Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14765 and AO353_14770 are separated by 1 nucleotides AO353_14770 and AO353_14775 are separated by 4 nucleotides AO353_14775 and AO353_14780 are separated by 216 nucleotides
AO353_14765: AO353_14765 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 3,270,107 to 3,270,958
_14765
AO353_14770: AO353_14770 - outer membrane lipoprotein LolB, at 3,270,960 to 3,271,577
_14770
AO353_14775: AO353_14775 - hypothetical protein, at 3,271,582 to 3,273,306
_14775
AO353_14780: AO353_14780 - glutamyl-tRNA reductase, at 3,273,523 to 3,274,812
_14780
Position (kb)
3271
3272
3273
3274 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3271.584 kb on - strand at 3271.584 kb on - strand at 3271.584 kb on - strand at 3271.584 kb on - strand at 3271.767 kb on - strand, within AO353_14775 at 3271.767 kb on - strand, within AO353_14775 at 3271.767 kb on - strand, within AO353_14775 at 3271.767 kb on - strand, within AO353_14775 at 3271.767 kb on - strand, within AO353_14775 at 3271.887 kb on - strand, within AO353_14775 at 3272.026 kb on - strand, within AO353_14775 at 3272.028 kb on - strand, within AO353_14775 at 3272.028 kb on - strand, within AO353_14775 at 3272.028 kb on - strand, within AO353_14775 at 3272.028 kb on - strand, within AO353_14775 at 3272.133 kb on - strand, within AO353_14775 at 3272.250 kb on - strand, within AO353_14775 at 3272.277 kb on - strand, within AO353_14775 at 3272.436 kb on - strand, within AO353_14775 at 3272.436 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.532 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.889 kb on - strand, within AO353_14775 at 3272.907 kb on - strand, within AO353_14775 at 3272.992 kb on - strand, within AO353_14775 at 3273.087 kb on - strand, within AO353_14775 at 3273.087 kb on - strand, within AO353_14775 at 3273.087 kb on - strand, within AO353_14775 at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.301 kb on - strand at 3273.307 kb on - strand at 3273.324 kb on - strand at 3273.324 kb on - strand at 3273.367 kb on + strand at 3273.367 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.423 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.425 kb on + strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.426 kb on - strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.427 kb on + strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.428 kb on - strand at 3273.438 kb on + strand at 3273.438 kb on + strand at 3273.439 kb on - strand at 3273.449 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 3,271,584 - +0.7 3,271,584 - -0.3 3,271,584 - -1.1 3,271,584 - +0.4 3,271,767 - AO353_14775 0.11 +1.5 3,271,767 - AO353_14775 0.11 +0.5 3,271,767 - AO353_14775 0.11 +1.0 3,271,767 - AO353_14775 0.11 +0.2 3,271,767 - AO353_14775 0.11 +1.1 3,271,887 - AO353_14775 0.18 +1.9 3,272,026 - AO353_14775 0.26 -0.7 3,272,028 - AO353_14775 0.26 -0.9 3,272,028 - AO353_14775 0.26 -0.8 3,272,028 - AO353_14775 0.26 +1.3 3,272,028 - AO353_14775 0.26 -0.5 3,272,133 - AO353_14775 0.32 -1.4 3,272,250 - AO353_14775 0.39 +1.6 3,272,277 - AO353_14775 0.40 +0.3 3,272,436 - AO353_14775 0.50 +0.1 3,272,436 - AO353_14775 0.50 +1.6 3,272,532 - AO353_14775 0.55 +1.7 3,272,532 - AO353_14775 0.55 -0.5 3,272,532 - AO353_14775 0.55 -0.0 3,272,532 - AO353_14775 0.55 -1.0 3,272,532 - AO353_14775 0.55 +0.7 3,272,532 - AO353_14775 0.55 +0.6 3,272,532 - AO353_14775 0.55 +1.3 3,272,532 - AO353_14775 0.55 +1.1 3,272,532 - AO353_14775 0.55 +1.3 3,272,889 - AO353_14775 0.76 -0.3 3,272,889 - AO353_14775 0.76 +1.0 3,272,889 - AO353_14775 0.76 +0.6 3,272,889 - AO353_14775 0.76 -0.0 3,272,889 - AO353_14775 0.76 +0.5 3,272,889 - AO353_14775 0.76 +0.7 3,272,907 - AO353_14775 0.77 +1.1 3,272,992 - AO353_14775 0.82 -0.6 3,273,087 - AO353_14775 0.87 -1.3 3,273,087 - AO353_14775 0.87 -1.1 3,273,087 - AO353_14775 0.87 +0.5 3,273,301 - -0.3 3,273,301 - +1.0 3,273,301 - +2.3 3,273,301 - +1.1 3,273,301 - -0.5 3,273,301 - +2.3 3,273,301 - +1.1 3,273,301 - +0.3 3,273,301 - +1.0 3,273,301 - -0.4 3,273,301 - -1.0 3,273,307 - +0.3 3,273,324 - +0.4 3,273,324 - -0.0 3,273,367 + +1.3 3,273,367 + +0.4 3,273,423 + -0.3 3,273,423 + +0.3 3,273,423 + -1.0 3,273,423 + -0.1 3,273,423 + +0.6 3,273,423 + +1.7 3,273,423 + -1.6 3,273,423 + -0.7 3,273,425 + +0.1 3,273,425 + -1.3 3,273,425 + -0.0 3,273,425 + +0.9 3,273,425 + +0.7 3,273,425 + +0.1 3,273,425 + +2.7 3,273,425 + +0.7 3,273,425 + +2.3 3,273,425 + +0.1 3,273,425 + -0.7 3,273,425 + +1.9 3,273,425 + +0.1 3,273,425 + -1.7 3,273,426 - -0.6 3,273,426 - -0.5 3,273,426 - -0.3 3,273,426 - -0.0 3,273,426 - +0.5 3,273,426 - -0.2 3,273,427 + -0.3 3,273,427 + +0.2 3,273,427 + +1.9 3,273,427 + -1.0 3,273,427 + +0.4 3,273,427 + -0.3 3,273,427 + -0.1 3,273,427 + +0.3 3,273,427 + +1.6 3,273,427 + -0.2 3,273,427 + +0.6 3,273,427 + +1.3 3,273,427 + +1.5 3,273,427 + -0.3 3,273,427 + -1.3 3,273,427 + +1.1 3,273,427 + -1.8 3,273,427 + +0.3 3,273,427 + -0.5 3,273,427 + +0.1 3,273,427 + -1.7 3,273,427 + +1.6 3,273,427 + -1.0 3,273,427 + +0.3 3,273,427 + +0.7 3,273,427 + -0.5 3,273,428 - +0.9 3,273,428 - -0.5 3,273,428 - +0.9 3,273,428 - +2.3 3,273,428 - -1.6 3,273,428 - -0.9 3,273,428 - -1.4 3,273,428 - -1.5 3,273,428 - +0.6 3,273,428 - -0.5 3,273,428 - -1.8 3,273,428 - -1.3 3,273,428 - +0.3 3,273,438 + +0.3 3,273,438 + -1.0 3,273,439 - +0.7 3,273,449 + -0.1
Or see this region's nucleotide sequence