Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14395 and AO353_14400 are separated by 712 nucleotides AO353_14400 and AO353_14405 are separated by 22 nucleotides
AO353_14395: AO353_14395 - poly(A) polymerase, at 3,191,183 to 3,192,586
_14395
AO353_14400: AO353_14400 - Fis family transcriptional regulator, at 3,193,299 to 3,194,732
_14400
AO353_14405: AO353_14405 - ATPase, at 3,194,755 to 3,197,703
_14405
Position (kb)
3193
3194
3195 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3192.314 kb on - strand, within AO353_14395 at 3192.314 kb on - strand, within AO353_14395 at 3192.314 kb on - strand, within AO353_14395 at 3192.542 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.653 kb on - strand at 3192.659 kb on + strand at 3192.660 kb on - strand at 3192.660 kb on - strand at 3192.660 kb on - strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.675 kb on + strand at 3192.676 kb on - strand at 3192.676 kb on - strand at 3192.676 kb on - strand at 3192.699 kb on - strand at 3192.736 kb on + strand at 3192.736 kb on + strand at 3192.736 kb on + strand at 3192.736 kb on + strand at 3192.736 kb on + strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.737 kb on - strand at 3192.765 kb on + strand at 3192.765 kb on + strand at 3192.765 kb on + strand at 3192.765 kb on + strand at 3192.765 kb on + strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.766 kb on - strand at 3192.778 kb on + strand at 3192.779 kb on - strand at 3192.779 kb on - strand at 3192.785 kb on - strand at 3192.785 kb on - strand at 3192.937 kb on - strand at 3192.984 kb on + strand at 3192.984 kb on + strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3192.985 kb on - strand at 3193.010 kb on + strand at 3193.010 kb on + strand at 3193.011 kb on - strand at 3193.011 kb on - strand at 3193.011 kb on - strand at 3193.014 kb on + strand at 3193.015 kb on - strand at 3193.061 kb on + strand at 3193.062 kb on - strand at 3193.062 kb on - strand at 3193.067 kb on + strand at 3193.067 kb on + strand at 3193.068 kb on - strand at 3193.068 kb on - strand at 3193.068 kb on - strand at 3193.068 kb on - strand at 3193.089 kb on + strand at 3193.089 kb on + strand at 3193.090 kb on - strand at 3193.101 kb on - strand at 3193.101 kb on - strand at 3193.109 kb on + strand at 3193.109 kb on + strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.110 kb on - strand at 3193.111 kb on + strand at 3193.111 kb on + strand at 3193.146 kb on - strand at 3193.159 kb on - strand at 3193.159 kb on - strand at 3193.212 kb on + strand at 3193.213 kb on - strand at 3193.229 kb on + strand at 3193.274 kb on + strand at 3193.275 kb on - strand at 3193.447 kb on + strand at 3193.448 kb on - strand, within AO353_14400 at 3193.448 kb on - strand, within AO353_14400 at 3193.657 kb on + strand, within AO353_14400 at 3193.657 kb on + strand, within AO353_14400 at 3193.658 kb on - strand, within AO353_14400 at 3193.813 kb on + strand, within AO353_14400 at 3193.814 kb on - strand, within AO353_14400 at 3193.816 kb on + strand, within AO353_14400 at 3193.817 kb on - strand, within AO353_14400 at 3193.817 kb on - strand, within AO353_14400 at 3193.817 kb on - strand, within AO353_14400 at 3193.887 kb on + strand, within AO353_14400 at 3193.888 kb on - strand, within AO353_14400 at 3193.888 kb on - strand, within AO353_14400 at 3194.217 kb on + strand, within AO353_14400 at 3194.217 kb on + strand, within AO353_14400 at 3194.218 kb on - strand, within AO353_14400 at 3194.449 kb on + strand, within AO353_14400 at 3194.500 kb on + strand, within AO353_14400 at 3194.663 kb on + strand at 3194.664 kb on - strand at 3194.664 kb on - strand at 3194.861 kb on + strand at 3195.092 kb on - strand, within AO353_14405 at 3195.092 kb on - strand, within AO353_14405 at 3195.092 kb on - strand, within AO353_14405 at 3195.092 kb on - strand, within AO353_14405 at 3195.515 kb on - strand, within AO353_14405 at 3195.515 kb on - strand, within AO353_14405 at 3195.515 kb on - strand, within AO353_14405
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 3,192,314 - AO353_14395 0.81 +0.3 3,192,314 - AO353_14395 0.81 -0.5 3,192,314 - AO353_14395 0.81 +0.8 3,192,542 - -1.8 3,192,653 - -1.6 3,192,653 - +0.1 3,192,653 - +0.8 3,192,653 - +0.3 3,192,653 - -1.1 3,192,653 - +1.0 3,192,653 - +1.0 3,192,659 + +0.3 3,192,660 - +0.8 3,192,660 - -0.9 3,192,660 - +1.3 3,192,675 + -0.5 3,192,675 + +1.3 3,192,675 + +0.9 3,192,675 + -0.5 3,192,675 + +0.4 3,192,675 + +2.3 3,192,676 - -1.2 3,192,676 - +0.3 3,192,676 - +2.3 3,192,699 - -0.8 3,192,736 + +1.3 3,192,736 + -1.7 3,192,736 + -0.5 3,192,736 + -0.0 3,192,736 + -0.2 3,192,737 - -0.2 3,192,737 - -0.2 3,192,737 - -0.2 3,192,737 - +1.9 3,192,737 - -1.2 3,192,737 - +0.3 3,192,765 + -1.2 3,192,765 + +1.9 3,192,765 + -0.7 3,192,765 + -0.1 3,192,765 + -0.9 3,192,766 - -0.4 3,192,766 - -1.6 3,192,766 - +1.9 3,192,766 - +0.8 3,192,766 - -0.3 3,192,766 - +0.8 3,192,766 - -0.8 3,192,766 - -0.5 3,192,766 - +0.4 3,192,766 - +0.3 3,192,778 + -1.3 3,192,779 - -1.0 3,192,779 - -0.2 3,192,785 - -1.0 3,192,785 - +0.8 3,192,937 - +0.6 3,192,984 + +0.0 3,192,984 + -0.5 3,192,985 - -0.9 3,192,985 - -0.8 3,192,985 - -0.5 3,192,985 - -1.1 3,192,985 - -2.6 3,192,985 - +1.0 3,193,010 + +0.3 3,193,010 + -0.5 3,193,011 - -1.0 3,193,011 - +0.3 3,193,011 - -0.1 3,193,014 + +0.1 3,193,015 - -1.4 3,193,061 + +0.9 3,193,062 - -1.6 3,193,062 - +0.5 3,193,067 + +0.6 3,193,067 + +0.3 3,193,068 - -0.8 3,193,068 - -0.1 3,193,068 - -1.1 3,193,068 - -0.5 3,193,089 + -0.1 3,193,089 + +0.3 3,193,090 - +0.0 3,193,101 - -0.2 3,193,101 - -0.0 3,193,109 + -1.5 3,193,109 + -1.6 3,193,110 - -0.8 3,193,110 - -0.2 3,193,110 - -1.1 3,193,110 - +1.3 3,193,110 - -1.7 3,193,110 - -0.8 3,193,111 + -1.6 3,193,111 + +1.3 3,193,146 - -0.5 3,193,159 - -2.1 3,193,159 - -0.5 3,193,212 + -0.3 3,193,213 - +0.2 3,193,229 + -0.4 3,193,274 + +1.3 3,193,275 - -2.1 3,193,447 + +1.3 3,193,448 - AO353_14400 0.10 -1.4 3,193,448 - AO353_14400 0.10 -1.6 3,193,657 + AO353_14400 0.25 -1.0 3,193,657 + AO353_14400 0.25 -1.8 3,193,658 - AO353_14400 0.25 +0.0 3,193,813 + AO353_14400 0.36 -2.0 3,193,814 - AO353_14400 0.36 -0.5 3,193,816 + AO353_14400 0.36 +0.3 3,193,817 - AO353_14400 0.36 -0.5 3,193,817 - AO353_14400 0.36 -0.2 3,193,817 - AO353_14400 0.36 +0.8 3,193,887 + AO353_14400 0.41 +0.0 3,193,888 - AO353_14400 0.41 -0.2 3,193,888 - AO353_14400 0.41 -1.5 3,194,217 + AO353_14400 0.64 -1.0 3,194,217 + AO353_14400 0.64 -1.0 3,194,218 - AO353_14400 0.64 -1.2 3,194,449 + AO353_14400 0.80 -0.7 3,194,500 + AO353_14400 0.84 -1.0 3,194,663 + +0.0 3,194,664 - +0.0 3,194,664 - -0.7 3,194,861 + +0.0 3,195,092 - AO353_14405 0.11 -0.8 3,195,092 - AO353_14405 0.11 +0.9 3,195,092 - AO353_14405 0.11 -0.7 3,195,092 - AO353_14405 0.11 -0.1 3,195,515 - AO353_14405 0.26 -1.9 3,195,515 - AO353_14405 0.26 -0.2 3,195,515 - AO353_14405 0.26 -1.2
Or see this region's nucleotide sequence