Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14775

Experiment: L-Aspartic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_14765 and AO353_14770 are separated by 1 nucleotidesAO353_14770 and AO353_14775 are separated by 4 nucleotidesAO353_14775 and AO353_14780 are separated by 216 nucleotides AO353_14765: AO353_14765 - 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, at 3,270,107 to 3,270,958 _14765 AO353_14770: AO353_14770 - outer membrane lipoprotein LolB, at 3,270,960 to 3,271,577 _14770 AO353_14775: AO353_14775 - hypothetical protein, at 3,271,582 to 3,273,306 _14775 AO353_14780: AO353_14780 - glutamyl-tRNA reductase, at 3,273,523 to 3,274,812 _14780 Position (kb) 3271 3272 3273 3274Strain fitness (log2 ratio) -2 -1 0 1 2at 3271.584 kb on - strandat 3271.584 kb on - strandat 3271.584 kb on - strandat 3271.584 kb on - strandat 3271.767 kb on - strand, within AO353_14775at 3271.767 kb on - strand, within AO353_14775at 3271.767 kb on - strand, within AO353_14775at 3271.767 kb on - strand, within AO353_14775at 3271.767 kb on - strand, within AO353_14775at 3271.887 kb on - strand, within AO353_14775at 3272.026 kb on - strand, within AO353_14775at 3272.028 kb on - strand, within AO353_14775at 3272.028 kb on - strand, within AO353_14775at 3272.028 kb on - strand, within AO353_14775at 3272.028 kb on - strand, within AO353_14775at 3272.133 kb on - strand, within AO353_14775at 3272.250 kb on - strand, within AO353_14775at 3272.277 kb on - strand, within AO353_14775at 3272.436 kb on - strand, within AO353_14775at 3272.436 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.532 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.889 kb on - strand, within AO353_14775at 3272.907 kb on - strand, within AO353_14775at 3272.992 kb on - strand, within AO353_14775at 3273.087 kb on - strand, within AO353_14775at 3273.087 kb on - strand, within AO353_14775at 3273.087 kb on - strand, within AO353_14775at 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.301 kb on - strandat 3273.307 kb on - strandat 3273.324 kb on - strandat 3273.324 kb on - strandat 3273.367 kb on + strandat 3273.367 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.423 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.425 kb on + strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.426 kb on - strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.427 kb on + strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.428 kb on - strandat 3273.438 kb on + strandat 3273.438 kb on + strandat 3273.439 kb on - strandat 3273.449 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
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3,271,584 - +0.7
3,271,584 - -0.3
3,271,584 - -1.1
3,271,584 - +0.4
3,271,767 - AO353_14775 0.11 +1.5
3,271,767 - AO353_14775 0.11 +0.5
3,271,767 - AO353_14775 0.11 +1.0
3,271,767 - AO353_14775 0.11 +0.2
3,271,767 - AO353_14775 0.11 +1.1
3,271,887 - AO353_14775 0.18 +1.9
3,272,026 - AO353_14775 0.26 -0.7
3,272,028 - AO353_14775 0.26 -0.9
3,272,028 - AO353_14775 0.26 -0.8
3,272,028 - AO353_14775 0.26 +1.3
3,272,028 - AO353_14775 0.26 -0.5
3,272,133 - AO353_14775 0.32 -1.4
3,272,250 - AO353_14775 0.39 +1.6
3,272,277 - AO353_14775 0.40 +0.3
3,272,436 - AO353_14775 0.50 +0.1
3,272,436 - AO353_14775 0.50 +1.6
3,272,532 - AO353_14775 0.55 +1.7
3,272,532 - AO353_14775 0.55 -0.5
3,272,532 - AO353_14775 0.55 -0.0
3,272,532 - AO353_14775 0.55 -1.0
3,272,532 - AO353_14775 0.55 +0.7
3,272,532 - AO353_14775 0.55 +0.6
3,272,532 - AO353_14775 0.55 +1.3
3,272,532 - AO353_14775 0.55 +1.1
3,272,532 - AO353_14775 0.55 +1.3
3,272,889 - AO353_14775 0.76 -0.3
3,272,889 - AO353_14775 0.76 +1.0
3,272,889 - AO353_14775 0.76 +0.6
3,272,889 - AO353_14775 0.76 -0.0
3,272,889 - AO353_14775 0.76 +0.5
3,272,889 - AO353_14775 0.76 +0.7
3,272,907 - AO353_14775 0.77 +1.1
3,272,992 - AO353_14775 0.82 -0.6
3,273,087 - AO353_14775 0.87 -1.3
3,273,087 - AO353_14775 0.87 -1.1
3,273,087 - AO353_14775 0.87 +0.5
3,273,301 - -0.3
3,273,301 - +1.0
3,273,301 - +2.3
3,273,301 - +1.1
3,273,301 - -0.5
3,273,301 - +2.3
3,273,301 - +1.1
3,273,301 - +0.3
3,273,301 - +1.0
3,273,301 - -0.4
3,273,301 - -1.0
3,273,307 - +0.3
3,273,324 - +0.4
3,273,324 - -0.0
3,273,367 + +1.3
3,273,367 + +0.4
3,273,423 + -0.3
3,273,423 + +0.3
3,273,423 + -1.0
3,273,423 + -0.1
3,273,423 + +0.6
3,273,423 + +1.7
3,273,423 + -1.6
3,273,423 + -0.7
3,273,425 + +0.1
3,273,425 + -1.3
3,273,425 + -0.0
3,273,425 + +0.9
3,273,425 + +0.7
3,273,425 + +0.1
3,273,425 + +2.7
3,273,425 + +0.7
3,273,425 + +2.3
3,273,425 + +0.1
3,273,425 + -0.7
3,273,425 + +1.9
3,273,425 + +0.1
3,273,425 + -1.7
3,273,426 - -0.6
3,273,426 - -0.5
3,273,426 - -0.3
3,273,426 - -0.0
3,273,426 - +0.5
3,273,426 - -0.2
3,273,427 + -0.3
3,273,427 + +0.2
3,273,427 + +1.9
3,273,427 + -1.0
3,273,427 + +0.4
3,273,427 + -0.3
3,273,427 + -0.1
3,273,427 + +0.3
3,273,427 + +1.6
3,273,427 + -0.2
3,273,427 + +0.6
3,273,427 + +1.3
3,273,427 + +1.5
3,273,427 + -0.3
3,273,427 + -1.3
3,273,427 + +1.1
3,273,427 + -1.8
3,273,427 + +0.3
3,273,427 + -0.5
3,273,427 + +0.1
3,273,427 + -1.7
3,273,427 + +1.6
3,273,427 + -1.0
3,273,427 + +0.3
3,273,427 + +0.7
3,273,427 + -0.5
3,273,428 - +0.9
3,273,428 - -0.5
3,273,428 - +0.9
3,273,428 - +2.3
3,273,428 - -1.6
3,273,428 - -0.9
3,273,428 - -1.4
3,273,428 - -1.5
3,273,428 - +0.6
3,273,428 - -0.5
3,273,428 - -1.8
3,273,428 - -1.3
3,273,428 - +0.3
3,273,438 + +0.3
3,273,438 + -1.0
3,273,439 - +0.7
3,273,449 + -0.1

Or see this region's nucleotide sequence