Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21830

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
4,786,932	+		AO353_21820	0.53	+2.6
4,786,932	+		AO353_21820	0.53	-1.1
4,786,932	+		AO353_21820	0.53	-0.3
4,786,932	+		AO353_21820	0.53	-0.4
4,786,932	+		AO353_21820	0.53	-0.6
4,786,932	+		AO353_21820	0.53	-1.6
4,786,932	+		AO353_21820	0.53	-0.4
4,786,932	+		AO353_21820	0.53	+0.3
4,786,932	+		AO353_21820	0.53	+1.6
4,786,933	-		AO353_21820	0.53	-0.5
4,786,933	-		AO353_21820	0.53	+0.9
4,786,933	-		AO353_21820	0.53	+0.0
4,786,933	-		AO353_21820	0.53	-0.2
4,786,933	-		AO353_21820	0.53	+1.6
4,786,933	-		AO353_21820	0.53	+0.3
4,786,933	-		AO353_21820	0.53	-0.4
4,786,933	-		AO353_21820	0.53	+0.6
4,786,933	-		AO353_21820	0.53	+0.4
4,787,017	+		AO353_21820	0.64	+0.0
4,787,017	+		AO353_21820	0.64	-1.0
4,787,017	+		AO353_21820	0.64	-1.2
4,787,017	+		AO353_21820	0.64	+1.0
4,787,018	-		AO353_21820	0.64	-0.7
4,787,018	-		AO353_21820	0.64	-0.4
4,787,018	-		AO353_21820	0.64	+1.9
4,787,018	-		AO353_21820	0.64	+1.3
4,787,018	-		AO353_21820	0.64	-0.7
4,787,022	-		AO353_21820	0.65	-1.5
4,787,042	-		AO353_21820	0.68	-0.4
4,787,054	+		AO353_21820	0.69	-1.5
4,787,055	-		AO353_21820	0.69	+0.6
4,787,055	-		AO353_21820	0.69	-0.7
4,787,220	+				+0.3
4,787,220	+				+0.0
4,787,220	+				+0.0
4,787,221	-				+1.0
4,787,221	-				+1.2
4,787,221	-				-1.5
4,787,375	+		AO353_21825	0.18	+0.6
4,787,376	-		AO353_21825	0.18	-0.1
4,787,376	-		AO353_21825	0.18	+0.0
4,787,378	+		AO353_21825	0.19	-1.4
4,787,378	+		AO353_21825	0.19	-1.4
4,787,378	+		AO353_21825	0.19	-1.2
4,787,378	+		AO353_21825	0.19	+1.4
4,787,378	+		AO353_21825	0.19	+0.0
4,787,378	+		AO353_21825	0.19	+1.0
4,787,379	-		AO353_21825	0.19	-0.7
4,787,379	-		AO353_21825	0.19	+1.6
4,787,379	-		AO353_21825	0.19	-0.7
4,787,394	+		AO353_21825	0.22	-0.4
4,787,394	+				+1.0
4,787,394	+		AO353_21825	0.22	-0.5
4,787,395	-		AO353_21825	0.23	+0.6
4,787,395	-		AO353_21825	0.23	-0.2
4,787,395	-		AO353_21825	0.23	-0.3
4,787,395	-		AO353_21825	0.23	-0.4
4,787,479	+		AO353_21825	0.42	+1.6
4,787,480	-		AO353_21825	0.42	+0.5
4,787,510	+		AO353_21825	0.49	+0.3
4,787,510	+		AO353_21825	0.49	-0.6
4,787,510	+		AO353_21825	0.49	-0.4
4,787,510	+		AO353_21825	0.49	+2.4
4,787,511	-		AO353_21825	0.49	-0.4
4,787,511	-		AO353_21825	0.49	-0.4
4,787,511	-		AO353_21825	0.49	+1.3
4,787,511	-		AO353_21825	0.49	-1.0
4,787,511	-		AO353_21825	0.49	+0.0
4,787,511	-		AO353_21825	0.49	-0.4
4,787,511	-		AO353_21825	0.49	+0.9
4,787,511	-		AO353_21825	0.49	-0.5
4,787,583	-		AO353_21825	0.66	-0.7
4,787,583	-		AO353_21825	0.66	+1.3
4,787,583	-		AO353_21825	0.66	-0.2
4,787,657	+				+0.6
4,787,741	-				+0.0
4,787,741	-				+0.4
4,787,741	-				+2.6
4,787,741	-				+1.0
4,787,741	-				+2.0
4,787,749	+				+1.3
4,787,750	-				+1.1
4,787,750	-				+3.2
4,787,750	-				+0.9
4,787,783	+				+0.1
4,787,784	-				+1.0
4,787,784	-				+2.0
4,787,784	-				+1.1
4,787,784	-				+0.8
4,787,784	-				+0.6
4,787,784	-				+0.4
4,787,784	-				+0.1
4,787,784	-				+0.6
4,787,785	+				+1.0
4,787,785	+				+0.5
4,787,785	+				-2.7
4,787,785	+				-0.7
4,787,786	-				+0.8
4,787,786	-				+0.0
4,787,786	-				+1.6
4,787,788	-				+0.0
4,787,788	-				-0.7
4,787,788	-				+0.8
4,787,788	-				+0.1
4,787,801	-				+1.2
4,787,801	-				+1.0
4,787,801	-				+0.5
4,787,807	-				+0.8
4,787,842	+				-1.5
4,787,842	+				-1.7
4,787,843	-				+1.6
4,787,843	-				+1.4
4,787,843	-				+1.5
4,787,843	-				+3.8
4,787,850	+				-0.2
4,787,872	+				+2.0
4,787,872	+				+0.5
4,787,872	+				+1.6
4,787,872	+				+1.1
4,787,873	-				+2.1
4,787,873	-				+0.9
4,787,873	-				+1.2
4,787,880	+				+1.6
4,787,880	+				+2.7
4,787,880	+				+2.2
4,787,880	+				+0.2
4,787,881	-				+1.2
4,787,881	-				+0.6
4,787,881	-				+1.3
4,787,881	-				+1.2
4,787,881	-				+3.2
4,787,881	-				+2.0
4,787,881	-				+1.6
4,787,881	-				+1.2
4,787,881	-				+1.2
4,787,881	-				+2.0
4,787,881	-				+2.2
4,787,881	-				+0.4
4,787,883	+				+2.4
4,787,883	+				+1.5
4,787,883	+				+1.6
4,787,883	+				+2.3
4,787,883	+				+1.5
4,787,883	+				+1.2
4,787,884	-				+1.4
4,787,884	-				+2.6
4,787,884	-				+0.0
4,787,914	+				+1.6
4,787,914	+				+1.6
4,787,914	+				+1.3
4,787,914	+				+1.9
4,787,914	+				+1.0
4,787,914	+				+1.1
4,787,914	+				+1.4
4,787,914	+				+1.1
4,787,915	-				+2.0
4,787,915	-				+1.3
4,787,915	-				+1.5
4,787,915	-				+1.0
4,787,915	-				+0.8
4,787,915	-				+0.8
4,787,915	-				+1.3
4,787,917	+				+1.2
4,787,917	+				-0.7
4,787,917	+				+1.9
4,787,917	+				+1.8
4,787,917	+				+1.0
4,787,918	-				+2.3
4,787,918	-				+1.0
4,787,918	-				+0.9
4,787,952	+				+2.9
4,787,952	+				+1.6
4,787,953	-				+2.1
4,787,989	+		AO353_21830	0.11	+2.3
4,787,990	-				-0.4
4,788,109	-		AO353_21830	0.32	+0.9
4,788,147	+		AO353_21830	0.38	+4.0
4,788,147	+		AO353_21830	0.38	+2.1
4,788,148	-		AO353_21830	0.38	+0.2
4,788,148	-		AO353_21830	0.38	+1.2
4,788,168	-		AO353_21830	0.42	+1.1
4,788,168	-				+2.6
4,788,190	+		AO353_21830	0.45	+0.2
4,788,219	+				+0.6
4,788,219	+		AO353_21830	0.50	+1.6
4,788,219	+		AO353_21830	0.50	+1.4
4,788,219	+		AO353_21830	0.50	+2.6
4,788,220	-		AO353_21830	0.51	+0.3
4,788,220	-		AO353_21830	0.51	+1.9
4,788,236	+		AO353_21830	0.53	+1.0
4,788,236	+		AO353_21830	0.53	+1.1
4,788,236	+		AO353_21830	0.53	+0.2
4,788,236	+		AO353_21830	0.53	+2.6
4,788,237	-		AO353_21830	0.54	+1.2
4,788,237	-		AO353_21830	0.54	+1.6
4,788,237	-		AO353_21830	0.54	+2.2
4,788,237	-		AO353_21830	0.54	+1.7
4,788,237	-		AO353_21830	0.54	+0.0
4,788,237	-		AO353_21830	0.54	+2.4
4,788,237	-		AO353_21830	0.54	+1.3
4,788,237	-		AO353_21830	0.54	+2.6
4,788,237	-		AO353_21830	0.54	+2.0
4,788,237	-		AO353_21830	0.54	+0.3
4,788,238	+		AO353_21830	0.54	+1.2
4,788,238	+		AO353_21830	0.54	+2.1
4,788,238	+		AO353_21830	0.54	+2.3
4,788,238	+				+0.6
4,788,238	+		AO353_21830	0.54	+2.4
4,788,238	+		AO353_21830	0.54	+0.6
4,788,239	-				+1.0
4,788,239	-		AO353_21830	0.54	+1.0
4,788,239	-		AO353_21830	0.54	+0.8
4,788,239	-		AO353_21830	0.54	+2.0
4,788,239	-		AO353_21830	0.54	+1.3
4,788,239	-		AO353_21830	0.54	-0.7
4,788,239	-		AO353_21830	0.54	+1.5
4,788,239	-		AO353_21830	0.54	+3.0
4,788,239	-		AO353_21830	0.54	+1.5
4,788,239	-		AO353_21830	0.54	+2.6
4,788,239	-		AO353_21830	0.54	+1.2
4,788,239	-		AO353_21830	0.54	+0.8
4,788,239	-		AO353_21830	0.54	+1.1
4,788,384	+		AO353_21830	0.79	+1.6
4,788,384	+		AO353_21830	0.79	+1.3
4,788,384	+		AO353_21830	0.79	+0.5
4,788,384	+		AO353_21830	0.79	+1.5
4,788,384	+		AO353_21830	0.79	+1.9
4,788,384	+				+0.6
4,788,384	+		AO353_21830	0.79	+1.6
4,788,384	+		AO353_21830	0.79	+2.4
4,788,384	+		AO353_21830	0.79	+2.2
4,788,384	+		AO353_21830	0.79	+1.8
4,788,384	+		AO353_21830	0.79	+2.2
4,788,384	+		AO353_21830	0.79	+0.6
4,788,384	+		AO353_21830	0.79	-0.1
4,788,384	+		AO353_21830	0.79	+1.6
4,788,384	+		AO353_21830	0.79	+2.6
4,788,384	+		AO353_21830	0.79	+1.4
4,788,384	+		AO353_21830	0.79	+2.0
4,788,384	+		AO353_21830	0.79	+1.2
4,788,384	+		AO353_21830	0.79	+1.3
4,788,384	+		AO353_21830	0.79	+3.4
4,788,384	+		AO353_21830	0.79	+2.0
4,788,384	+		AO353_21830	0.79	+0.9
4,788,384	+		AO353_21830	0.79	+2.6
4,788,384	+				+1.6
4,788,384	+		AO353_21830	0.79	+1.0
4,788,384	+		AO353_21830	0.79	+1.4
4,788,384	+		AO353_21830	0.79	+3.2
4,788,385	-		AO353_21830	0.79	+1.9
4,788,385	-		AO353_21830	0.79	+1.9
4,788,385	-		AO353_21830	0.79	+2.1
4,788,385	-		AO353_21830	0.79	+1.0
4,788,385	-		AO353_21830	0.79	+1.7
4,788,385	-		AO353_21830	0.79	+1.0
4,788,385	-		AO353_21830	0.79	+1.9
4,788,385	-		AO353_21830	0.79	+0.7
4,788,385	-		AO353_21830	0.79	+0.0
4,788,385	-		AO353_21830	0.79	+2.0
4,788,385	-		AO353_21830	0.79	+0.9
4,788,385	-		AO353_21830	0.79	+1.0
4,788,385	-		AO353_21830	0.79	+0.6
4,788,385	-		AO353_21830	0.79	+0.9
4,788,385	-		AO353_21830	0.79	+1.8
4,788,385	-				+0.6
4,788,385	-		AO353_21830	0.79	+2.6
4,788,385	-		AO353_21830	0.79	+1.3
4,788,385	-		AO353_21830	0.79	+0.2
4,788,385	-		AO353_21830	0.79	+0.6
4,788,385	-		AO353_21830	0.79	+1.6
4,788,385	-		AO353_21830	0.79	+0.9
4,788,385	-		AO353_21830	0.79	+1.4
4,788,385	-		AO353_21830	0.79	+0.5
4,788,385	-		AO353_21830	0.79	+1.6
4,788,385	-		AO353_21830	0.79	+0.4
4,788,385	-		AO353_21830	0.79	+2.2
4,788,385	-		AO353_21830	0.79	+2.3
4,788,413	+		AO353_21830	0.84	+0.6
4,788,413	+		AO353_21830	0.84	+1.8
4,788,413	+		AO353_21830	0.84	+1.1
4,788,413	+		AO353_21830	0.84	+2.0
4,788,413	+		AO353_21830	0.84	+1.3
4,788,413	+		AO353_21830	0.84	+1.6
4,788,414	-				+0.0
4,788,414	-				+1.2
4,788,414	-		AO353_21830	0.84	+1.3
4,788,414	-		AO353_21830	0.84	+2.0
4,788,414	-		AO353_21830	0.84	+1.2
4,788,414	-		AO353_21830	0.84	+1.8
4,788,414	-		AO353_21830	0.84	+1.0
4,788,414	-		AO353_21830	0.84	+1.8
4,788,572	-				-0.5
4,788,604	+				-0.9
4,788,604	+				+0.3
4,788,604	+				+0.0
4,788,604	+				-0.7
4,788,604	+				-0.3
4,788,604	+				-1.5
4,788,604	+				+0.3
4,788,604	+				+0.4
4,788,604	+				+0.6
4,788,604	+				-1.0
4,788,605	-				+0.2
4,788,605	-				-1.0
4,788,605	-				+0.6
4,788,605	-				+0.0
4,788,605	-				-1.8
4,788,605	-				+0.0
4,788,605	-				+0.6
4,788,605	-				+0.2
4,788,646	+				+0.9
4,788,647	-				+0.8
4,788,784	+		AO353_21835	0.15	-0.6
4,788,784	+		AO353_21835	0.15	-1.2
4,788,785	-		AO353_21835	0.15	-0.8
4,788,785	-				+0.0
4,788,785	-		AO353_21835	0.15	+0.6
4,788,785	-		AO353_21835	0.15	-0.4
4,788,785	-		AO353_21835	0.15	-2.5
4,788,785	-		AO353_21835	0.15	+1.6
4,788,820	+		AO353_21835	0.17	+1.9
4,788,820	+		AO353_21835	0.17	-1.4
4,788,820	+		AO353_21835	0.17	+0.9
4,788,821	-		AO353_21835	0.17	-0.0
4,788,824	+		AO353_21835	0.17	-1.2
4,788,824	+		AO353_21835	0.17	-0.0
4,788,824	+		AO353_21835	0.17	+0.1
4,788,825	-		AO353_21835	0.17	-1.0
4,788,825	-		AO353_21835	0.17	-0.2
4,788,825	-		AO353_21835	0.17	+0.1
4,788,892	+		AO353_21835	0.21	+0.1
4,788,892	+		AO353_21835	0.21	-0.2
4,788,892	+		AO353_21835	0.21	-1.2
4,788,893	-				+0.1
4,788,982	+		AO353_21835	0.26	+0.5
4,788,982	+		AO353_21835	0.26	-1.2
4,788,982	+		AO353_21835	0.26	+0.6
4,788,982	+		AO353_21835	0.26	-0.7
4,788,983	-		AO353_21835	0.26	+0.4
4,788,983	-		AO353_21835	0.26	-0.9
4,788,985	+		AO353_21835	0.26	+0.9
4,788,985	+		AO353_21835	0.26	-0.5
4,788,985	+		AO353_21835	0.26	+1.6
4,788,985	+		AO353_21835	0.26	+1.1
4,788,986	-		AO353_21835	0.26	-1.3
4,788,986	-		AO353_21835	0.26	-0.4
4,789,015	+		AO353_21835	0.28	-1.3
4,789,016	-		AO353_21835	0.28	-0.6
4,789,069	+		AO353_21835	0.31	-0.8
4,789,069	+		AO353_21835	0.31	-1.5
4,789,069	+		AO353_21835	0.31	-0.8
4,789,070	-		AO353_21835	0.31	-0.4
4,789,070	-		AO353_21835	0.31	-2.8
4,789,414	+		AO353_21835	0.50	-0.9
4,789,414	+		AO353_21835	0.50	-0.2
4,789,414	+		AO353_21835	0.50	-0.9
4,789,415	-		AO353_21835	0.50	+0.9