Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20665

Experiment: L-Aspartic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_20660 and AO353_20665 are separated by 63 nucleotidesAO353_20665 and AO353_20670 are separated by 218 nucleotides AO353_20660: AO353_20660 - pseudouridine synthase, at 4,533,888 to 4,534,712 _20660 AO353_20665: AO353_20665 - N-(5'-phosphoribosyl)anthranilate isomerase, at 4,534,776 to 4,535,399 _20665 AO353_20670: AO353_20670 - acetyl-CoA carboxylase subunit beta, at 4,535,618 to 4,536,538 _20670 Position (kb) 4534 4535 4536Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4533.817 kb on + strandat 4533.817 kb on + strandat 4533.817 kb on + strandat 4533.818 kb on + strandat 4533.818 kb on - strandat 4533.819 kb on + strandat 4533.819 kb on + strandat 4533.819 kb on + strandat 4533.819 kb on + strandat 4533.819 kb on + strandat 4533.819 kb on + strandat 4533.819 kb on + strandat 4533.819 kb on + strandat 4533.819 kb on + strandat 4533.819 kb on + strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.820 kb on - strandat 4533.836 kb on + strandat 4533.836 kb on + strandat 4533.837 kb on - strandat 4533.837 kb on - strandat 4533.866 kb on + strandat 4533.866 kb on + strandat 4533.866 kb on + strandat 4533.867 kb on - strandat 4533.867 kb on - strandat 4533.867 kb on - strandat 4533.867 kb on - strandat 4533.868 kb on + strandat 4533.868 kb on + strandat 4533.868 kb on + strandat 4533.868 kb on + strandat 4533.868 kb on + strandat 4533.869 kb on - strandat 4533.869 kb on - strandat 4533.869 kb on - strandat 4533.869 kb on - strandat 4533.873 kb on - strandat 4533.873 kb on - strandat 4533.930 kb on + strandat 4533.931 kb on - strandat 4533.991 kb on + strand, within AO353_20660at 4533.992 kb on - strand, within AO353_20660at 4534.248 kb on + strand, within AO353_20660at 4534.249 kb on - strand, within AO353_20660at 4534.249 kb on - strand, within AO353_20660at 4534.617 kb on + strand, within AO353_20660at 4534.617 kb on + strand, within AO353_20660at 4534.618 kb on - strand, within AO353_20660at 4534.618 kb on - strand, within AO353_20660at 4534.618 kb on - strand, within AO353_20660at 4534.618 kb on - strand, within AO353_20660at 4534.635 kb on + strandat 4534.665 kb on + strandat 4534.665 kb on + strandat 4534.665 kb on + strandat 4534.666 kb on - strandat 4534.666 kb on - strandat 4534.666 kb on - strandat 4534.666 kb on - strandat 4534.666 kb on - strandat 4534.872 kb on + strand, within AO353_20665at 4534.872 kb on + strand, within AO353_20665at 4534.872 kb on + strand, within AO353_20665at 4534.872 kb on + strand, within AO353_20665at 4534.872 kb on + strand, within AO353_20665at 4534.873 kb on - strand, within AO353_20665at 4534.873 kb on - strand, within AO353_20665at 4534.873 kb on - strand, within AO353_20665at 4534.873 kb on - strand, within AO353_20665at 4535.062 kb on - strand, within AO353_20665at 4535.073 kb on + strand, within AO353_20665at 4535.073 kb on + strand, within AO353_20665at 4535.073 kb on + strand, within AO353_20665at 4535.073 kb on + strand, within AO353_20665at 4535.073 kb on + strand, within AO353_20665at 4535.073 kb on + strand, within AO353_20665at 4535.073 kb on + strand, within AO353_20665at 4535.074 kb on - strand, within AO353_20665at 4535.074 kb on - strand, within AO353_20665at 4535.074 kb on - strand, within AO353_20665at 4535.074 kb on - strand, within AO353_20665at 4535.074 kb on - strand, within AO353_20665at 4535.077 kb on + strand, within AO353_20665at 4535.077 kb on + strand, within AO353_20665at 4535.077 kb on + strand, within AO353_20665at 4535.077 kb on + strand, within AO353_20665at 4535.077 kb on + strand, within AO353_20665at 4535.077 kb on + strand, within AO353_20665at 4535.077 kb on + strand, within AO353_20665at 4535.078 kb on - strand, within AO353_20665at 4535.078 kb on - strand, within AO353_20665at 4535.160 kb on - strand, within AO353_20665at 4535.160 kb on - strand, within AO353_20665at 4535.160 kb on - strand, within AO353_20665at 4535.163 kb on + strand, within AO353_20665at 4535.163 kb on + strand, within AO353_20665at 4535.163 kb on + strand, within AO353_20665at 4535.163 kb on + strand, within AO353_20665at 4535.163 kb on + strand, within AO353_20665at 4535.163 kb on + strand, within AO353_20665at 4535.163 kb on + strand, within AO353_20665at 4535.163 kb on + strand, within AO353_20665at 4535.163 kb on + strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.164 kb on - strand, within AO353_20665at 4535.326 kb on + strand, within AO353_20665at 4535.374 kb on + strandat 4535.374 kb on + strandat 4535.374 kb on + strandat 4535.374 kb on + strandat 4535.390 kb on + strandat 4535.390 kb on + strandat 4535.397 kb on + strandat 4535.441 kb on + strandat 4535.454 kb on + strandat 4535.454 kb on + strandat 4535.454 kb on + strandat 4535.454 kb on + strandat 4535.454 kb on + strandat 4535.454 kb on + strandat 4535.454 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
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4,533,817 + -0.7
4,533,817 + -1.1
4,533,817 + -0.6
4,533,818 + -0.2
4,533,818 - -0.5
4,533,819 + +0.4
4,533,819 + +0.5
4,533,819 + -0.8
4,533,819 + +1.4
4,533,819 + -0.0
4,533,819 + +0.7
4,533,819 + +0.2
4,533,819 + -0.7
4,533,819 + +0.2
4,533,819 + +3.8
4,533,820 - -1.3
4,533,820 - -1.2
4,533,820 - -0.5
4,533,820 - -0.9
4,533,820 - -1.0
4,533,820 - -1.4
4,533,820 - -0.2
4,533,820 - +0.2
4,533,820 - -0.2
4,533,820 - -2.0
4,533,820 - +1.3
4,533,820 - -1.2
4,533,836 + -0.6
4,533,836 + -0.1
4,533,837 - -0.8
4,533,837 - +0.8
4,533,866 + +0.7
4,533,866 + +1.0
4,533,866 + +0.3
4,533,867 - -0.1
4,533,867 - +0.4
4,533,867 - +1.0
4,533,867 - -0.7
4,533,868 + +0.8
4,533,868 + +0.6
4,533,868 + -0.2
4,533,868 + +0.6
4,533,868 + -0.4
4,533,869 - +0.4
4,533,869 - +1.1
4,533,869 - -1.0
4,533,869 - +0.4
4,533,873 - +1.2
4,533,873 - -1.1
4,533,930 + +0.2
4,533,931 - +0.1
4,533,991 + AO353_20660 0.12 -0.2
4,533,992 - AO353_20660 0.13 +1.1
4,534,248 + AO353_20660 0.44 -0.8
4,534,249 - AO353_20660 0.44 -0.0
4,534,249 - AO353_20660 0.44 +0.4
4,534,617 + AO353_20660 0.88 -1.7
4,534,617 + AO353_20660 0.88 -0.0
4,534,618 - AO353_20660 0.88 -0.4
4,534,618 - AO353_20660 0.88 +0.8
4,534,618 - AO353_20660 0.88 -0.3
4,534,618 - AO353_20660 0.88 -1.0
4,534,635 + -0.2
4,534,665 + +0.4
4,534,665 + -1.1
4,534,665 + -0.2
4,534,666 - -1.0
4,534,666 - -0.5
4,534,666 - -1.3
4,534,666 - +1.4
4,534,666 - -0.5
4,534,872 + AO353_20665 0.15 -2.3
4,534,872 + AO353_20665 0.15 -0.5
4,534,872 + AO353_20665 0.15 +0.3
4,534,872 + AO353_20665 0.15 -1.4
4,534,872 + AO353_20665 0.15 -2.4
4,534,873 - AO353_20665 0.16 -1.4
4,534,873 - AO353_20665 0.16 -2.2
4,534,873 - AO353_20665 0.16 -1.0
4,534,873 - AO353_20665 0.16 -1.3
4,535,062 - AO353_20665 0.46 -1.7
4,535,073 + AO353_20665 0.48 -0.5
4,535,073 + AO353_20665 0.48 -1.2
4,535,073 + AO353_20665 0.48 -1.7
4,535,073 + AO353_20665 0.48 -3.0
4,535,073 + AO353_20665 0.48 -2.6
4,535,073 + AO353_20665 0.48 -2.0
4,535,073 + AO353_20665 0.48 -1.4
4,535,074 - AO353_20665 0.48 -1.8
4,535,074 - AO353_20665 0.48 -0.7
4,535,074 - AO353_20665 0.48 -0.6
4,535,074 - AO353_20665 0.48 -0.8
4,535,074 - AO353_20665 0.48 -0.8
4,535,077 + AO353_20665 0.48 -0.0
4,535,077 + AO353_20665 0.48 -2.4
4,535,077 + AO353_20665 0.48 -2.4
4,535,077 + AO353_20665 0.48 -1.3
4,535,077 + AO353_20665 0.48 -1.2
4,535,077 + AO353_20665 0.48 -3.0
4,535,077 + AO353_20665 0.48 -1.2
4,535,078 - AO353_20665 0.48 -0.5
4,535,078 - AO353_20665 0.48 -1.2
4,535,160 - AO353_20665 0.62 -1.2
4,535,160 - AO353_20665 0.62 -2.2
4,535,160 - AO353_20665 0.62 -0.5
4,535,163 + AO353_20665 0.62 +0.2
4,535,163 + AO353_20665 0.62 -2.4
4,535,163 + AO353_20665 0.62 -2.0
4,535,163 + AO353_20665 0.62 -2.9
4,535,163 + AO353_20665 0.62 -0.2
4,535,163 + AO353_20665 0.62 -0.2
4,535,163 + AO353_20665 0.62 -1.3
4,535,163 + AO353_20665 0.62 -2.9
4,535,163 + AO353_20665 0.62 -3.6
4,535,164 - AO353_20665 0.62 -1.7
4,535,164 - AO353_20665 0.62 +0.8
4,535,164 - AO353_20665 0.62 -1.0
4,535,164 - AO353_20665 0.62 -0.0
4,535,164 - AO353_20665 0.62 -2.9
4,535,164 - AO353_20665 0.62 -2.5
4,535,164 - AO353_20665 0.62 -2.2
4,535,164 - AO353_20665 0.62 -1.5
4,535,164 - AO353_20665 0.62 -1.9
4,535,164 - AO353_20665 0.62 -3.2
4,535,326 + AO353_20665 0.88 -2.1
4,535,374 + -0.2
4,535,374 + +0.8
4,535,374 + -2.7
4,535,374 + -0.8
4,535,390 + -0.7
4,535,390 + +0.6
4,535,397 + +0.2
4,535,441 + -0.4
4,535,454 + +0.4
4,535,454 + +0.2
4,535,454 + +0.2
4,535,454 + -0.8
4,535,454 + -0.2
4,535,454 + -0.6
4,535,454 + +0.1

Or see this region's nucleotide sequence