Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17925

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
3,946,419	+		AO353_17920	0.26	-0.1
3,946,465	+		AO353_17920	0.29	-0.3
3,946,465	+		AO353_17920	0.29	-0.6
3,946,465	+		AO353_17920	0.29	+0.4
3,946,465	+		AO353_17920	0.29	-0.6
3,946,465	+		AO353_17920	0.29	+0.4
3,946,465	+		AO353_17920	0.29	-1.1
3,946,466	-		AO353_17920	0.29	-1.0
3,946,466	-		AO353_17920	0.29	+0.3
3,946,466	-		AO353_17920	0.29	-1.9
3,946,466	-		AO353_17920	0.29	-0.6
3,946,466	-		AO353_17920	0.29	+2.6
3,946,466	-		AO353_17920	0.29	-0.6
3,946,466	-		AO353_17920	0.29	-1.5
3,946,584	-		AO353_17920	0.38	+0.0
3,946,653	-		AO353_17920	0.43	+1.0
3,946,657	+		AO353_17920	0.43	-1.4
3,946,657	+		AO353_17920	0.43	+0.6
3,946,657	+		AO353_17920	0.43	+0.2
3,946,658	-		AO353_17920	0.43	+0.7
3,946,658	-		AO353_17920	0.43	-0.6
3,946,658	-		AO353_17920	0.43	+0.4
3,946,658	-		AO353_17920	0.43	-1.0
3,946,658	-		AO353_17920	0.43	+0.7
3,946,671	+		AO353_17920	0.44	-1.4
3,946,671	+		AO353_17920	0.44	+0.3
3,946,671	+		AO353_17920	0.44	-1.1
3,946,671	+		AO353_17920	0.44	+0.7
3,946,671	+		AO353_17920	0.44	+0.1
3,946,671	+		AO353_17920	0.44	-0.8
3,946,672	-		AO353_17920	0.44	+0.0
3,946,672	-		AO353_17920	0.44	+0.0
3,946,672	-		AO353_17920	0.44	+1.0
3,946,672	-		AO353_17920	0.44	-0.8
3,946,672	-		AO353_17920	0.44	+0.4
3,946,672	-		AO353_17920	0.44	-1.6
3,946,672	-		AO353_17920	0.44	-0.2
3,946,672	-		AO353_17920	0.44	-1.8
3,946,672	-		AO353_17920	0.44	-1.0
3,946,673	+		AO353_17920	0.44	-0.3
3,946,673	+		AO353_17920	0.44	+0.3
3,946,674	-		AO353_17920	0.44	-1.2
3,946,674	-		AO353_17920	0.44	-0.4
3,946,718	+		AO353_17920	0.48	-0.2
3,946,719	-		AO353_17920	0.48	+0.2
3,946,784	+		AO353_17920	0.52	-0.6
3,946,784	+		AO353_17920	0.52	-0.9
3,946,784	+		AO353_17920	0.52	-1.0
3,946,785	-		AO353_17920	0.52	-0.7
3,946,940	+		AO353_17920	0.64	-1.8
3,946,941	-		AO353_17920	0.64	-0.8
3,947,048	-		AO353_17920	0.71	+0.8
3,947,048	-		AO353_17920	0.71	+0.7
3,947,085	+		AO353_17920	0.74	+1.0
3,947,085	+		AO353_17920	0.74	-0.0
3,947,085	+				+1.0
3,947,086	-		AO353_17920	0.74	-0.3
3,947,086	-		AO353_17920	0.74	+0.1
3,947,086	-		AO353_17920	0.74	-0.1
3,947,086	-		AO353_17920	0.74	-1.4
3,947,086	-		AO353_17920	0.74	-1.4
3,947,086	-		AO353_17920	0.74	-0.6
3,947,314	+				-0.6
3,947,315	-				+1.0
3,947,315	-				+0.0
3,947,315	-				+0.8
3,947,329	+				-2.2
3,947,330	-				-0.6
3,947,330	-				-0.6
3,947,330	-				+2.4
3,947,330	-				-0.2
3,947,332	+				+0.3
3,947,333	-				+3.0
3,947,375	+				+1.1
3,947,375	+				-0.9
3,947,375	+				-0.3
3,947,375	+				+0.6
3,947,375	+				-0.3
3,947,375	+				+0.2
3,947,375	+				+0.0
3,947,375	+				-1.3
3,947,376	-				-0.8
3,947,376	-				+3.0
3,947,376	-				+1.4
3,947,376	-				-0.8
3,947,376	-				+1.0
3,947,376	-				+1.8
3,947,376	-				+1.6
3,947,376	-				+0.2
3,947,376	-				+0.4
3,947,376	-				-0.7
3,947,380	+				+0.3
3,947,380	+				+0.1
3,947,380	+				-0.9
3,947,381	-				+2.3
3,947,381	-				-0.9
3,947,420	+				-0.3
3,947,420	+				+0.8
3,947,421	-				-0.3
3,947,421	-				+1.0
3,947,421	-				-0.7
3,947,441	+				+0.5
3,947,441	+				-1.5
3,947,442	-				-0.8
3,947,442	-				+0.0
3,947,442	-				+0.4
3,947,515	-		AO353_17925	0.14	+0.2
3,947,560	+		AO353_17925	0.21	-0.7
3,947,560	+		AO353_17925	0.21	+0.0
3,947,560	+		AO353_17925	0.21	-0.7
3,947,560	+		AO353_17925	0.21	+0.2
3,947,560	+		AO353_17925	0.21	+1.0
3,947,561	-		AO353_17925	0.21	-1.6
3,947,561	-		AO353_17925	0.21	-0.4
3,947,561	-		AO353_17925	0.21	+1.0
3,947,561	-		AO353_17925	0.21	-1.0
3,947,631	-		AO353_17925	0.31	-0.6
3,947,746	-		AO353_17925	0.48	-0.9
3,947,746	-		AO353_17925	0.48	+0.5
3,947,807	+		AO353_17925	0.57	-1.4
3,947,807	+		AO353_17925	0.57	-1.3
3,947,807	+		AO353_17925	0.57	-1.4
3,947,808	-		AO353_17925	0.57	+0.8
3,947,808	-		AO353_17925	0.57	+0.8
3,947,808	-		AO353_17925	0.57	-0.6
3,947,966	+		AO353_17925	0.80	-0.9
3,947,966	+		AO353_17925	0.80	+0.6
3,947,966	+		AO353_17925	0.80	+1.6
3,947,966	+		AO353_17925	0.80	-0.6
3,947,966	+		AO353_17925	0.80	-0.8
3,947,967	-		AO353_17925	0.80	-1.2
3,947,967	-		AO353_17925	0.80	-0.6
3,947,967	-		AO353_17925	0.80	-1.2
3,948,082	+				-0.1
3,948,082	+				-0.1
3,948,083	-				+0.3
3,948,083	-				-0.8
3,948,110	-				+1.2
3,948,113	+				+1.0
3,948,114	-				-0.6
3,948,114	-				+0.4
3,948,114	-				+0.6
3,948,114	-				-0.2
3,948,114	-				-0.2
3,948,191	+				+0.4
3,948,191	+				+0.3
3,948,192	-				+0.6
3,948,192	-				-1.8
3,948,207	+				-0.0
3,948,299	-		AO353_17930	0.12	+1.0
3,948,348	+		AO353_17930	0.25	+0.6
3,948,348	+		AO353_17930	0.25	+1.3
3,948,348	+		AO353_17930	0.25	-0.6
3,948,349	-		AO353_17930	0.25	+0.3
3,948,349	-		AO353_17930	0.25	+1.0
3,948,349	-		AO353_17930	0.25	+1.6
3,948,349	-		AO353_17930	0.25	-1.3
3,948,390	+		AO353_17930	0.36	+0.4
3,948,390	+		AO353_17930	0.36	+0.5
3,948,390	+		AO353_17930	0.36	+0.2
3,948,430	+		AO353_17930	0.47	+0.0
3,948,522	+		AO353_17930	0.71	-1.5
3,948,522	+		AO353_17930	0.71	+0.7
3,948,523	-		AO353_17930	0.72	-0.6
3,948,643	-				-1.3
3,948,652	-				+1.3
3,948,664	-				+0.4
3,948,674	+				-0.8
3,948,674	+				-0.1
3,948,674	+				-0.3
3,948,675	-				+1.1
3,948,675	-				-0.8
3,948,675	-				+1.0
3,948,675	-				-0.3
3,948,816	+		AO353_17935	0.20	+1.6
3,948,877	+		AO353_17935	0.29	+0.4
3,948,877	+		AO353_17935	0.29	-0.4
3,948,877	+		AO353_17935	0.29	+0.8
3,948,877	+				+0.4