Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_17605 and AO353_17610 are separated by 149 nucleotides AO353_17610 and AO353_17615 are separated by 146 nucleotides AO353_17615 and AO353_17620 overlap by 32 nucleotides
AO353_17605: AO353_17605 - aminomethyltransferase, at 3,881,213 to 3,882,154
_17605
AO353_17610: AO353_17610 - hypothetical protein, at 3,882,304 to 3,882,558
_17610
AO353_17615: AO353_17615 - hypothetical protein, at 3,882,705 to 3,883,154
_17615
AO353_17620: AO353_17620 - L-aspartate oxidase, at 3,883,123 to 3,884,739
_17620
Position (kb)
3882
3883
3884 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3882.190 kb on + strand at 3882.190 kb on + strand at 3882.190 kb on + strand at 3882.191 kb on - strand at 3882.191 kb on - strand at 3882.191 kb on - strand at 3882.214 kb on - strand at 3882.274 kb on + strand at 3882.274 kb on + strand at 3882.274 kb on + strand at 3882.274 kb on + strand at 3882.275 kb on - strand at 3882.275 kb on - strand at 3882.275 kb on - strand at 3882.275 kb on - strand at 3882.275 kb on - strand at 3882.276 kb on + strand at 3882.276 kb on + strand at 3882.276 kb on + strand at 3882.276 kb on + strand at 3882.276 kb on + strand at 3882.276 kb on + strand at 3882.276 kb on + strand at 3882.276 kb on + strand at 3882.276 kb on + strand at 3882.287 kb on + strand at 3882.287 kb on + strand at 3882.288 kb on - strand at 3882.644 kb on - strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.700 kb on + strand at 3882.701 kb on - strand at 3882.701 kb on - strand at 3882.701 kb on - strand at 3882.765 kb on + strand, within AO353_17615 at 3882.766 kb on - strand, within AO353_17615 at 3882.766 kb on - strand, within AO353_17615 at 3882.766 kb on - strand, within AO353_17615 at 3882.766 kb on - strand, within AO353_17615 at 3882.766 kb on - strand, within AO353_17615 at 3882.766 kb on - strand, within AO353_17615 at 3882.812 kb on + strand, within AO353_17615 at 3882.812 kb on + strand, within AO353_17615 at 3882.812 kb on + strand, within AO353_17615 at 3882.841 kb on + strand, within AO353_17615 at 3882.889 kb on + strand, within AO353_17615 at 3882.889 kb on + strand, within AO353_17615 at 3882.889 kb on + strand, within AO353_17615 at 3882.889 kb on + strand, within AO353_17615 at 3882.889 kb on + strand, within AO353_17615 at 3882.890 kb on - strand, within AO353_17615 at 3882.890 kb on - strand, within AO353_17615 at 3883.133 kb on + strand at 3883.133 kb on + strand at 3883.134 kb on - strand at 3883.134 kb on - strand at 3883.152 kb on + strand at 3883.152 kb on + strand at 3883.152 kb on + strand at 3883.152 kb on + strand at 3883.152 kb on + strand at 3883.152 kb on + strand at 3883.152 kb on + strand at 3883.153 kb on - strand at 3883.153 kb on - strand at 3883.196 kb on + strand at 3883.196 kb on + strand at 3883.196 kb on + strand at 3883.196 kb on + strand at 3883.196 kb on + strand at 3883.196 kb on + strand at 3883.196 kb on + strand at 3883.196 kb on + strand at 3883.196 kb on + strand at 3883.197 kb on - strand at 3883.197 kb on - strand at 3883.197 kb on - strand at 3883.197 kb on - strand at 3883.197 kb on - strand at 3883.197 kb on - strand at 3883.266 kb on + strand at 3883.298 kb on + strand, within AO353_17620 at 3883.298 kb on + strand, within AO353_17620 at 3883.298 kb on + strand, within AO353_17620 at 3883.298 kb on + strand, within AO353_17620 at 3883.298 kb on + strand, within AO353_17620 at 3883.298 kb on + strand, within AO353_17620 at 3883.298 kb on + strand, within AO353_17620 at 3883.298 kb on + strand, within AO353_17620 at 3883.299 kb on - strand, within AO353_17620 at 3883.299 kb on - strand, within AO353_17620 at 3883.299 kb on - strand, within AO353_17620 at 3883.299 kb on - strand, within AO353_17620 at 3883.299 kb on - strand, within AO353_17620 at 3883.299 kb on - strand, within AO353_17620 at 3883.299 kb on - strand, within AO353_17620 at 3883.307 kb on + strand, within AO353_17620 at 3883.307 kb on + strand, within AO353_17620 at 3883.307 kb on + strand, within AO353_17620 at 3883.307 kb on + strand, within AO353_17620 at 3883.307 kb on + strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.308 kb on - strand, within AO353_17620 at 3883.368 kb on + strand, within AO353_17620 at 3883.369 kb on - strand, within AO353_17620 at 3883.369 kb on - strand, within AO353_17620 at 3883.391 kb on + strand, within AO353_17620 at 3883.391 kb on + strand, within AO353_17620 at 3883.391 kb on + strand, within AO353_17620 at 3883.391 kb on + strand, within AO353_17620 at 3883.391 kb on + strand, within AO353_17620 at 3883.391 kb on + strand, within AO353_17620 at 3883.391 kb on + strand, within AO353_17620 at 3883.392 kb on - strand, within AO353_17620 at 3883.392 kb on - strand, within AO353_17620 at 3883.392 kb on - strand, within AO353_17620 at 3883.392 kb on - strand, within AO353_17620 at 3883.547 kb on + strand, within AO353_17620 at 3883.547 kb on + strand, within AO353_17620 at 3883.548 kb on - strand, within AO353_17620 at 3883.548 kb on - strand, within AO353_17620 at 3883.628 kb on + strand, within AO353_17620 at 3883.628 kb on + strand, within AO353_17620 at 3883.629 kb on - strand, within AO353_17620 at 3883.647 kb on + strand, within AO353_17620 at 3883.647 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.683 kb on + strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.684 kb on - strand, within AO353_17620 at 3883.685 kb on + strand, within AO353_17620 at 3883.685 kb on + strand, within AO353_17620 at 3883.685 kb on + strand, within AO353_17620 at 3883.686 kb on - strand, within AO353_17620 at 3883.686 kb on - strand, within AO353_17620 at 3883.686 kb on - strand, within AO353_17620 at 3883.686 kb on - strand, within AO353_17620 at 3883.686 kb on - strand, within AO353_17620 at 3883.686 kb on - strand, within AO353_17620 at 3883.754 kb on + strand, within AO353_17620 at 3883.754 kb on + strand, within AO353_17620 at 3883.755 kb on - strand, within AO353_17620 at 3883.755 kb on - strand, within AO353_17620 at 3883.755 kb on - strand, within AO353_17620 at 3883.755 kb on - strand, within AO353_17620 at 3883.755 kb on - strand, within AO353_17620 at 3883.755 kb on - strand, within AO353_17620 at 3883.755 kb on - strand, within AO353_17620 at 3883.811 kb on + strand, within AO353_17620 at 3883.811 kb on + strand, within AO353_17620 at 3883.812 kb on - strand, within AO353_17620 at 3883.812 kb on - strand, within AO353_17620 at 3883.995 kb on - strand, within AO353_17620 at 3884.102 kb on + strand, within AO353_17620 at 3884.102 kb on + strand, within AO353_17620 at 3884.102 kb on + strand, within AO353_17620 at 3884.102 kb on + strand, within AO353_17620 at 3884.102 kb on + strand, within AO353_17620 at 3884.103 kb on - strand, within AO353_17620 at 3884.103 kb on - strand, within AO353_17620 at 3884.103 kb on - strand, within AO353_17620 at 3884.103 kb on - strand, within AO353_17620 at 3884.103 kb on - strand, within AO353_17620 at 3884.103 kb on - strand, within AO353_17620 at 3884.108 kb on + strand, within AO353_17620 at 3884.108 kb on + strand, within AO353_17620 at 3884.108 kb on + strand, within AO353_17620 at 3884.108 kb on + strand, within AO353_17620 at 3884.108 kb on + strand, within AO353_17620 at 3884.108 kb on + strand, within AO353_17620 at 3884.108 kb on + strand, within AO353_17620 at 3884.108 kb on + strand, within AO353_17620 at 3884.108 kb on + strand, within AO353_17620 at 3884.109 kb on - strand, within AO353_17620 at 3884.109 kb on - strand, within AO353_17620 at 3884.109 kb on - strand, within AO353_17620 at 3884.109 kb on - strand, within AO353_17620 at 3884.109 kb on - strand, within AO353_17620 at 3884.109 kb on - strand, within AO353_17620
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 3,882,190 + +0.3 3,882,190 + +0.7 3,882,190 + -1.9 3,882,191 - -0.0 3,882,191 - +1.1 3,882,191 - +1.1 3,882,214 - -1.1 3,882,274 + -0.3 3,882,274 + +0.1 3,882,274 + -1.1 3,882,274 + -0.4 3,882,275 - -0.1 3,882,275 - -0.5 3,882,275 - +0.1 3,882,275 - +1.2 3,882,275 - -1.0 3,882,276 + +1.3 3,882,276 + -1.8 3,882,276 + +1.2 3,882,276 + +1.5 3,882,276 + -0.5 3,882,276 + -1.4 3,882,276 + -0.7 3,882,276 + -1.5 3,882,276 + +1.5 3,882,287 + -0.2 3,882,287 + -1.1 3,882,288 - -1.1 3,882,644 - +0.1 3,882,700 + -0.8 3,882,700 + +1.1 3,882,700 + -1.9 3,882,700 + -0.9 3,882,700 + +0.1 3,882,700 + -2.0 3,882,700 + -1.1 3,882,700 + +0.6 3,882,700 + -0.4 3,882,700 + +1.9 3,882,700 + -1.4 3,882,700 + -1.5 3,882,700 + -0.4 3,882,701 - +1.1 3,882,701 - +1.1 3,882,701 - -1.9 3,882,765 + AO353_17615 0.13 -0.2 3,882,766 - AO353_17615 0.14 +1.2 3,882,766 - AO353_17615 0.14 -0.4 3,882,766 - AO353_17615 0.14 -0.5 3,882,766 - AO353_17615 0.14 +0.2 3,882,766 - AO353_17615 0.14 +0.3 3,882,766 - AO353_17615 0.14 +0.1 3,882,812 + AO353_17615 0.24 +2.1 3,882,812 + AO353_17615 0.24 -1.0 3,882,812 + AO353_17615 0.24 -0.9 3,882,841 + AO353_17615 0.30 -0.4 3,882,889 + AO353_17615 0.41 +1.6 3,882,889 + AO353_17615 0.41 +1.5 3,882,889 + AO353_17615 0.41 +0.6 3,882,889 + AO353_17615 0.41 -0.5 3,882,889 + AO353_17615 0.41 -0.1 3,882,890 - AO353_17615 0.41 +1.2 3,882,890 - AO353_17615 0.41 -0.9 3,883,133 + -0.8 3,883,133 + -0.8 3,883,134 - +0.9 3,883,134 - -0.8 3,883,152 + -1.3 3,883,152 + +1.1 3,883,152 + -0.6 3,883,152 + +0.5 3,883,152 + -0.3 3,883,152 + -0.6 3,883,152 + -0.4 3,883,153 - +0.6 3,883,153 - -0.0 3,883,196 + -1.8 3,883,196 + -0.3 3,883,196 + +0.3 3,883,196 + +0.1 3,883,196 + -0.1 3,883,196 + -0.5 3,883,196 + +0.7 3,883,196 + +0.3 3,883,196 + +0.6 3,883,197 - -0.4 3,883,197 - +0.3 3,883,197 - +0.3 3,883,197 - -1.9 3,883,197 - +1.3 3,883,197 - -1.3 3,883,266 + +0.1 3,883,298 + AO353_17620 0.11 -0.2 3,883,298 + AO353_17620 0.11 +1.1 3,883,298 + AO353_17620 0.11 -0.0 3,883,298 + AO353_17620 0.11 -0.8 3,883,298 + AO353_17620 0.11 -1.1 3,883,298 + AO353_17620 0.11 +0.2 3,883,298 + AO353_17620 0.11 +0.2 3,883,298 + AO353_17620 0.11 +0.5 3,883,299 - AO353_17620 0.11 -0.1 3,883,299 - AO353_17620 0.11 +0.2 3,883,299 - AO353_17620 0.11 -1.5 3,883,299 - AO353_17620 0.11 -0.8 3,883,299 - AO353_17620 0.11 -0.1 3,883,299 - AO353_17620 0.11 +0.1 3,883,299 - AO353_17620 0.11 +0.1 3,883,307 + AO353_17620 0.11 +1.1 3,883,307 + AO353_17620 0.11 +1.4 3,883,307 + AO353_17620 0.11 -0.9 3,883,307 + AO353_17620 0.11 -0.9 3,883,307 + AO353_17620 0.11 +0.3 3,883,308 - AO353_17620 0.11 -1.3 3,883,308 - AO353_17620 0.11 -0.9 3,883,308 - AO353_17620 0.11 -0.1 3,883,308 - AO353_17620 0.11 -0.8 3,883,308 - AO353_17620 0.11 -0.1 3,883,308 - AO353_17620 0.11 +1.1 3,883,308 - AO353_17620 0.11 -0.0 3,883,308 - AO353_17620 0.11 -0.4 3,883,308 - AO353_17620 0.11 +0.2 3,883,308 - AO353_17620 0.11 -0.8 3,883,308 - AO353_17620 0.11 +1.1 3,883,308 - AO353_17620 0.11 +0.5 3,883,308 - AO353_17620 0.11 -0.9 3,883,308 - AO353_17620 0.11 -0.1 3,883,308 - AO353_17620 0.11 -0.9 3,883,368 + AO353_17620 0.15 -0.3 3,883,369 - AO353_17620 0.15 -1.0 3,883,369 - AO353_17620 0.15 +0.1 3,883,391 + AO353_17620 0.17 -0.5 3,883,391 + AO353_17620 0.17 +1.5 3,883,391 + AO353_17620 0.17 +1.1 3,883,391 + AO353_17620 0.17 -0.5 3,883,391 + AO353_17620 0.17 +0.5 3,883,391 + AO353_17620 0.17 +3.3 3,883,391 + AO353_17620 0.17 +0.5 3,883,392 - AO353_17620 0.17 -0.1 3,883,392 - AO353_17620 0.17 +0.2 3,883,392 - AO353_17620 0.17 +1.1 3,883,392 - AO353_17620 0.17 -0.5 3,883,547 + AO353_17620 0.26 -0.1 3,883,547 + AO353_17620 0.26 -0.4 3,883,548 - AO353_17620 0.26 +1.3 3,883,548 - AO353_17620 0.26 +0.1 3,883,628 + AO353_17620 0.31 +0.3 3,883,628 + AO353_17620 0.31 +0.5 3,883,629 - AO353_17620 0.31 -0.1 3,883,647 + AO353_17620 0.32 +1.7 3,883,647 + AO353_17620 0.32 +0.2 3,883,683 + AO353_17620 0.35 -0.9 3,883,683 + AO353_17620 0.35 +1.5 3,883,683 + AO353_17620 0.35 -0.9 3,883,683 + AO353_17620 0.35 +1.2 3,883,683 + AO353_17620 0.35 -0.8 3,883,683 + AO353_17620 0.35 +2.1 3,883,683 + AO353_17620 0.35 -1.1 3,883,683 + AO353_17620 0.35 +3.1 3,883,683 + AO353_17620 0.35 +0.1 3,883,683 + AO353_17620 0.35 -0.5 3,883,683 + AO353_17620 0.35 +0.1 3,883,683 + AO353_17620 0.35 -0.7 3,883,683 + AO353_17620 0.35 +1.5 3,883,683 + AO353_17620 0.35 +2.8 3,883,683 + AO353_17620 0.35 -1.8 3,883,683 + AO353_17620 0.35 +2.1 3,883,683 + AO353_17620 0.35 +0.7 3,883,684 - AO353_17620 0.35 +0.1 3,883,684 - AO353_17620 0.35 +0.5 3,883,684 - AO353_17620 0.35 -0.8 3,883,684 - AO353_17620 0.35 -0.6 3,883,684 - AO353_17620 0.35 +0.1 3,883,684 - AO353_17620 0.35 -1.3 3,883,684 - AO353_17620 0.35 +0.4 3,883,684 - AO353_17620 0.35 +0.9 3,883,684 - AO353_17620 0.35 +0.5 3,883,684 - AO353_17620 0.35 +0.4 3,883,684 - AO353_17620 0.35 -0.9 3,883,684 - AO353_17620 0.35 +0.3 3,883,684 - AO353_17620 0.35 -0.5 3,883,684 - AO353_17620 0.35 +0.5 3,883,684 - AO353_17620 0.35 +0.3 3,883,684 - AO353_17620 0.35 -1.2 3,883,684 - AO353_17620 0.35 +0.2 3,883,684 - AO353_17620 0.35 -0.8 3,883,685 + AO353_17620 0.35 +0.2 3,883,685 + AO353_17620 0.35 -1.6 3,883,685 + AO353_17620 0.35 -0.5 3,883,686 - AO353_17620 0.35 +0.6 3,883,686 - AO353_17620 0.35 -1.1 3,883,686 - AO353_17620 0.35 +0.6 3,883,686 - AO353_17620 0.35 -0.5 3,883,686 - AO353_17620 0.35 +0.7 3,883,686 - AO353_17620 0.35 -0.4 3,883,754 + AO353_17620 0.39 -0.3 3,883,754 + AO353_17620 0.39 +0.8 3,883,755 - AO353_17620 0.39 +0.2 3,883,755 - AO353_17620 0.39 +0.5 3,883,755 - AO353_17620 0.39 +0.5 3,883,755 - AO353_17620 0.39 +0.5 3,883,755 - AO353_17620 0.39 -0.9 3,883,755 - AO353_17620 0.39 +0.1 3,883,755 - AO353_17620 0.39 +0.1 3,883,811 + AO353_17620 0.43 +0.5 3,883,811 + AO353_17620 0.43 -0.5 3,883,812 - AO353_17620 0.43 +0.6 3,883,812 - AO353_17620 0.43 -1.9 3,883,995 - AO353_17620 0.54 -0.2 3,884,102 + AO353_17620 0.61 +0.2 3,884,102 + AO353_17620 0.61 -0.8 3,884,102 + AO353_17620 0.61 -1.5 3,884,102 + AO353_17620 0.61 +0.2 3,884,102 + AO353_17620 0.61 +0.1 3,884,103 - AO353_17620 0.61 +1.3 3,884,103 - AO353_17620 0.61 -1.1 3,884,103 - AO353_17620 0.61 -1.5 3,884,103 - AO353_17620 0.61 -1.1 3,884,103 - AO353_17620 0.61 -0.3 3,884,103 - AO353_17620 0.61 -0.6 3,884,108 + AO353_17620 0.61 -1.1 3,884,108 + AO353_17620 0.61 +0.5 3,884,108 + AO353_17620 0.61 +0.3 3,884,108 + AO353_17620 0.61 +1.1 3,884,108 + AO353_17620 0.61 -0.2 3,884,108 + AO353_17620 0.61 -0.9 3,884,108 + AO353_17620 0.61 -0.5 3,884,108 + AO353_17620 0.61 +0.4 3,884,108 + AO353_17620 0.61 +0.5 3,884,109 - AO353_17620 0.61 -0.4 3,884,109 - AO353_17620 0.61 -0.8 3,884,109 - AO353_17620 0.61 -0.0 3,884,109 - AO353_17620 0.61 -0.2 3,884,109 - AO353_17620 0.61 +2.1 3,884,109 - AO353_17620 0.61 +0.1
Or see this region's nucleotide sequence