Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17870

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
3,934,327	+		AO353_17865	0.23	-0.8
3,934,327	+		AO353_17865	0.23	+2.4
3,934,327	+		AO353_17865	0.23	-0.5
3,934,327	+		AO353_17865	0.23	-0.3
3,934,327	+		AO353_17865	0.23	-0.6
3,934,327	+		AO353_17865	0.23	-1.3
3,934,327	+		AO353_17865	0.23	-0.1
3,934,327	+		AO353_17865	0.23	-0.9
3,934,328	-		AO353_17865	0.23	+0.9
3,934,328	-		AO353_17865	0.23	-1.0
3,934,409	+		AO353_17865	0.32	+0.3
3,934,409	+		AO353_17865	0.32	-1.0
3,934,409	+		AO353_17865	0.32	+0.0
3,934,409	+		AO353_17865	0.32	-0.8
3,934,409	+		AO353_17865	0.32	+1.2
3,934,409	+		AO353_17865	0.32	+0.6
3,934,409	+		AO353_17865	0.32	-0.8
3,934,409	+		AO353_17865	0.32	-0.6
3,934,409	+		AO353_17865	0.32	+2.0
3,934,409	+		AO353_17865	0.32	-1.1
3,934,409	+		AO353_17865	0.32	+0.2
3,934,409	+		AO353_17865	0.32	+0.0
3,934,410	-		AO353_17865	0.32	-0.1
3,934,410	-		AO353_17865	0.32	+0.0
3,934,410	-		AO353_17865	0.32	-0.3
3,934,410	-		AO353_17865	0.32	+1.4
3,934,410	-		AO353_17865	0.32	-0.1
3,934,410	-		AO353_17865	0.32	-0.3
3,934,410	-		AO353_17865	0.32	-0.1
3,934,410	-		AO353_17865	0.32	-0.8
3,934,421	+		AO353_17865	0.33	+2.0
3,934,421	+		AO353_17865	0.33	-0.8
3,934,421	+		AO353_17865	0.33	-0.6
3,934,421	+		AO353_17865	0.33	-0.3
3,934,421	+		AO353_17865	0.33	-1.9
3,934,422	-		AO353_17865	0.33	+0.4
3,934,422	-		AO353_17865	0.33	+0.3
3,934,422	-		AO353_17865	0.33	-0.4
3,934,422	-		AO353_17865	0.33	+1.3
3,934,422	-		AO353_17865	0.33	+0.8
3,934,422	-		AO353_17865	0.33	-0.8
3,934,422	-		AO353_17865	0.33	-0.8
3,934,422	-		AO353_17865	0.33	-0.8
3,934,422	-		AO353_17865	0.33	-0.6
3,934,606	+				+0.4
3,934,682	+		AO353_17865	0.61	+0.2
3,934,682	+		AO353_17865	0.61	-0.7
3,934,682	+				+0.4
3,934,682	+		AO353_17865	0.61	+0.2
3,934,682	+		AO353_17865	0.61	-1.0
3,934,683	-		AO353_17865	0.61	-0.9
3,934,683	-		AO353_17865	0.61	-1.3
3,934,683	-		AO353_17865	0.61	+1.0
3,934,683	-		AO353_17865	0.61	-1.1
3,934,683	-		AO353_17865	0.61	+0.7
3,934,705	+		AO353_17865	0.64	-1.9
3,934,705	+		AO353_17865	0.64	-0.3
3,934,705	+		AO353_17865	0.64	-0.7
3,934,705	+		AO353_17865	0.64	-0.5
3,934,706	-		AO353_17865	0.64	+0.7
3,934,727	+		AO353_17865	0.66	+1.0
3,934,728	-		AO353_17865	0.66	+0.0
3,934,728	-		AO353_17865	0.66	-1.5
3,934,728	-		AO353_17865	0.66	-0.6
3,934,728	-		AO353_17865	0.66	+2.0
3,934,815	+		AO353_17865	0.75	+1.3
3,934,942	+		AO353_17865	0.89	-1.4
3,934,943	-		AO353_17865	0.89	+0.0
3,934,943	-		AO353_17865	0.89	-0.6
3,934,943	-		AO353_17865	0.89	-1.8
3,934,943	-		AO353_17865	0.89	+2.6
3,935,040	-				+1.0
3,935,040	-				-0.6
3,935,138	+				-1.4
3,935,138	+				-0.7
3,935,138	+				-0.4
3,935,139	-				-0.3
3,935,139	-				-0.0
3,935,145	+				+0.7
3,935,145	+				-0.7
3,935,145	+				-1.7
3,935,146	-				-1.2
3,935,146	-				+0.3
3,935,146	-				-0.8
3,935,238	+				-0.9
3,935,238	+				+0.0
3,935,238	+				-1.1
3,935,239	-				+0.4
3,935,239	-				-0.3
3,935,314	-		AO353_17870	0.13	+0.2
3,935,387	-		AO353_17870	0.25	+1.6
3,935,387	-		AO353_17870	0.25	-0.7
3,935,452	+		AO353_17870	0.36	+1.6
3,935,453	-		AO353_17870	0.36	-1.1
3,935,453	-				+2.0
3,935,625	+		AO353_17870	0.65	-0.3
3,935,685	+		AO353_17870	0.75	+0.1
3,935,686	-		AO353_17870	0.76	+0.4
3,935,743	+		AO353_17870	0.85	-0.3
3,935,743	+		AO353_17870	0.85	+0.0
3,935,743	+		AO353_17870	0.85	+1.6
3,935,743	+		AO353_17870	0.85	+1.5
3,935,743	+		AO353_17870	0.85	+0.4
3,935,744	-		AO353_17870	0.85	-0.3
3,935,802	+				-1.4
3,935,803	-				-0.4
3,935,803	-				-0.1
3,935,803	-				-0.3
3,935,803	-				-0.9
3,935,847	+				-2.3
3,935,847	+				+0.1
3,935,847	+				+0.6
3,935,847	+				+0.2
3,935,847	+				+1.4
3,935,853	+				-1.0
3,935,853	+				-1.0
3,935,853	+				+0.0
3,935,853	+				-1.1
3,935,853	+				-0.6
3,935,854	-				-0.3
3,935,854	-				-0.8
3,935,854	-				-0.8
3,935,854	-				-0.3
3,935,854	-				+0.7
3,935,854	-				-0.3
3,935,854	-				+1.4
3,935,854	-				-1.0
3,935,871	+				+0.4
3,935,871	+				-0.6
3,935,872	-				+0.0
3,935,872	-				+0.4
3,935,956	+				-0.5
3,935,956	+				+0.7
3,935,994	+				-0.1
3,935,995	-				-1.4
3,935,995	-				+0.4
3,936,009	+				-1.6
3,936,010	-				+1.0
3,936,010	-				-1.8
3,936,010	-				-2.2
3,936,070	+				+1.0
3,936,070	+				-0.8
3,936,071	-				-1.4
3,936,248	+		AO353_17875	0.30	-1.0
3,936,248	+		AO353_17875	0.30	+0.0
3,936,248	+		AO353_17875	0.30	-2.2
3,936,249	-		AO353_17875	0.30	-0.1
3,936,249	-		AO353_17875	0.30	-0.6
3,936,249	-		AO353_17875	0.30	-0.6
3,936,249	-		AO353_17875	0.30	+0.0
3,936,251	+		AO353_17875	0.31	-0.3
3,936,251	+		AO353_17875	0.31	+1.0
3,936,251	+		AO353_17875	0.31	+0.7
3,936,251	+		AO353_17875	0.31	-0.8
3,936,251	+		AO353_17875	0.31	-1.4
3,936,252	-		AO353_17875	0.31	-1.4
3,936,252	-		AO353_17875	0.31	+0.4
3,936,252	-		AO353_17875	0.31	+0.1
3,936,252	-		AO353_17875	0.31	+0.2
3,936,252	-		AO353_17875	0.31	-0.6
3,936,252	-		AO353_17875	0.31	-0.2
3,936,252	-		AO353_17875	0.31	+0.3
3,936,252	-		AO353_17875	0.31	-2.1
3,936,338	-		AO353_17875	0.50	+0.2
3,936,496	+		AO353_17875	0.85	+0.0
3,936,496	+		AO353_17875	0.85	+0.3
3,936,497	-		AO353_17875	0.85	-1.7
3,936,497	-		AO353_17875	0.85	-0.1
3,936,573	+				-0.6
3,936,573	+				-0.7
3,936,574	-				+0.2
3,936,574	-				+0.9
3,936,574	-				+1.0
3,936,574	-				-1.0
3,936,576	+				+0.2
3,936,576	+				+0.4
3,936,576	+				+0.6
3,936,576	+				+0.6
3,936,582	+				-0.2
3,936,582	+				+0.1
3,936,583	-				-0.6
3,936,583	-				+0.0
3,936,583	-				+0.4
3,936,583	-				+1.0
3,936,583	-				-1.5
3,936,583	-				+0.7
3,936,601	+				-0.0
3,936,601	+				+0.7
3,936,601	+				-0.6
3,936,602	-				-0.1
3,936,602	-				-0.6
3,936,602	-				-1.4
3,936,602	-				+1.4
3,936,696	+				-0.1
3,936,696	+				+2.4
3,936,696	+				-0.8
3,936,696	+				+0.4
3,936,696	+				-0.1
3,936,697	-				+0.3
3,936,697	-				+0.1
3,936,697	-				+0.0
3,936,697	-				+0.9
3,936,797	+		AO353_17880	0.16	-1.0
3,936,798	-		AO353_17880	0.16	+0.2
3,936,798	-		AO353_17880	0.16	+2.3