Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_15440 and AO353_15445 are separated by 300 nucleotides AO353_15445 and AO353_15450 are separated by 815 nucleotides
AO353_15440: AO353_15440 - dihydropteridine reductase, at 3,412,656 to 3,413,837
_15440
AO353_15445: AO353_15445 - disulfide bond formation protein B, at 3,414,138 to 3,414,647
_15445
AO353_15450: AO353_15450 - ubiquinol oxidase subunit II, at 3,415,463 to 3,416,413
_15450
Position (kb)
3414
3415 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3413.175 kb on + strand, within AO353_15440 at 3413.175 kb on + strand, within AO353_15440 at 3413.176 kb on - strand, within AO353_15440 at 3413.176 kb on - strand, within AO353_15440 at 3413.176 kb on - strand, within AO353_15440 at 3413.226 kb on + strand, within AO353_15440 at 3413.226 kb on + strand, within AO353_15440 at 3413.226 kb on + strand, within AO353_15440 at 3413.226 kb on + strand, within AO353_15440 at 3413.226 kb on + strand, within AO353_15440 at 3413.226 kb on + strand, within AO353_15440 at 3413.226 kb on + strand, within AO353_15440 at 3413.274 kb on + strand, within AO353_15440 at 3413.274 kb on + strand, within AO353_15440 at 3413.274 kb on + strand, within AO353_15440 at 3413.274 kb on + strand, within AO353_15440 at 3413.274 kb on + strand, within AO353_15440 at 3413.275 kb on - strand, within AO353_15440 at 3413.352 kb on + strand, within AO353_15440 at 3413.352 kb on + strand, within AO353_15440 at 3413.352 kb on + strand, within AO353_15440 at 3413.353 kb on - strand, within AO353_15440 at 3413.353 kb on - strand, within AO353_15440 at 3413.353 kb on - strand, within AO353_15440 at 3413.526 kb on - strand, within AO353_15440 at 3413.613 kb on + strand, within AO353_15440 at 3413.613 kb on + strand, within AO353_15440 at 3413.613 kb on + strand, within AO353_15440 at 3413.613 kb on + strand, within AO353_15440 at 3413.613 kb on + strand, within AO353_15440 at 3413.613 kb on + strand, within AO353_15440 at 3413.614 kb on - strand, within AO353_15440 at 3413.614 kb on - strand, within AO353_15440 at 3413.614 kb on - strand, within AO353_15440 at 3413.614 kb on - strand, within AO353_15440 at 3413.614 kb on - strand, within AO353_15440 at 3413.614 kb on - strand, within AO353_15440 at 3413.614 kb on - strand, within AO353_15440 at 3413.614 kb on - strand, within AO353_15440 at 3413.721 kb on + strand at 3413.721 kb on + strand at 3413.721 kb on + strand at 3413.721 kb on + strand at 3413.722 kb on - strand at 3413.722 kb on - strand at 3413.722 kb on - strand at 3413.722 kb on - strand at 3413.722 kb on - strand at 3413.722 kb on - strand at 3413.722 kb on - strand at 3413.835 kb on + strand at 3413.835 kb on + strand at 3413.835 kb on + strand at 3413.835 kb on + strand at 3413.835 kb on + strand at 3413.836 kb on - strand at 3413.836 kb on - strand at 3413.836 kb on - strand at 3413.836 kb on - strand at 3413.841 kb on + strand at 3413.842 kb on - strand at 3413.842 kb on - strand at 3413.842 kb on - strand at 3413.890 kb on + strand at 3413.891 kb on - strand at 3413.909 kb on + strand at 3413.909 kb on + strand at 3413.909 kb on + strand at 3413.909 kb on + strand at 3413.909 kb on + strand at 3413.909 kb on + strand at 3413.910 kb on - strand at 3413.915 kb on + strand at 3413.915 kb on + strand at 3413.915 kb on + strand at 3413.915 kb on + strand at 3413.915 kb on + strand at 3413.929 kb on + strand at 3413.929 kb on + strand at 3413.930 kb on - strand at 3413.930 kb on - strand at 3413.985 kb on + strand at 3413.986 kb on - strand at 3413.996 kb on + strand at 3413.996 kb on + strand at 3413.996 kb on + strand at 3413.997 kb on - strand at 3413.997 kb on - strand at 3413.997 kb on - strand at 3413.999 kb on + strand at 3413.999 kb on + strand at 3413.999 kb on + strand at 3413.999 kb on + strand at 3413.999 kb on + strand at 3413.999 kb on + strand at 3414.000 kb on - strand at 3414.000 kb on - strand at 3414.000 kb on - strand at 3414.000 kb on - strand at 3414.000 kb on - strand at 3414.049 kb on + strand at 3414.049 kb on + strand at 3414.068 kb on + strand at 3414.068 kb on + strand at 3414.068 kb on + strand at 3414.068 kb on + strand at 3414.068 kb on + strand at 3414.068 kb on + strand at 3414.068 kb on + strand at 3414.068 kb on + strand at 3414.069 kb on - strand at 3414.069 kb on - strand at 3414.069 kb on - strand at 3414.069 kb on - strand at 3414.069 kb on - strand at 3414.069 kb on - strand at 3414.069 kb on - strand at 3414.069 kb on - strand at 3414.069 kb on - strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.072 kb on + strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.073 kb on - strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.074 kb on + strand at 3414.075 kb on - strand at 3414.075 kb on - strand at 3414.075 kb on - strand at 3414.075 kb on - strand at 3414.075 kb on - strand at 3414.075 kb on - strand at 3414.075 kb on - strand at 3414.075 kb on - strand at 3414.106 kb on + strand at 3414.106 kb on + strand at 3414.106 kb on + strand at 3414.106 kb on + strand at 3414.106 kb on + strand at 3414.107 kb on - strand at 3414.107 kb on - strand at 3414.107 kb on - strand at 3414.107 kb on - strand at 3414.107 kb on - strand at 3414.228 kb on + strand, within AO353_15445 at 3414.228 kb on + strand, within AO353_15445 at 3414.228 kb on + strand at 3414.229 kb on - strand, within AO353_15445 at 3414.229 kb on - strand, within AO353_15445 at 3414.282 kb on + strand, within AO353_15445 at 3414.283 kb on - strand, within AO353_15445 at 3414.414 kb on + strand, within AO353_15445 at 3414.414 kb on + strand, within AO353_15445 at 3414.415 kb on - strand, within AO353_15445 at 3414.417 kb on - strand, within AO353_15445 at 3414.678 kb on - strand at 3414.851 kb on + strand at 3414.852 kb on - strand at 3414.852 kb on - strand at 3414.852 kb on - strand at 3414.906 kb on + strand at 3414.928 kb on - strand at 3415.128 kb on + strand at 3415.130 kb on + strand at 3415.130 kb on + strand at 3415.130 kb on + strand at 3415.130 kb on + strand at 3415.130 kb on + strand at 3415.131 kb on - strand at 3415.131 kb on - strand at 3415.131 kb on - strand at 3415.131 kb on - strand at 3415.131 kb on - strand at 3415.131 kb on - strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.138 kb on + strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.139 kb on - strand at 3415.142 kb on + strand at 3415.142 kb on + strand at 3415.142 kb on + strand at 3415.142 kb on + strand at 3415.142 kb on + strand at 3415.142 kb on + strand at 3415.142 kb on + strand at 3415.142 kb on + strand at 3415.143 kb on - strand at 3415.143 kb on - strand at 3415.143 kb on - strand at 3415.143 kb on - strand at 3415.143 kb on - strand at 3415.143 kb on - strand at 3415.143 kb on - strand at 3415.146 kb on + strand at 3415.146 kb on + strand at 3415.146 kb on + strand at 3415.146 kb on + strand at 3415.146 kb on + strand at 3415.146 kb on + strand at 3415.146 kb on + strand at 3415.146 kb on + strand at 3415.147 kb on - strand at 3415.147 kb on - strand at 3415.147 kb on - strand at 3415.147 kb on - strand at 3415.279 kb on + strand at 3415.279 kb on + strand at 3415.280 kb on - strand at 3415.280 kb on - strand at 3415.280 kb on - strand at 3415.280 kb on - strand at 3415.280 kb on - strand at 3415.280 kb on - strand at 3415.307 kb on + strand at 3415.307 kb on + strand at 3415.307 kb on + strand at 3415.308 kb on - strand at 3415.370 kb on - strand at 3415.451 kb on - strand at 3415.451 kb on - strand at 3415.468 kb on + strand at 3415.469 kb on - strand at 3415.469 kb on - strand at 3415.479 kb on - strand at 3415.488 kb on + strand at 3415.489 kb on - strand at 3415.489 kb on - strand at 3415.489 kb on - strand at 3415.489 kb on - strand at 3415.491 kb on + strand at 3415.491 kb on + strand at 3415.491 kb on + strand at 3415.491 kb on + strand at 3415.491 kb on + strand at 3415.491 kb on + strand at 3415.491 kb on + strand at 3415.491 kb on + strand at 3415.491 kb on + strand at 3415.491 kb on + strand at 3415.492 kb on - strand at 3415.492 kb on - strand at 3415.492 kb on - strand at 3415.492 kb on - strand at 3415.492 kb on - strand at 3415.497 kb on + strand at 3415.498 kb on - strand at 3415.498 kb on - strand at 3415.498 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 3,413,175 + AO353_15440 0.44 -0.3 3,413,175 + AO353_15440 0.44 +0.4 3,413,176 - AO353_15440 0.44 -1.2 3,413,176 - AO353_15440 0.44 +0.0 3,413,176 - AO353_15440 0.44 -0.8 3,413,226 + AO353_15440 0.48 -0.1 3,413,226 + AO353_15440 0.48 +0.4 3,413,226 + AO353_15440 0.48 -1.1 3,413,226 + AO353_15440 0.48 -0.1 3,413,226 + AO353_15440 0.48 +0.1 3,413,226 + AO353_15440 0.48 -1.5 3,413,226 + AO353_15440 0.48 -0.3 3,413,274 + AO353_15440 0.52 -1.8 3,413,274 + AO353_15440 0.52 +0.4 3,413,274 + AO353_15440 0.52 +0.7 3,413,274 + AO353_15440 0.52 -0.6 3,413,274 + AO353_15440 0.52 -1.2 3,413,275 - AO353_15440 0.52 -0.3 3,413,352 + AO353_15440 0.59 +0.8 3,413,352 + AO353_15440 0.59 -0.1 3,413,352 + AO353_15440 0.59 -0.3 3,413,353 - AO353_15440 0.59 -0.8 3,413,353 - AO353_15440 0.59 +0.2 3,413,353 - AO353_15440 0.59 -0.1 3,413,526 - AO353_15440 0.74 -1.7 3,413,613 + AO353_15440 0.81 -1.1 3,413,613 + AO353_15440 0.81 -1.2 3,413,613 + AO353_15440 0.81 +1.2 3,413,613 + AO353_15440 0.81 -1.6 3,413,613 + AO353_15440 0.81 +0.5 3,413,613 + AO353_15440 0.81 -0.8 3,413,614 - AO353_15440 0.81 -0.6 3,413,614 - AO353_15440 0.81 -0.1 3,413,614 - AO353_15440 0.81 -1.2 3,413,614 - AO353_15440 0.81 -0.8 3,413,614 - AO353_15440 0.81 -0.8 3,413,614 - AO353_15440 0.81 -0.5 3,413,614 - AO353_15440 0.81 +0.0 3,413,614 - AO353_15440 0.81 +0.4 3,413,721 + +0.6 3,413,721 + -2.7 3,413,721 + +1.2 3,413,721 + -1.2 3,413,722 - +0.9 3,413,722 - -0.6 3,413,722 - -0.5 3,413,722 - +0.9 3,413,722 - -1.3 3,413,722 - -0.3 3,413,722 - +1.2 3,413,835 + -0.2 3,413,835 + +0.9 3,413,835 + +0.2 3,413,835 + +1.5 3,413,835 + +0.8 3,413,836 - -0.1 3,413,836 - -0.6 3,413,836 - -0.5 3,413,836 - -2.0 3,413,841 + +1.5 3,413,842 - -1.9 3,413,842 - +0.2 3,413,842 - -0.6 3,413,890 + -1.5 3,413,891 - -0.5 3,413,909 + -0.9 3,413,909 + +0.2 3,413,909 + -0.3 3,413,909 + -0.8 3,413,909 + -0.9 3,413,909 + +2.2 3,413,910 - -2.3 3,413,915 + -1.2 3,413,915 + -0.5 3,413,915 + +0.4 3,413,915 + +0.8 3,413,915 + -2.5 3,413,929 + -0.1 3,413,929 + -0.8 3,413,930 - -0.4 3,413,930 - -0.6 3,413,985 + -1.0 3,413,986 - +0.5 3,413,996 + -0.7 3,413,996 + +0.2 3,413,996 + -0.5 3,413,997 - +0.8 3,413,997 - -0.7 3,413,997 - -1.7 3,413,999 + +1.0 3,413,999 + -0.5 3,413,999 + +0.2 3,413,999 + +1.8 3,413,999 + +1.8 3,413,999 + -1.2 3,414,000 - +1.4 3,414,000 - +0.1 3,414,000 - +1.2 3,414,000 - -0.6 3,414,000 - -0.5 3,414,049 + +1.2 3,414,049 + +0.0 3,414,068 + -1.8 3,414,068 + -0.8 3,414,068 + +1.7 3,414,068 + -0.5 3,414,068 + -0.6 3,414,068 + -0.8 3,414,068 + -1.7 3,414,068 + -0.1 3,414,069 - -0.3 3,414,069 - +2.6 3,414,069 - -0.3 3,414,069 - -0.1 3,414,069 - -0.7 3,414,069 - +0.2 3,414,069 - -0.5 3,414,069 - -0.3 3,414,069 - -1.8 3,414,072 + +0.2 3,414,072 + -0.3 3,414,072 + +0.3 3,414,072 + +1.7 3,414,072 + -0.3 3,414,072 + +0.7 3,414,072 + +1.1 3,414,072 + -1.4 3,414,072 + +0.4 3,414,072 + +0.0 3,414,072 + +0.7 3,414,072 + +0.9 3,414,072 + -2.1 3,414,072 + +1.0 3,414,072 + -0.5 3,414,072 + +0.1 3,414,072 + -2.0 3,414,072 + +0.2 3,414,072 + -0.1 3,414,072 + -0.5 3,414,072 + +0.7 3,414,072 + -0.5 3,414,072 + -0.2 3,414,072 + -0.6 3,414,073 - -0.4 3,414,073 - +0.3 3,414,073 - +1.7 3,414,073 - -0.1 3,414,073 - +0.1 3,414,073 - -1.2 3,414,073 - -1.8 3,414,073 - +2.6 3,414,073 - -0.2 3,414,073 - -0.9 3,414,073 - +0.4 3,414,073 - -0.3 3,414,073 - -1.1 3,414,073 - +1.6 3,414,073 - +0.2 3,414,073 - -0.2 3,414,073 - +0.3 3,414,073 - -0.1 3,414,073 - -0.4 3,414,073 - -1.8 3,414,073 - -0.8 3,414,073 - +0.9 3,414,073 - +0.7 3,414,073 - +0.4 3,414,074 + -1.2 3,414,074 + -1.2 3,414,074 + +0.7 3,414,074 + -0.3 3,414,074 + +0.1 3,414,074 + +1.1 3,414,074 + +1.0 3,414,074 + -1.2 3,414,074 + +0.2 3,414,074 + -0.1 3,414,074 + +0.5 3,414,075 - +2.2 3,414,075 - +1.7 3,414,075 - -1.2 3,414,075 - -1.2 3,414,075 - -0.5 3,414,075 - +1.0 3,414,075 - -1.6 3,414,075 - +1.0 3,414,106 + +0.7 3,414,106 + -1.3 3,414,106 + -0.7 3,414,106 + +0.7 3,414,106 + -0.8 3,414,107 - -0.1 3,414,107 - +0.1 3,414,107 - -0.8 3,414,107 - -0.3 3,414,107 - -0.0 3,414,228 + AO353_15445 0.18 -0.8 3,414,228 + AO353_15445 0.18 -0.2 3,414,228 + +0.2 3,414,229 - AO353_15445 0.18 -0.8 3,414,229 - AO353_15445 0.18 -0.9 3,414,282 + AO353_15445 0.28 -0.3 3,414,283 - AO353_15445 0.28 -1.1 3,414,414 + AO353_15445 0.54 +1.2 3,414,414 + AO353_15445 0.54 -0.1 3,414,415 - AO353_15445 0.54 +0.2 3,414,417 - AO353_15445 0.55 -0.6 3,414,678 - +0.1 3,414,851 + -2.1 3,414,852 - -0.0 3,414,852 - +1.7 3,414,852 - -1.9 3,414,906 + +0.5 3,414,928 - +0.2 3,415,128 + -1.1 3,415,130 + +2.2 3,415,130 + -0.6 3,415,130 + +1.7 3,415,130 + -0.1 3,415,130 + -0.9 3,415,131 - -1.2 3,415,131 - -1.5 3,415,131 - -0.4 3,415,131 - -0.7 3,415,131 - +0.8 3,415,131 - -0.9 3,415,138 + -0.3 3,415,138 + -0.7 3,415,138 + -1.2 3,415,138 + +0.1 3,415,138 + +0.7 3,415,138 + -0.1 3,415,138 + -0.6 3,415,138 + +0.7 3,415,138 + -0.1 3,415,138 + -0.6 3,415,138 + +1.2 3,415,138 + -0.0 3,415,138 + -0.4 3,415,138 + -0.3 3,415,138 + -0.1 3,415,138 + +1.4 3,415,138 + +1.1 3,415,138 + -2.8 3,415,139 - +1.1 3,415,139 - +1.7 3,415,139 - -0.1 3,415,139 - -0.1 3,415,139 - -1.3 3,415,139 - +0.2 3,415,139 - -0.8 3,415,139 - +1.0 3,415,139 - -0.1 3,415,139 - +2.2 3,415,139 - +1.7 3,415,139 - -0.3 3,415,139 - +1.4 3,415,139 - -0.1 3,415,142 + +0.2 3,415,142 + +0.3 3,415,142 + -1.3 3,415,142 + -0.1 3,415,142 + +0.7 3,415,142 + -0.9 3,415,142 + -1.1 3,415,142 + +0.2 3,415,143 - -0.3 3,415,143 - -0.1 3,415,143 - +1.1 3,415,143 - -0.6 3,415,143 - -0.6 3,415,143 - +0.9 3,415,143 - +0.4 3,415,146 + +0.7 3,415,146 + -0.7 3,415,146 + -0.3 3,415,146 + -0.2 3,415,146 + +1.8 3,415,146 + +1.0 3,415,146 + +1.1 3,415,146 + -0.8 3,415,147 - -0.5 3,415,147 - +0.9 3,415,147 - +1.2 3,415,147 - -0.9 3,415,279 + -0.7 3,415,279 + +0.8 3,415,280 - -2.0 3,415,280 - +1.2 3,415,280 - +1.1 3,415,280 - -0.3 3,415,280 - -0.1 3,415,280 - -0.1 3,415,307 + -1.5 3,415,307 + +1.0 3,415,307 + -1.0 3,415,308 - -0.1 3,415,370 - +0.6 3,415,451 - +0.4 3,415,451 - -0.1 3,415,468 + +0.8 3,415,469 - +0.9 3,415,469 - -0.2 3,415,479 - +1.8 3,415,488 + -0.3 3,415,489 - +0.1 3,415,489 - -0.1 3,415,489 - -0.1 3,415,489 - -1.9 3,415,491 + -1.0 3,415,491 + -0.1 3,415,491 + +2.2 3,415,491 + +0.1 3,415,491 + -0.6 3,415,491 + +0.2 3,415,491 + +1.2 3,415,491 + +2.2 3,415,491 + +0.2 3,415,491 + -0.6 3,415,492 - +1.7 3,415,492 - +2.2 3,415,492 - +0.2 3,415,492 - -1.5 3,415,492 - -0.1 3,415,497 + -0.3 3,415,498 - -0.5 3,415,498 - +0.4 3,415,498 - -0.5
Or see this region's nucleotide sequence