Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19045

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
4,180,270	+				-0.8
4,180,271	-				+0.3
4,180,286	-				-0.9
4,180,286	-				-1.6
4,180,302	+				+0.4
4,180,303	-				-0.1
4,180,303	-				-2.1
4,180,303	-				-1.4
4,180,303	-				-0.4
4,180,303	-				+0.0
4,180,303	-				-0.7
4,180,364	+				-1.3
4,180,364	+				-0.9
4,180,365	-				-1.7
4,180,365	-				-1.1
4,180,365	-				-0.6
4,180,365	-				+1.9
4,180,365	-				+1.1
4,180,430	+				-0.2
4,180,442	-				-2.0
4,180,477	+				-0.2
4,180,478	-				+0.2
4,180,601	+		AO353_19035	0.37	+0.4
4,180,601	+		AO353_19035	0.37	+0.3
4,180,601	+		AO353_19035	0.37	+1.9
4,180,602	-		AO353_19035	0.38	-1.1
4,180,602	-		AO353_19035	0.38	-0.5
4,180,602	-		AO353_19035	0.38	+1.4
4,180,643	-		AO353_19035	0.47	-1.8
4,180,675	+		AO353_19035	0.54	+0.2
4,180,676	-		AO353_19035	0.55	-0.6
4,180,676	-		AO353_19035	0.55	-0.9
4,180,684	+		AO353_19035	0.56	+0.1
4,180,684	+		AO353_19035	0.56	-0.5
4,180,684	+		AO353_19035	0.56	-0.0
4,180,685	-		AO353_19035	0.57	+0.2
4,180,685	-		AO353_19035	0.57	+1.3
4,180,753	+				+0.9
4,180,753	+		AO353_19035	0.72	+1.2
4,180,754	-		AO353_19035	0.73	+0.1
4,180,754	-		AO353_19035	0.73	-0.4
4,180,754	-		AO353_19035	0.73	+0.2
4,180,781	+		AO353_19035	0.79	-0.4
4,180,781	+		AO353_19035	0.79	-1.0
4,180,781	+		AO353_19035	0.79	+0.7
4,180,782	-		AO353_19035	0.79	-2.4
4,180,782	-		AO353_19035	0.79	+0.4
4,180,782	-		AO353_19035	0.79	+0.6
4,180,805	+		AO353_19035	0.84	+0.6
4,180,806	-		AO353_19035	0.85	-0.1
4,180,806	-		AO353_19035	0.85	+0.2
4,180,806	-		AO353_19035	0.85	+0.9
4,180,827	+		AO353_19035	0.90	-1.1
4,180,828	-				-2.3
4,180,828	-				-0.4
4,180,828	-				-0.4
4,180,859	+				-2.4
4,180,859	+				-0.2
4,180,859	+				+0.4
4,180,859	+				+1.2
4,180,859	+				-1.4
4,180,860	-				+1.9
4,180,860	-				+0.7
4,180,860	-				-0.1
4,180,860	-				+0.7
4,180,860	-				-1.4
4,180,918	-		AO353_19040	0.12	-1.7
4,180,919	+		AO353_19040	0.13	-0.6
4,180,919	+		AO353_19040	0.13	+1.3
4,180,919	+		AO353_19040	0.13	+1.1
4,180,919	+		AO353_19040	0.13	+1.3
4,180,919	+		AO353_19040	0.13	-0.1
4,180,919	+		AO353_19040	0.13	+0.1
4,180,919	+		AO353_19040	0.13	+0.9
4,180,919	+		AO353_19040	0.13	+1.9
4,180,919	+		AO353_19040	0.13	-0.7
4,180,919	+		AO353_19040	0.13	-0.3
4,180,919	+		AO353_19040	0.13	-1.8
4,180,919	+		AO353_19040	0.13	+1.9
4,180,919	+		AO353_19040	0.13	-0.4
4,180,919	+		AO353_19040	0.13	-0.8
4,180,919	+		AO353_19040	0.13	-1.4
4,180,919	+		AO353_19040	0.13	-0.1
4,180,919	+		AO353_19040	0.13	+1.1
4,180,919	+		AO353_19040	0.13	+1.3
4,180,919	+		AO353_19040	0.13	-0.7
4,180,919	+		AO353_19040	0.13	+1.4
4,180,919	+		AO353_19040	0.13	+0.9
4,180,920	-		AO353_19040	0.13	-0.3
4,180,920	-		AO353_19040	0.13	+0.7
4,180,920	-		AO353_19040	0.13	-1.6
4,180,920	-		AO353_19040	0.13	-0.2
4,180,920	-		AO353_19040	0.13	-0.4
4,180,920	-				+1.9
4,180,920	-		AO353_19040	0.13	+0.1
4,180,920	-		AO353_19040	0.13	-1.3
4,180,920	-		AO353_19040	0.13	+0.0
4,180,920	-		AO353_19040	0.13	+0.1
4,180,920	-		AO353_19040	0.13	+0.6
4,180,920	-		AO353_19040	0.13	-1.2
4,180,920	-		AO353_19040	0.13	+0.1
4,180,920	-		AO353_19040	0.13	+0.3
4,180,920	-		AO353_19040	0.13	+0.5
4,180,920	-		AO353_19040	0.13	+0.3
4,180,920	-		AO353_19040	0.13	-0.4
4,181,167	+		AO353_19040	0.77	+1.1
4,181,167	+		AO353_19040	0.77	+0.6
4,181,167	+		AO353_19040	0.77	-1.3
4,181,168	-		AO353_19040	0.77	+1.3
4,181,168	-		AO353_19040	0.77	-0.1
4,181,168	-		AO353_19040	0.77	-0.3
4,181,326	+				+1.3
4,181,326	+				-0.7
4,181,326	+				-0.3
4,181,327	-				-0.6
4,181,421	+		AO353_19045	0.17	+0.6
4,181,454	+		AO353_19045	0.21	+2.1
4,181,471	+		AO353_19045	0.23	+0.3
4,181,472	-		AO353_19045	0.23	+0.2
4,181,472	-		AO353_19045	0.23	+0.3
4,181,472	-		AO353_19045	0.23	-0.1
4,181,657	+		AO353_19045	0.42	+1.0
4,181,658	-		AO353_19045	0.42	-0.3
4,181,658	-		AO353_19045	0.42	+0.8
4,181,658	-		AO353_19045	0.42	-0.2
4,181,874	+		AO353_19045	0.64	-0.5
4,181,874	+		AO353_19045	0.64	-0.8
4,181,874	+		AO353_19045	0.64	+1.2
4,181,874	+		AO353_19045	0.64	-0.1
4,181,874	+		AO353_19045	0.64	-0.4
4,181,875	-		AO353_19045	0.65	+0.2
4,181,875	-		AO353_19045	0.65	+0.9
4,182,012	+		AO353_19045	0.79	+0.2
4,182,054	+		AO353_19045	0.83	+0.4
4,182,069	+		AO353_19045	0.85	+0.6
4,182,069	+		AO353_19045	0.85	+1.1
4,182,069	+		AO353_19045	0.85	+1.3
4,182,069	+		AO353_19045	0.85	+1.9
4,182,069	+		AO353_19045	0.85	-1.3
4,182,070	-		AO353_19045	0.85	+0.4
4,182,078	+		AO353_19045	0.86	-1.1
4,182,086	+		AO353_19045	0.87	+0.3
4,182,087	-		AO353_19045	0.87	-0.2
4,182,087	-		AO353_19045	0.87	-0.6
4,182,087	-		AO353_19045	0.87	+0.4
4,182,115	-		AO353_19045	0.90	-1.1
4,182,115	-		AO353_19045	0.90	-1.6
4,182,115	-		AO353_19045	0.90	+0.7
4,182,177	+				-1.1
4,182,177	+				-0.9
4,182,178	-				-0.0
4,182,178	-				+0.3
4,182,178	-				-1.0
4,182,178	-				-0.1
4,182,178	-				+1.9
4,182,178	-				+1.3
4,182,214	-				-0.3
4,182,214	-				-1.0
4,182,261	-				-0.1
4,182,261	-				-0.4
4,182,261	-				-0.3
4,182,321	+				+0.4
4,182,321	+				-1.1
4,182,322	-				-1.6
4,182,431	+		AO353_19050	0.21	+0.1
4,182,480	-		AO353_19050	0.26	-0.9
4,182,576	+		AO353_19050	0.37	+0.9
4,182,576	+		AO353_19050	0.37	-1.9
4,182,577	-		AO353_19050	0.37	+0.5
4,182,762	+		AO353_19050	0.58	+0.3
4,182,763	-		AO353_19050	0.58	+0.0
4,182,763	-		AO353_19050	0.58	-0.4
4,182,763	-		AO353_19050	0.58	+0.2
4,182,956	+		AO353_19050	0.79	-0.5
4,182,957	-		AO353_19050	0.79	+0.4
4,182,975	-		AO353_19050	0.81	-2.1
4,183,143	+				+0.9
4,183,144	-				-0.3
4,183,144	-				+0.1
4,183,195	+				+0.9
4,183,206	-				-0.4
4,183,206	-				+0.3