Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21365 and AO353_21370 are separated by 116 nucleotides AO353_21370 and AO353_21375 are separated by 212 nucleotides
AO353_21365: AO353_21365 - Inositol 2-dehydrogenase (EC 1.1.1.18) (from data) , at 4,677,461 to 4,678,471
_21365
AO353_21370: AO353_21370 - protein iolH, at 4,678,588 to 4,679,448
_21370
AO353_21375: AO353_21375 - oxidoreductase, at 4,679,661 to 4,680,713
_21375
Position (kb)
4678
4679
4680 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4677.845 kb on + strand, within AO353_21365 at 4677.846 kb on - strand, within AO353_21365 at 4677.950 kb on + strand, within AO353_21365 at 4677.950 kb on + strand, within AO353_21365 at 4677.950 kb on + strand, within AO353_21365 at 4677.950 kb on + strand, within AO353_21365 at 4677.951 kb on - strand, within AO353_21365 at 4677.951 kb on - strand, within AO353_21365 at 4677.951 kb on - strand, within AO353_21365 at 4677.951 kb on - strand, within AO353_21365 at 4678.025 kb on + strand, within AO353_21365 at 4678.025 kb on + strand, within AO353_21365 at 4678.025 kb on + strand, within AO353_21365 at 4678.025 kb on + strand, within AO353_21365 at 4678.026 kb on - strand, within AO353_21365 at 4678.026 kb on - strand, within AO353_21365 at 4678.026 kb on - strand, within AO353_21365 at 4678.036 kb on - strand, within AO353_21365 at 4678.036 kb on - strand, within AO353_21365 at 4678.157 kb on + strand, within AO353_21365 at 4678.158 kb on - strand, within AO353_21365 at 4678.163 kb on + strand, within AO353_21365 at 4678.463 kb on + strand at 4678.464 kb on - strand at 4678.601 kb on + strand at 4678.601 kb on + strand at 4678.609 kb on + strand at 4678.609 kb on + strand at 4678.609 kb on + strand at 4678.609 kb on + strand at 4678.609 kb on + strand at 4678.609 kb on + strand at 4678.610 kb on - strand at 4678.610 kb on - strand at 4678.610 kb on - strand at 4678.610 kb on - strand at 4678.610 kb on - strand at 4678.610 kb on - strand at 4678.610 kb on - strand at 4678.610 kb on - strand at 4678.610 kb on - strand at 4678.615 kb on + strand at 4678.615 kb on + strand at 4678.615 kb on + strand at 4678.615 kb on + strand at 4678.711 kb on + strand, within AO353_21370 at 4678.711 kb on + strand, within AO353_21370 at 4678.712 kb on - strand, within AO353_21370 at 4678.804 kb on + strand, within AO353_21370 at 4678.804 kb on + strand, within AO353_21370 at 4678.804 kb on + strand, within AO353_21370 at 4678.804 kb on + strand, within AO353_21370 at 4678.805 kb on - strand, within AO353_21370 at 4678.805 kb on - strand, within AO353_21370 at 4678.805 kb on - strand, within AO353_21370 at 4678.805 kb on - strand, within AO353_21370 at 4678.805 kb on - strand, within AO353_21370 at 4678.851 kb on + strand, within AO353_21370 at 4678.852 kb on - strand, within AO353_21370 at 4679.029 kb on + strand, within AO353_21370 at 4679.029 kb on + strand, within AO353_21370 at 4679.098 kb on + strand, within AO353_21370 at 4679.098 kb on + strand, within AO353_21370 at 4679.099 kb on - strand, within AO353_21370 at 4679.099 kb on - strand, within AO353_21370 at 4679.099 kb on - strand, within AO353_21370 at 4679.099 kb on - strand, within AO353_21370 at 4679.104 kb on + strand, within AO353_21370 at 4679.104 kb on + strand, within AO353_21370 at 4679.128 kb on + strand, within AO353_21370 at 4679.129 kb on - strand, within AO353_21370 at 4679.167 kb on + strand, within AO353_21370 at 4679.209 kb on + strand, within AO353_21370 at 4679.209 kb on + strand, within AO353_21370 at 4679.209 kb on + strand, within AO353_21370 at 4679.210 kb on - strand, within AO353_21370 at 4679.210 kb on - strand, within AO353_21370 at 4679.210 kb on - strand, within AO353_21370 at 4679.210 kb on - strand, within AO353_21370 at 4679.239 kb on + strand, within AO353_21370 at 4679.239 kb on + strand, within AO353_21370 at 4679.517 kb on + strand at 4679.517 kb on + strand at 4679.518 kb on - strand at 4679.518 kb on - strand at 4679.518 kb on - strand at 4679.518 kb on - strand at 4679.538 kb on - strand at 4679.538 kb on - strand at 4679.624 kb on + strand at 4679.625 kb on - strand at 4679.625 kb on - strand at 4679.625 kb on - strand at 4679.625 kb on - strand at 4679.723 kb on + strand at 4679.723 kb on + strand at 4679.723 kb on + strand at 4679.723 kb on + strand at 4679.724 kb on - strand at 4679.724 kb on - strand at 4679.724 kb on - strand at 4679.724 kb on - strand at 4679.724 kb on - strand at 4679.724 kb on - strand at 4679.724 kb on - strand at 4679.782 kb on + strand, within AO353_21375 at 4679.783 kb on - strand, within AO353_21375 at 4679.783 kb on - strand, within AO353_21375 at 4680.015 kb on + strand, within AO353_21375 at 4680.109 kb on + strand, within AO353_21375 at 4680.109 kb on + strand, within AO353_21375 at 4680.109 kb on + strand, within AO353_21375 at 4680.109 kb on + strand, within AO353_21375 at 4680.110 kb on - strand, within AO353_21375 at 4680.110 kb on - strand, within AO353_21375 at 4680.110 kb on - strand, within AO353_21375 at 4680.225 kb on + strand, within AO353_21375 at 4680.225 kb on + strand, within AO353_21375 at 4680.241 kb on - strand, within AO353_21375 at 4680.323 kb on + strand, within AO353_21375 at 4680.323 kb on + strand, within AO353_21375 at 4680.323 kb on + strand, within AO353_21375 at 4680.324 kb on - strand, within AO353_21375 at 4680.324 kb on - strand, within AO353_21375 at 4680.324 kb on - strand, within AO353_21375 at 4680.324 kb on - strand, within AO353_21375 at 4680.381 kb on + strand, within AO353_21375
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 4,677,845 + AO353_21365 0.38 +0.5 4,677,846 - AO353_21365 0.38 -0.9 4,677,950 + AO353_21365 0.48 +0.1 4,677,950 + AO353_21365 0.48 +1.4 4,677,950 + AO353_21365 0.48 -1.4 4,677,950 + AO353_21365 0.48 +0.4 4,677,951 - AO353_21365 0.48 +0.3 4,677,951 - AO353_21365 0.48 +0.7 4,677,951 - AO353_21365 0.48 -1.3 4,677,951 - AO353_21365 0.48 +1.3 4,678,025 + AO353_21365 0.56 -2.2 4,678,025 + AO353_21365 0.56 +0.4 4,678,025 + AO353_21365 0.56 +0.6 4,678,025 + AO353_21365 0.56 +1.2 4,678,026 - AO353_21365 0.56 -0.6 4,678,026 - AO353_21365 0.56 -0.3 4,678,026 - AO353_21365 0.56 +0.0 4,678,036 - AO353_21365 0.57 -0.4 4,678,036 - AO353_21365 0.57 -1.5 4,678,157 + AO353_21365 0.69 +0.7 4,678,158 - AO353_21365 0.69 +0.8 4,678,163 + AO353_21365 0.69 +0.5 4,678,463 + -0.5 4,678,464 - +0.1 4,678,601 + +0.1 4,678,601 + +1.5 4,678,609 + -1.3 4,678,609 + -0.4 4,678,609 + -0.3 4,678,609 + +0.6 4,678,609 + +0.3 4,678,609 + -1.5 4,678,610 - +0.1 4,678,610 - -0.4 4,678,610 - +0.1 4,678,610 - +0.5 4,678,610 - +0.2 4,678,610 - +0.2 4,678,610 - +2.0 4,678,610 - -1.4 4,678,610 - +0.5 4,678,615 + -1.0 4,678,615 + +0.7 4,678,615 + -0.4 4,678,615 + +0.3 4,678,711 + AO353_21370 0.14 -1.5 4,678,711 + AO353_21370 0.14 +0.7 4,678,712 - AO353_21370 0.14 -1.5 4,678,804 + AO353_21370 0.25 -0.1 4,678,804 + AO353_21370 0.25 +0.3 4,678,804 + AO353_21370 0.25 -0.9 4,678,804 + AO353_21370 0.25 -0.3 4,678,805 - AO353_21370 0.25 -0.5 4,678,805 - AO353_21370 0.25 +1.7 4,678,805 - AO353_21370 0.25 -0.0 4,678,805 - AO353_21370 0.25 -0.2 4,678,805 - AO353_21370 0.25 -0.1 4,678,851 + AO353_21370 0.31 +1.1 4,678,852 - AO353_21370 0.31 -0.1 4,679,029 + AO353_21370 0.51 -0.2 4,679,029 + AO353_21370 0.51 +3.5 4,679,098 + AO353_21370 0.59 +0.8 4,679,098 + AO353_21370 0.59 +1.1 4,679,099 - AO353_21370 0.59 -3.0 4,679,099 - AO353_21370 0.59 +0.7 4,679,099 - AO353_21370 0.59 +0.4 4,679,099 - AO353_21370 0.59 -0.9 4,679,104 + AO353_21370 0.60 -0.1 4,679,104 + AO353_21370 0.60 -0.2 4,679,128 + AO353_21370 0.63 +0.4 4,679,129 - AO353_21370 0.63 +1.3 4,679,167 + AO353_21370 0.67 -1.3 4,679,209 + AO353_21370 0.72 +1.7 4,679,209 + AO353_21370 0.72 +0.7 4,679,209 + AO353_21370 0.72 +0.7 4,679,210 - AO353_21370 0.72 -0.1 4,679,210 - AO353_21370 0.72 +0.7 4,679,210 - AO353_21370 0.72 +1.7 4,679,210 - AO353_21370 0.72 -1.3 4,679,239 + AO353_21370 0.76 -0.8 4,679,239 + AO353_21370 0.76 +1.0 4,679,517 + -0.4 4,679,517 + +1.0 4,679,518 - +1.7 4,679,518 - -0.3 4,679,518 - -0.3 4,679,518 - +0.1 4,679,538 - -0.3 4,679,538 - +0.0 4,679,624 + -0.3 4,679,625 - +2.3 4,679,625 - +1.0 4,679,625 - +1.1 4,679,625 - -0.3 4,679,723 + -1.2 4,679,723 + -0.5 4,679,723 + -1.5 4,679,723 + +0.6 4,679,724 - -0.9 4,679,724 - -0.3 4,679,724 - -0.3 4,679,724 - -1.5 4,679,724 - -0.9 4,679,724 - -0.9 4,679,724 - +0.7 4,679,782 + AO353_21375 0.11 +0.5 4,679,783 - AO353_21375 0.12 -0.3 4,679,783 - AO353_21375 0.12 +0.1 4,680,015 + AO353_21375 0.34 -1.1 4,680,109 + AO353_21375 0.43 -0.8 4,680,109 + AO353_21375 0.43 -0.5 4,680,109 + AO353_21375 0.43 +0.8 4,680,109 + AO353_21375 0.43 -0.0 4,680,110 - AO353_21375 0.43 -0.8 4,680,110 - AO353_21375 0.43 +1.7 4,680,110 - AO353_21375 0.43 -1.2 4,680,225 + AO353_21375 0.54 -1.9 4,680,225 + AO353_21375 0.54 -0.4 4,680,241 - AO353_21375 0.55 +0.9 4,680,323 + AO353_21375 0.63 -0.5 4,680,323 + AO353_21375 0.63 -1.0 4,680,323 + AO353_21375 0.63 +0.6 4,680,324 - AO353_21375 0.63 -0.9 4,680,324 - AO353_21375 0.63 -0.3 4,680,324 - AO353_21375 0.63 +1.0 4,680,324 - AO353_21375 0.63 -0.9 4,680,381 + AO353_21375 0.68 -1.9
Or see this region's nucleotide sequence