Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16285

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
3,615,096	+				-0.6
3,615,096	+				-2.6
3,615,097	-				-0.1
3,615,113	-				-1.3
3,615,135	-				-1.4
3,615,143	+				+1.6
3,615,143	+				-2.1
3,615,144	-				-0.1
3,615,204	+				-2.7
3,615,204	+				-1.7
3,615,204	+				-2.2
3,615,205	-				-1.9
3,615,205	-				-2.4
3,615,205	-				-2.3
3,615,205	-				-0.1
3,615,205	-				-2.5
3,615,268	+		AO353_16280	0.19	-0.6
3,615,300	+		AO353_16280	0.24	-0.1
3,615,300	+		AO353_16280	0.24	-1.5
3,615,300	+		AO353_16280	0.24	-1.7
3,615,301	-		AO353_16280	0.24	+0.5
3,615,313	+		AO353_16280	0.26	+0.4
3,615,314	-		AO353_16280	0.26	-0.6
3,615,314	-		AO353_16280	0.26	-2.4
3,615,314	-		AO353_16280	0.26	-1.5
3,615,314	-		AO353_16280	0.26	-1.6
3,615,314	-		AO353_16280	0.26	-0.6
3,615,486	+		AO353_16280	0.51	-1.0
3,615,588	+		AO353_16280	0.67	-1.4
3,615,588	+		AO353_16280	0.67	-2.2
3,615,588	+		AO353_16280	0.67	-0.1
3,615,588	+		AO353_16280	0.67	-0.5
3,615,589	-		AO353_16280	0.67	-0.6
3,615,589	-		AO353_16280	0.67	-1.1
3,615,630	+		AO353_16280	0.73	-1.1
3,615,630	+		AO353_16280	0.73	-2.2
3,615,630	+		AO353_16280	0.73	-0.4
3,615,630	+		AO353_16280	0.73	-0.7
3,615,631	-		AO353_16280	0.73	-1.0
3,615,631	-		AO353_16280	0.73	+1.2
3,615,631	-		AO353_16280	0.73	-2.2
3,615,631	-		AO353_16280	0.73	-1.5
3,615,639	+		AO353_16280	0.74	-1.3
3,615,639	+		AO353_16280	0.74	-0.8
3,615,640	-		AO353_16280	0.74	-1.1
3,615,640	-		AO353_16280	0.74	-3.0
3,615,640	-		AO353_16280	0.74	-0.6
3,615,640	-		AO353_16280	0.74	-1.0
3,615,640	-		AO353_16280	0.74	-0.8
3,615,640	-		AO353_16280	0.74	-1.7
3,615,640	-		AO353_16280	0.74	-1.4
3,615,785	+				-2.3
3,615,786	-				-0.6
3,615,812	+				+2.2
3,615,812	+				-2.1
3,615,812	+				-1.3
3,615,812	+				-1.8
3,615,813	-				-0.8
3,615,813	-				-1.3
3,615,813	-				-2.0
3,615,813	-				-1.9
3,615,813	-				+0.2
3,615,813	-				-0.6
3,615,816	+				-2.1
3,615,816	+				+0.2
3,615,817	-				-2.4
3,615,817	-				+1.2
3,615,817	-				-2.0
3,615,864	+				-0.6
3,615,864	+				-2.6
3,615,864	+				-3.2
3,615,864	+				-1.1
3,615,865	-				-2.0
3,615,865	-				-2.1
3,615,865	-				-1.5
3,615,865	-				-1.3
3,615,865	-				-1.7
3,615,865	-				+1.2
3,615,902	+		AO353_16285	0.12	+0.0
3,615,902	+		AO353_16285	0.12	-1.6
3,615,902	+		AO353_16285	0.12	-2.1
3,615,902	+		AO353_16285	0.12	-2.0
3,615,902	+		AO353_16285	0.12	-1.0
3,615,902	+		AO353_16285	0.12	-0.6
3,615,903	-		AO353_16285	0.12	-3.3
3,615,903	-		AO353_16285	0.12	-0.4
3,615,903	-		AO353_16285	0.12	-2.7
3,615,903	-		AO353_16285	0.12	-0.3
3,615,903	-		AO353_16285	0.12	-1.1
3,615,903	-		AO353_16285	0.12	-2.0
3,616,041	+		AO353_16285	0.31	-2.4
3,616,042	-		AO353_16285	0.31	+0.0
3,616,092	-		AO353_16285	0.38	-0.9
3,616,226	+		AO353_16285	0.56	+0.3
3,616,259	+		AO353_16285	0.60	-2.5
3,616,259	+		AO353_16285	0.60	-2.0
3,616,259	+		AO353_16285	0.60	-0.8
3,616,304	+		AO353_16285	0.66	-1.1
3,616,304	+		AO353_16285	0.66	-1.6
3,616,304	+		AO353_16285	0.66	-1.4
3,616,305	-		AO353_16285	0.66	-0.6
3,616,333	+		AO353_16285	0.70	-1.3
3,616,333	+		AO353_16285	0.70	-0.3
3,616,333	+		AO353_16285	0.70	+0.2
3,616,334	-		AO353_16285	0.70	-0.1
3,616,355	+		AO353_16285	0.73	-0.5
3,616,355	+		AO353_16285	0.73	-0.8
3,616,355	+		AO353_16285	0.73	-0.6
3,616,355	+		AO353_16285	0.73	-0.1
3,616,355	+		AO353_16285	0.73	-0.4
3,616,355	+		AO353_16285	0.73	-0.1
3,616,355	+		AO353_16285	0.73	-0.8
3,616,355	+		AO353_16285	0.73	-2.3
3,616,355	+		AO353_16285	0.73	-1.0
3,616,355	+		AO353_16285	0.73	-1.8
3,616,355	+		AO353_16285	0.73	-2.3
3,616,355	+		AO353_16285	0.73	-2.8
3,616,356	-		AO353_16285	0.73	-1.7
3,616,356	-		AO353_16285	0.73	-1.5
3,616,356	-		AO353_16285	0.73	+0.9
3,616,356	-		AO353_16285	0.73	-0.1
3,616,356	-		AO353_16285	0.73	-2.3
3,616,356	-		AO353_16285	0.73	+0.8
3,616,356	-		AO353_16285	0.73	+0.9
3,616,356	-		AO353_16285	0.73	-0.4
3,616,356	-		AO353_16285	0.73	+0.6
3,616,496	+				+0.2
3,616,496	+				-2.3
3,616,496	+				-1.7
3,616,496	+				+1.2
3,616,496	+				-0.8
3,616,496	+				-0.8
3,616,496	+				-0.6
3,616,497	-				-1.3
3,616,497	-				-0.7
3,616,497	-				-0.1
3,616,497	-				-0.1
3,616,497	-				-0.6
3,616,497	-				-0.6
3,616,497	-				-1.7
3,616,550	+				-2.0
3,616,550	+				-2.3
3,616,550	+				+0.6
3,616,551	-				-1.6
3,616,551	-				+0.4
3,616,551	-				-1.1
3,616,551	-				+1.2
3,616,551	-				-0.4
3,616,551	-				+1.2
3,616,551	-				-1.4
3,616,551	-				-2.8
3,616,585	+				+0.8
3,616,585	+				-0.8
3,616,585	+				-0.3
3,616,585	+				-0.9
3,616,585	+				-1.3
3,616,585	+				-3.1
3,616,585	+				+0.6
3,616,585	+				-1.1
3,616,585	+				-1.4
3,616,585	+				+0.6
3,616,585	+				-0.5
3,616,586	-				-0.6
3,616,586	-				-0.6
3,616,586	-				-1.3
3,616,586	-				+0.4
3,616,586	-				-2.1
3,616,586	-				+0.7
3,616,586	-				-0.3
3,616,586	-				+1.8
3,616,586	-				-1.1
3,616,586	-				+0.4
3,616,693	+				-2.4
3,616,873	+		AO353_16290	0.14	-3.6
3,616,873	+		AO353_16290	0.14	+0.6
3,616,873	+		AO353_16290	0.14	-1.8
3,616,874	-		AO353_16290	0.14	-2.3
3,616,874	-		AO353_16290	0.14	-1.9
3,616,877	+		AO353_16290	0.14	-1.0
3,616,877	+		AO353_16290	0.14	-1.9
3,616,877	+		AO353_16290	0.14	-0.8
3,616,877	+		AO353_16290	0.14	-2.7
3,616,877	+		AO353_16290	0.14	-3.0
3,616,877	+		AO353_16290	0.14	-2.3
3,616,877	+		AO353_16290	0.14	-0.8
3,616,877	+		AO353_16290	0.14	+0.6
3,616,877	+		AO353_16290	0.14	-1.9
3,616,877	+		AO353_16290	0.14	-1.7
3,616,878	-		AO353_16290	0.14	-0.8
3,616,878	-		AO353_16290	0.14	-1.9
3,616,878	-		AO353_16290	0.14	-2.3
3,616,878	-		AO353_16290	0.14	-1.6
3,616,878	-		AO353_16290	0.14	-1.1
3,616,878	-		AO353_16290	0.14	+0.2
3,616,900	+		AO353_16290	0.17	-0.8
3,616,900	+		AO353_16290	0.17	-3.3
3,616,900	+		AO353_16290	0.17	-2.9
3,616,900	+		AO353_16290	0.17	+0.2
3,616,901	-		AO353_16290	0.17	-1.6
3,616,901	-		AO353_16290	0.17	-0.4
3,616,901	-		AO353_16290	0.17	-2.4
3,616,901	-		AO353_16290	0.17	-1.8
3,616,901	-		AO353_16290	0.17	-1.0
3,616,901	-		AO353_16290	0.17	-2.3
3,616,901	-		AO353_16290	0.17	-1.3
3,616,923	+		AO353_16290	0.19	-0.4
3,616,924	-		AO353_16290	0.19	-1.6
3,616,978	+		AO353_16290	0.25	-1.0
3,616,978	+		AO353_16290	0.25	-2.1
3,616,978	+		AO353_16290	0.25	-1.0
3,616,978	+		AO353_16290	0.25	-1.6
3,616,978	+		AO353_16290	0.25	-1.4
3,616,979	-		AO353_16290	0.25	+0.8
3,617,236	+		AO353_16290	0.53	-0.6
3,617,236	+		AO353_16290	0.53	-1.9
3,617,236	+		AO353_16290	0.53	-1.4
3,617,236	+		AO353_16290	0.53	-1.1
3,617,236	+		AO353_16290	0.53	+0.6
3,617,237	-		AO353_16290	0.53	+0.4
3,617,237	-		AO353_16290	0.53	-1.7
3,617,237	-		AO353_16290	0.53	-0.5
3,617,349	+		AO353_16290	0.66	+0.2
3,617,349	+		AO353_16290	0.66	-1.5
3,617,349	+		AO353_16290	0.66	-2.3
3,617,349	+		AO353_16290	0.66	-1.5
3,617,350	-		AO353_16290	0.66	-2.8
3,617,350	-		AO353_16290	0.66	-0.6
3,617,350	-		AO353_16290	0.66	-1.5
3,617,350	-		AO353_16290	0.66	+0.2
3,617,350	-		AO353_16290	0.66	-1.1
3,617,376	-		AO353_16290	0.69	-1.3
3,617,401	+		AO353_16290	0.71	-0.6
3,617,401	+		AO353_16290	0.71	-1.5
3,617,401	+		AO353_16290	0.71	-2.6
3,617,402	-		AO353_16290	0.71	-1.9
3,617,402	-		AO353_16290	0.71	-2.4
3,617,402	-		AO353_16290	0.71	-1.5
3,617,509	+		AO353_16290	0.83	-2.1
3,617,509	+		AO353_16290	0.83	-1.0
3,617,510	-		AO353_16290	0.83	-2.9
3,617,510	-		AO353_16290	0.83	+0.2
3,617,522	+		AO353_16290	0.84	-1.3
3,617,522	+		AO353_16290	0.84	-1.3
3,617,522	+		AO353_16290	0.84	+0.2
3,617,523	-		AO353_16290	0.85	-1.4
3,617,523	-		AO353_16290	0.85	-0.1
3,617,523	-		AO353_16290	0.85	-0.4