Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14955

Experiment: L-Aspartic Acid (C)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntAO353_14950 and AO353_14955 are separated by 554 nucleotidesAO353_14955 and AO353_14960 are separated by 179 nucleotidesAO353_14960 and AO353_14965 are separated by 60 nucleotides AO353_14950: AO353_14950 - hypothetical protein, at 3,305,685 to 3,306,269 _14950 AO353_14955: AO353_14955 - hypothetical protein, at 3,306,824 to 3,307,030 _14955 AO353_14960: AO353_14960 - hypothetical protein, at 3,307,210 to 3,307,500 _14960 AO353_14965: AO353_14965 - glycerol acyltransferase, at 3,307,561 to 3,308,727 _14965 Position (kb) 3306 3307 3308Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3305.985 kb on - strand, within AO353_14950at 3305.985 kb on - strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.991 kb on + strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3305.992 kb on - strand, within AO353_14950at 3306.033 kb on + strand, within AO353_14950at 3306.033 kb on + strand, within AO353_14950at 3306.033 kb on + strand, within AO353_14950at 3306.033 kb on + strand, within AO353_14950at 3306.033 kb on + strand, within AO353_14950at 3306.033 kb on + strand, within AO353_14950at 3306.034 kb on - strand, within AO353_14950at 3306.034 kb on - strand, within AO353_14950at 3306.034 kb on - strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.057 kb on + strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.058 kb on - strand, within AO353_14950at 3306.075 kb on - strand, within AO353_14950at 3306.075 kb on - strand, within AO353_14950at 3306.121 kb on - strand, within AO353_14950at 3306.121 kb on - strand, within AO353_14950at 3306.121 kb on - strand, within AO353_14950at 3306.355 kb on - strandat 3306.396 kb on + strandat 3306.402 kb on + strandat 3306.402 kb on + strandat 3306.412 kb on + strandat 3306.412 kb on + strandat 3306.412 kb on + strandat 3306.412 kb on + strandat 3306.412 kb on + strandat 3306.413 kb on - strandat 3306.413 kb on - strandat 3306.413 kb on - strandat 3306.413 kb on - strandat 3306.413 kb on - strandat 3306.599 kb on + strandat 3306.599 kb on + strandat 3306.599 kb on + strandat 3306.599 kb on + strandat 3306.825 kb on + strandat 3306.826 kb on - strandat 3306.826 kb on - strandat 3306.836 kb on + strandat 3306.836 kb on + strandat 3306.836 kb on + strandat 3306.836 kb on + strandat 3306.836 kb on + strandat 3306.836 kb on + strandat 3306.836 kb on + strandat 3306.837 kb on - strandat 3306.837 kb on - strandat 3306.837 kb on - strandat 3306.837 kb on - strandat 3306.837 kb on - strandat 3306.837 kb on - strandat 3306.840 kb on + strandat 3306.840 kb on + strandat 3306.840 kb on + strandat 3306.840 kb on + strandat 3306.840 kb on + strandat 3306.840 kb on + strandat 3306.840 kb on + strandat 3306.840 kb on + strandat 3306.841 kb on - strandat 3306.841 kb on - strandat 3306.841 kb on - strandat 3306.919 kb on - strand, within AO353_14955at 3306.999 kb on + strand, within AO353_14955at 3306.999 kb on + strand, within AO353_14955at 3306.999 kb on + strand, within AO353_14955at 3306.999 kb on + strand, within AO353_14955at 3306.999 kb on + strand, within AO353_14955at 3307.000 kb on - strand, within AO353_14955at 3307.000 kb on - strand, within AO353_14955at 3307.000 kb on - strand, within AO353_14955at 3307.074 kb on + strandat 3307.074 kb on + strandat 3307.075 kb on - strandat 3307.103 kb on + strandat 3307.104 kb on - strandat 3307.104 kb on - strandat 3307.104 kb on - strandat 3307.104 kb on - strandat 3307.111 kb on - strandat 3307.111 kb on - strandat 3307.111 kb on - strandat 3307.198 kb on + strandat 3307.199 kb on - strandat 3307.201 kb on - strandat 3307.224 kb on + strandat 3307.224 kb on + strandat 3307.224 kb on + strandat 3307.224 kb on + strandat 3307.224 kb on + strandat 3307.224 kb on + strandat 3307.224 kb on + strandat 3307.225 kb on - strandat 3307.225 kb on - strandat 3307.225 kb on - strandat 3307.225 kb on - strandat 3307.470 kb on - strand, within AO353_14960at 3307.547 kb on - strandat 3307.547 kb on - strandat 3307.562 kb on + strandat 3307.562 kb on + strandat 3307.562 kb on + strandat 3307.562 kb on + strandat 3307.563 kb on - strandat 3307.563 kb on - strandat 3307.563 kb on - strandat 3307.563 kb on - strandat 3307.563 kb on - strandat 3307.563 kb on - strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
remove
3,305,985 - AO353_14950 0.51 -0.5
3,305,985 - AO353_14950 0.51 -0.1
3,305,991 + AO353_14950 0.52 +0.1
3,305,991 + AO353_14950 0.52 -0.2
3,305,991 + AO353_14950 0.52 -0.3
3,305,991 + AO353_14950 0.52 -0.5
3,305,991 + AO353_14950 0.52 +3.3
3,305,991 + AO353_14950 0.52 -2.3
3,305,991 + AO353_14950 0.52 -1.9
3,305,991 + AO353_14950 0.52 +0.2
3,305,991 + AO353_14950 0.52 +0.2
3,305,991 + AO353_14950 0.52 +0.3
3,305,991 + AO353_14950 0.52 +0.5
3,305,991 + AO353_14950 0.52 -1.1
3,305,992 - AO353_14950 0.52 +0.7
3,305,992 - AO353_14950 0.52 +1.8
3,305,992 - AO353_14950 0.52 -0.1
3,305,992 - AO353_14950 0.52 -0.9
3,305,992 - AO353_14950 0.52 -0.5
3,305,992 - AO353_14950 0.52 -2.0
3,305,992 - AO353_14950 0.52 +1.4
3,305,992 - AO353_14950 0.52 +0.3
3,305,992 - AO353_14950 0.52 +1.8
3,305,992 - AO353_14950 0.52 -0.5
3,305,992 - AO353_14950 0.52 +0.5
3,305,992 - AO353_14950 0.52 +1.3
3,305,992 - AO353_14950 0.52 -0.7
3,305,992 - AO353_14950 0.52 -0.0
3,305,992 - AO353_14950 0.52 +0.3
3,305,992 - AO353_14950 0.52 -1.4
3,305,992 - AO353_14950 0.52 +1.1
3,305,992 - AO353_14950 0.52 +1.3
3,306,033 + AO353_14950 0.59 +1.7
3,306,033 + AO353_14950 0.59 -0.2
3,306,033 + AO353_14950 0.59 +0.3
3,306,033 + AO353_14950 0.59 -0.0
3,306,033 + AO353_14950 0.59 -0.9
3,306,033 + AO353_14950 0.59 +0.1
3,306,034 - AO353_14950 0.60 +0.3
3,306,034 - AO353_14950 0.60 -0.0
3,306,034 - AO353_14950 0.60 -1.3
3,306,057 + AO353_14950 0.64 -1.0
3,306,057 + AO353_14950 0.64 -0.1
3,306,057 + AO353_14950 0.64 -0.2
3,306,057 + AO353_14950 0.64 -0.4
3,306,057 + AO353_14950 0.64 -2.9
3,306,057 + AO353_14950 0.64 -0.6
3,306,057 + AO353_14950 0.64 +0.3
3,306,057 + AO353_14950 0.64 -0.4
3,306,057 + AO353_14950 0.64 +1.7
3,306,057 + AO353_14950 0.64 -0.7
3,306,057 + AO353_14950 0.64 -0.2
3,306,057 + AO353_14950 0.64 -1.0
3,306,057 + AO353_14950 0.64 +1.1
3,306,057 + AO353_14950 0.64 +0.4
3,306,057 + AO353_14950 0.64 +0.4
3,306,057 + AO353_14950 0.64 +0.4
3,306,057 + AO353_14950 0.64 +0.5
3,306,057 + AO353_14950 0.64 +0.7
3,306,057 + AO353_14950 0.64 +0.3
3,306,057 + AO353_14950 0.64 -1.2
3,306,057 + AO353_14950 0.64 -0.3
3,306,057 + AO353_14950 0.64 -0.8
3,306,057 + AO353_14950 0.64 -1.2
3,306,057 + AO353_14950 0.64 -0.3
3,306,057 + AO353_14950 0.64 +0.1
3,306,057 + AO353_14950 0.64 +1.0
3,306,057 + AO353_14950 0.64 +0.4
3,306,057 + AO353_14950 0.64 -0.6
3,306,057 + AO353_14950 0.64 -1.3
3,306,057 + AO353_14950 0.64 -0.0
3,306,057 + AO353_14950 0.64 +0.1
3,306,057 + AO353_14950 0.64 +0.1
3,306,057 + AO353_14950 0.64 +1.3
3,306,057 + AO353_14950 0.64 +1.3
3,306,057 + AO353_14950 0.64 +0.1
3,306,057 + AO353_14950 0.64 -1.0
3,306,057 + AO353_14950 0.64 -0.9
3,306,057 + AO353_14950 0.64 -1.0
3,306,057 + AO353_14950 0.64 +1.7
3,306,057 + AO353_14950 0.64 -1.0
3,306,057 + AO353_14950 0.64 +0.2
3,306,057 + AO353_14950 0.64 +2.0
3,306,058 - AO353_14950 0.64 -0.0
3,306,058 - AO353_14950 0.64 -0.9
3,306,058 - AO353_14950 0.64 +1.3
3,306,058 - AO353_14950 0.64 +0.6
3,306,058 - AO353_14950 0.64 -0.9
3,306,058 - AO353_14950 0.64 +0.8
3,306,058 - AO353_14950 0.64 -0.7
3,306,058 - AO353_14950 0.64 -0.0
3,306,058 - AO353_14950 0.64 -0.0
3,306,058 - AO353_14950 0.64 +0.3
3,306,058 - AO353_14950 0.64 -0.5
3,306,058 - AO353_14950 0.64 -0.7
3,306,058 - AO353_14950 0.64 -0.7
3,306,058 - AO353_14950 0.64 -0.7
3,306,058 - AO353_14950 0.64 +0.7
3,306,058 - AO353_14950 0.64 +0.1
3,306,058 - AO353_14950 0.64 +0.1
3,306,058 - AO353_14950 0.64 -0.0
3,306,058 - AO353_14950 0.64 +0.6
3,306,058 - AO353_14950 0.64 +0.1
3,306,058 - AO353_14950 0.64 +0.3
3,306,058 - AO353_14950 0.64 +0.4
3,306,058 - AO353_14950 0.64 -0.2
3,306,058 - AO353_14950 0.64 +0.6
3,306,058 - AO353_14950 0.64 +1.5
3,306,058 - AO353_14950 0.64 -0.2
3,306,058 - AO353_14950 0.64 -0.5
3,306,058 - AO353_14950 0.64 -0.9
3,306,058 - AO353_14950 0.64 -0.9
3,306,058 - AO353_14950 0.64 +0.4
3,306,058 - AO353_14950 0.64 +0.5
3,306,058 - AO353_14950 0.64 -0.9
3,306,058 - AO353_14950 0.64 -1.8
3,306,058 - AO353_14950 0.64 +0.9
3,306,058 - AO353_14950 0.64 +0.5
3,306,058 - AO353_14950 0.64 -0.0
3,306,058 - AO353_14950 0.64 +0.3
3,306,058 - AO353_14950 0.64 +0.7
3,306,058 - AO353_14950 0.64 -0.3
3,306,058 - AO353_14950 0.64 -0.9
3,306,075 - AO353_14950 0.67 +0.7
3,306,075 - AO353_14950 0.67 -0.7
3,306,121 - AO353_14950 0.75 -1.6
3,306,121 - AO353_14950 0.75 -0.7
3,306,121 - AO353_14950 0.75 +0.5
3,306,355 - +0.3
3,306,396 + +0.6
3,306,402 + -2.2
3,306,402 + -2.0
3,306,412 + +0.7
3,306,412 + -0.2
3,306,412 + -1.1
3,306,412 + +0.5
3,306,412 + -1.1
3,306,413 - +2.7
3,306,413 - +0.1
3,306,413 - -0.7
3,306,413 - -0.3
3,306,413 - +0.2
3,306,599 + -0.0
3,306,599 + -0.7
3,306,599 + +0.7
3,306,599 + -0.5
3,306,825 + -0.4
3,306,826 - +1.2
3,306,826 - +0.7
3,306,836 + -0.0
3,306,836 + -1.4
3,306,836 + +0.5
3,306,836 + +2.3
3,306,836 + -0.0
3,306,836 + +1.7
3,306,836 + +0.6
3,306,837 - -0.8
3,306,837 - -0.0
3,306,837 - +1.3
3,306,837 - -1.0
3,306,837 - -1.3
3,306,837 - -0.7
3,306,840 + +0.3
3,306,840 + -0.3
3,306,840 + -0.2
3,306,840 + -0.5
3,306,840 + +0.5
3,306,840 + +0.3
3,306,840 + +1.1
3,306,840 + -0.6
3,306,841 - -0.0
3,306,841 - -1.5
3,306,841 - -1.0
3,306,919 - AO353_14955 0.46 -1.5
3,306,999 + AO353_14955 0.85 +0.3
3,306,999 + AO353_14955 0.85 -0.4
3,306,999 + AO353_14955 0.85 +0.5
3,306,999 + AO353_14955 0.85 +1.6
3,306,999 + AO353_14955 0.85 +1.3
3,307,000 - AO353_14955 0.85 -2.1
3,307,000 - AO353_14955 0.85 +1.0
3,307,000 - AO353_14955 0.85 -1.1
3,307,074 + -0.5
3,307,074 + -0.3
3,307,075 - +1.5
3,307,103 + -0.4
3,307,104 - +0.5
3,307,104 - -0.9
3,307,104 - -0.3
3,307,104 - +0.3
3,307,111 - -1.4
3,307,111 - -1.6
3,307,111 - +2.0
3,307,198 + +0.3
3,307,199 - -0.7
3,307,201 - -1.4
3,307,224 + -0.3
3,307,224 + -0.6
3,307,224 + -1.4
3,307,224 + -0.6
3,307,224 + -0.8
3,307,224 + -0.5
3,307,224 + -1.0
3,307,225 - +0.1
3,307,225 - +2.3
3,307,225 - +0.6
3,307,225 - +1.3
3,307,470 - AO353_14960 0.89 -0.5
3,307,547 - +0.7
3,307,547 - -0.3
3,307,562 + -0.0
3,307,562 + -0.3
3,307,562 + -0.0
3,307,562 + -0.0
3,307,563 - +0.2
3,307,563 - -1.4
3,307,563 - +1.6
3,307,563 - -0.6
3,307,563 - -0.7
3,307,563 - -1.5

Or see this region's nucleotide sequence