protein, at 4,861,428 to 4,861,889
_22200
AO353_22205: AO353_22205 - copper resistance protein CopB, at 4,861,992 to 4,862,927
_22205
Position (kb)
4860
4861
4862 Strain fitness (log2 ratio)
-2
-1
0
1 at 4859.864 kb on + strand, within AO353_22190 at 4860.074 kb on + strand, within AO353_22190 at 4860.097 kb on + strand, within AO353_22190 at 4860.106 kb on + strand, within AO353_22190 at 4860.107 kb on - strand, within AO353_22190 at 4860.118 kb on + strand, within AO353_22190 at 4860.118 kb on + strand, within AO353_22190 at 4860.118 kb on + strand, within AO353_22190 at 4860.216 kb on + strand, within AO353_22190 at 4860.216 kb on + strand, within AO353_22190 at 4860.217 kb on - strand, within AO353_22190 at 4860.217 kb on - strand, within AO353_22190 at 4860.220 kb on + strand, within AO353_22190 at 4860.220 kb on + strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.221 kb on - strand, within AO353_22190 at 4860.465 kb on + strand, within AO353_22190 at 4860.466 kb on - strand, within AO353_22190 at 4860.550 kb on + strand, within AO353_22190 at 4860.550 kb on + strand, within AO353_22190 at 4860.551 kb on - strand, within AO353_22190 at 4860.551 kb on - strand, within AO353_22190 at 4860.551 kb on - strand, within AO353_22190 at 4860.551 kb on - strand, within AO353_22190 at 4860.728 kb on - strand at 4860.785 kb on + strand at 4860.785 kb on + strand at 4860.785 kb on + strand at 4860.785 kb on + strand at 4860.785 kb on + strand at 4860.785 kb on + strand at 4860.785 kb on + strand at 4860.785 kb on + strand at 4860.785 kb on + strand at 4860.785 kb on + strand at 4860.786 kb on - strand at 4860.786 kb on - strand at 4860.786 kb on - strand at 4860.978 kb on + strand, within AO353_22195 at 4861.120 kb on + strand, within AO353_22195 at 4861.120 kb on + strand, within AO353_22195 at 4861.121 kb on - strand, within AO353_22195 at 4861.442 kb on - strand at 4861.472 kb on + strand at 4861.492 kb on + strand, within AO353_22200 at 4861.590 kb on + strand, within AO353_22200 at 4861.590 kb on + strand, within AO353_22200 at 4861.590 kb on + strand, within AO353_22200 at 4861.591 kb on - strand, within AO353_22200 at 4861.591 kb on - strand, within AO353_22200 at 4861.591 kb on - strand, within AO353_22200 at 4861.591 kb on - strand, within AO353_22200 at 4861.605 kb on + strand, within AO353_22200 at 4861.605 kb on + strand, within AO353_22200 at 4861.861 kb on - strand at 4861.861 kb on - strand at 4861.861 kb on - strand at 4861.894 kb on - strand at 4861.964 kb on + strand at 4862.104 kb on + strand, within AO353_22205 at 4862.104 kb on + strand, within AO353_22205 at 4862.104 kb on + strand, within AO353_22205 at 4862.104 kb on + strand, within AO353_22205 at 4862.104 kb on + strand, within AO353_22205 at 4862.104 kb on + strand, within AO353_22205 at 4862.105 kb on - strand, within AO353_22205 at 4862.105 kb on - strand, within AO353_22205 at 4862.105 kb on - strand, within AO353_22205 at 4862.105 kb on - strand, within AO353_22205 at 4862.105 kb on - strand, within AO353_22205 at 4862.105 kb on - strand, within AO353_22205 at 4862.305 kb on + strand, within AO353_22205 at 4862.305 kb on + strand at 4862.305 kb on + strand, within AO353_22205 at 4862.305 kb on + strand, within AO353_22205 at 4862.305 kb on + strand, within AO353_22205 at 4862.306 kb on - strand, within AO353_22205 at 4862.306 kb on - strand, within AO353_22205 at 4862.306 kb on - strand, within AO353_22205 at 4862.306 kb on - strand, within AO353_22205 at 4862.306 kb on - strand, within AO353_22205 at 4862.306 kb on - strand, within AO353_22205 at 4862.306 kb on - strand, within AO353_22205 at 4862.306 kb on - strand, within AO353_22205 at 4862.306 kb on - strand, within AO353_22205 at 4862.332 kb on + strand, within AO353_22205 at 4862.332 kb on + strand, within AO353_22205 at 4862.332 kb on + strand, within AO353_22205 at 4862.332 kb on + strand, within AO353_22205 at 4862.333 kb on - strand, within AO353_22205 at 4862.333 kb on - strand, within AO353_22205 at 4862.333 kb on - strand, within AO353_22205 at 4862.333 kb on - strand, within AO353_22205 at 4862.352 kb on - strand, within AO353_22205
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 4,859,864 + AO353_22190 0.12 -0.1 4,860,074 + AO353_22190 0.34 -1.3 4,860,097 + AO353_22190 0.36 -1.6 4,860,106 + AO353_22190 0.37 -0.8 4,860,107 - AO353_22190 0.37 -1.7 4,860,118 + AO353_22190 0.38 +0.6 4,860,118 + AO353_22190 0.38 -0.7 4,860,118 + AO353_22190 0.38 -1.4 4,860,216 + AO353_22190 0.48 -1.0 4,860,216 + AO353_22190 0.48 -0.2 4,860,217 - AO353_22190 0.48 -1.1 4,860,217 - AO353_22190 0.48 -1.0 4,860,220 + AO353_22190 0.49 -0.0 4,860,220 + AO353_22190 0.49 +1.0 4,860,221 - AO353_22190 0.49 -0.4 4,860,221 - AO353_22190 0.49 +0.0 4,860,221 - AO353_22190 0.49 +0.6 4,860,221 - AO353_22190 0.49 -1.2 4,860,221 - AO353_22190 0.49 -1.2 4,860,465 + AO353_22190 0.74 +0.1 4,860,466 - AO353_22190 0.74 -0.7 4,860,550 + AO353_22190 0.82 +0.0 4,860,550 + AO353_22190 0.82 +0.3 4,860,551 - AO353_22190 0.82 +0.2 4,860,551 - AO353_22190 0.82 -0.2 4,860,551 - AO353_22190 0.82 -0.3 4,860,551 - AO353_22190 0.82 +0.0 4,860,728 - -1.7 4,860,785 + -0.7 4,860,785 + -0.2 4,860,785 + -0.8 4,860,785 + +0.6 4,860,785 + -2.3 4,860,785 + -1.0 4,860,785 + -1.4 4,860,785 + +0.5 4,860,785 + +0.8 4,860,785 + -1.7 4,860,786 - -2.1 4,860,786 - +1.1 4,860,786 - +1.0 4,860,978 + AO353_22195 0.39 -0.1 4,861,120 + AO353_22195 0.60 +1.2 4,861,120 + AO353_22195 0.60 -1.0 4,861,121 - AO353_22195 0.60 +1.2 4,861,442 - -0.2 4,861,472 + -1.0 4,861,492 + AO353_22200 0.14 -1.6 4,861,590 + AO353_22200 0.35 +1.0 4,861,590 + AO353_22200 0.35 -0.3 4,861,590 + AO353_22200 0.35 +0.2 4,861,591 - AO353_22200 0.35 -1.2 4,861,591 - AO353_22200 0.35 -1.2 4,861,591 - AO353_22200 0.35 -0.5 4,861,591 - AO353_22200 0.35 -1.1 4,861,605 + AO353_22200 0.38 +0.4 4,861,605 + AO353_22200 0.38 -0.5 4,861,861 - -1.7 4,861,861 - -0.6 4,861,861 - -0.2 4,861,894 - -1.1 4,861,964 + -0.4 4,862,104 + AO353_22205 0.12 -1.2 4,862,104 + AO353_22205 0.12 +0.7 4,862,104 + AO353_22205 0.12 -1.2 4,862,104 + AO353_22205 0.12 -1.1 4,862,104 + AO353_22205 0.12 +1.6 4,862,104 + AO353_22205 0.12 +1.2 4,862,105 - AO353_22205 0.12 -1.1 4,862,105 - AO353_22205 0.12 -1.4 4,862,105 - AO353_22205 0.12 -0.2 4,862,105 - AO353_22205 0.12 -1.8 4,862,105 - AO353_22205 0.12 -1.2 4,862,105 - AO353_22205 0.12 -0.4 4,862,305 + AO353_22205 0.33 +0.5 4,862,305 + +1.0 4,862,305 + AO353_22205 0.33 -0.4 4,862,305 + AO353_22205 0.33 +0.3 4,862,305 + AO353_22205 0.33 +0.3 4,862,306 - AO353_22205 0.34 +0.8 4,862,306 - AO353_22205 0.34 -0.6 4,862,306 - AO353_22205 0.34 -0.2 4,862,306 - AO353_22205 0.34 -1.6 4,862,306 - AO353_22205 0.34 -1.3 4,862,306 - AO353_22205 0.34 -1.7 4,862,306 - AO353_22205 0.34 -0.3 4,862,306 - AO353_22205 0.34 -0.1 4,862,306 - AO353_22205 0.34 +0.9 4,862,332 + AO353_22205 0.36 -1.2 4,862,332 + AO353_22205 0.36 +0.5 4,862,332 + AO353_22205 0.36 +0.6 4,862,332 + AO353_22205 0.36 -0.2 4,862,333 - AO353_22205 0.36 +1.0 4,862,333 - AO353_22205 0.36 -2.1 4,862,333 - AO353_22205 0.36 -1.4 4,862,333 - AO353_22205 0.36 +0.3 4,862,352 - AO353_22205 0.38 +1.0
Or see this region's nucleotide sequence