Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14215 and AO353_14220 are separated by 152 nucleotides AO353_14220 and AO353_14225 overlap by 4 nucleotides AO353_14225 and AO353_14230 are separated by 129 nucleotides
AO353_14215: AO353_14215 - DNA transporter, at 3,156,408 to 3,157,424
_14215
AO353_14220: AO353_14220 - ribosomal large subunit pseudouridine synthase D, at 3,157,577 to 3,158,539
_14220
AO353_14225: AO353_14225 - laccase, at 3,158,536 to 3,159,261
_14225
AO353_14230: AO353_14230 - ATP-dependent chaperone ClpB, at 3,159,391 to 3,161,955
_14230
Position (kb)
3157
3158
3159 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3157.441 kb on - strand at 3157.441 kb on - strand at 3157.476 kb on - strand at 3157.476 kb on - strand at 3157.520 kb on - strand at 3157.520 kb on - strand at 3157.524 kb on - strand at 3157.567 kb on + strand at 3157.567 kb on + strand at 3157.567 kb on + strand at 3157.657 kb on - strand at 3157.835 kb on + strand, within AO353_14220 at 3158.085 kb on - strand, within AO353_14220 at 3158.270 kb on - strand, within AO353_14220 at 3158.579 kb on + strand at 3158.579 kb on + strand at 3158.580 kb on - strand at 3158.712 kb on + strand, within AO353_14225 at 3158.749 kb on - strand, within AO353_14225 at 3158.758 kb on + strand, within AO353_14225 at 3158.758 kb on + strand, within AO353_14225 at 3158.758 kb on + strand, within AO353_14225 at 3158.758 kb on + strand, within AO353_14225 at 3158.758 kb on + strand, within AO353_14225 at 3158.759 kb on - strand, within AO353_14225 at 3158.759 kb on - strand, within AO353_14225 at 3158.823 kb on + strand, within AO353_14225 at 3158.823 kb on + strand, within AO353_14225 at 3158.824 kb on - strand, within AO353_14225 at 3158.824 kb on - strand, within AO353_14225 at 3158.954 kb on + strand, within AO353_14225 at 3159.098 kb on + strand, within AO353_14225 at 3159.099 kb on - strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.112 kb on + strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.113 kb on - strand, within AO353_14225 at 3159.114 kb on + strand, within AO353_14225 at 3159.114 kb on + strand, within AO353_14225 at 3159.114 kb on + strand, within AO353_14225 at 3159.114 kb on + strand, within AO353_14225 at 3159.114 kb on + strand, within AO353_14225 at 3159.114 kb on + strand, within AO353_14225 at 3159.115 kb on - strand, within AO353_14225 at 3159.115 kb on - strand, within AO353_14225 at 3159.150 kb on + strand, within AO353_14225 at 3159.151 kb on - strand, within AO353_14225 at 3159.151 kb on - strand, within AO353_14225 at 3159.161 kb on - strand, within AO353_14225 at 3159.265 kb on + strand at 3159.265 kb on + strand at 3159.265 kb on + strand at 3159.265 kb on + strand at 3159.266 kb on - strand at 3159.266 kb on - strand at 3159.266 kb on - strand at 3159.266 kb on - strand at 3159.266 kb on - strand at 3159.266 kb on - strand at 3159.319 kb on + strand at 3159.320 kb on - strand at 3159.320 kb on - strand at 3159.344 kb on + strand at 3159.344 kb on + strand at 3159.344 kb on + strand at 3159.345 kb on - strand at 3159.345 kb on - strand at 3159.348 kb on + strand at 3159.348 kb on + strand at 3159.348 kb on + strand at 3159.349 kb on - strand at 3159.349 kb on - strand at 3159.349 kb on - strand at 3159.349 kb on - strand at 3159.349 kb on - strand at 3159.349 kb on - strand at 3159.397 kb on - strand at 3159.397 kb on - strand at 3159.397 kb on - strand at 3159.397 kb on - strand at 3159.397 kb on - strand at 3159.398 kb on + strand at 3159.398 kb on + strand at 3159.398 kb on + strand at 3159.398 kb on + strand at 3159.398 kb on + strand at 3159.398 kb on + strand at 3159.399 kb on - strand at 3159.408 kb on - strand at 3159.414 kb on + strand at 3159.415 kb on - strand at 3159.426 kb on - strand at 3159.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 3,157,441 - -0.4 3,157,441 - +0.6 3,157,476 - +0.0 3,157,476 - +0.8 3,157,520 - +2.0 3,157,520 - +0.3 3,157,524 - +0.3 3,157,567 + -0.5 3,157,567 + -1.0 3,157,567 + -0.0 3,157,657 - +0.8 3,157,835 + AO353_14220 0.27 -1.1 3,158,085 - AO353_14220 0.53 +0.2 3,158,270 - AO353_14220 0.72 +0.3 3,158,579 + -2.0 3,158,579 + +0.8 3,158,580 - +0.1 3,158,712 + AO353_14225 0.24 -0.2 3,158,749 - AO353_14225 0.29 -0.5 3,158,758 + AO353_14225 0.31 -0.7 3,158,758 + AO353_14225 0.31 +0.4 3,158,758 + AO353_14225 0.31 -0.2 3,158,758 + AO353_14225 0.31 +0.1 3,158,758 + AO353_14225 0.31 +0.6 3,158,759 - AO353_14225 0.31 +0.0 3,158,759 - AO353_14225 0.31 -0.5 3,158,823 + AO353_14225 0.40 +0.3 3,158,823 + AO353_14225 0.40 -1.8 3,158,824 - AO353_14225 0.40 -0.7 3,158,824 - AO353_14225 0.40 +0.0 3,158,954 + AO353_14225 0.58 -0.7 3,159,098 + AO353_14225 0.77 +0.0 3,159,099 - AO353_14225 0.78 -0.1 3,159,112 + AO353_14225 0.79 -2.0 3,159,112 + AO353_14225 0.79 +0.8 3,159,112 + AO353_14225 0.79 +0.8 3,159,112 + AO353_14225 0.79 -0.5 3,159,112 + AO353_14225 0.79 +2.2 3,159,112 + AO353_14225 0.79 +0.8 3,159,112 + AO353_14225 0.79 -0.1 3,159,112 + AO353_14225 0.79 -1.6 3,159,112 + AO353_14225 0.79 +0.3 3,159,112 + AO353_14225 0.79 +0.3 3,159,112 + AO353_14225 0.79 +0.3 3,159,112 + AO353_14225 0.79 +0.9 3,159,112 + AO353_14225 0.79 +1.8 3,159,112 + AO353_14225 0.79 +0.0 3,159,112 + AO353_14225 0.79 -1.3 3,159,112 + AO353_14225 0.79 +0.3 3,159,112 + AO353_14225 0.79 -1.5 3,159,112 + AO353_14225 0.79 +0.8 3,159,112 + AO353_14225 0.79 +1.3 3,159,112 + AO353_14225 0.79 -0.5 3,159,112 + AO353_14225 0.79 +0.3 3,159,112 + AO353_14225 0.79 -1.5 3,159,113 - AO353_14225 0.79 +1.0 3,159,113 - AO353_14225 0.79 +0.5 3,159,113 - AO353_14225 0.79 +1.5 3,159,113 - AO353_14225 0.79 -0.2 3,159,113 - AO353_14225 0.79 -0.8 3,159,113 - AO353_14225 0.79 -1.0 3,159,113 - AO353_14225 0.79 -1.6 3,159,113 - AO353_14225 0.79 +1.0 3,159,113 - AO353_14225 0.79 +0.2 3,159,113 - AO353_14225 0.79 -1.9 3,159,113 - AO353_14225 0.79 +0.8 3,159,113 - AO353_14225 0.79 +1.0 3,159,113 - AO353_14225 0.79 -0.2 3,159,113 - AO353_14225 0.79 -1.4 3,159,113 - AO353_14225 0.79 -0.9 3,159,113 - AO353_14225 0.79 -1.9 3,159,113 - AO353_14225 0.79 -0.4 3,159,114 + AO353_14225 0.80 +0.3 3,159,114 + AO353_14225 0.80 -1.2 3,159,114 + AO353_14225 0.80 -0.1 3,159,114 + AO353_14225 0.80 -1.0 3,159,114 + AO353_14225 0.80 -0.8 3,159,114 + AO353_14225 0.80 +0.5 3,159,115 - AO353_14225 0.80 +0.5 3,159,115 - AO353_14225 0.80 +0.3 3,159,150 + AO353_14225 0.85 +0.1 3,159,151 - AO353_14225 0.85 -0.2 3,159,151 - AO353_14225 0.85 -0.8 3,159,161 - AO353_14225 0.86 -1.5 3,159,265 + +1.2 3,159,265 + -0.2 3,159,265 + -0.3 3,159,265 + -0.2 3,159,266 - -0.0 3,159,266 - +1.0 3,159,266 - -1.4 3,159,266 - -0.9 3,159,266 - +0.2 3,159,266 - -0.4 3,159,319 + +2.3 3,159,320 - +0.5 3,159,320 - -0.7 3,159,344 + +0.5 3,159,344 + -0.5 3,159,344 + +0.8 3,159,345 - -1.8 3,159,345 - -0.2 3,159,348 + +0.0 3,159,348 + +0.1 3,159,348 + +0.8 3,159,349 - +0.7 3,159,349 - +1.0 3,159,349 - -0.7 3,159,349 - +1.1 3,159,349 - -1.2 3,159,349 - -1.2 3,159,397 - -0.7 3,159,397 - +0.9 3,159,397 - +0.3 3,159,397 - +0.2 3,159,397 - -0.7 3,159,398 + -1.0 3,159,398 + +1.0 3,159,398 + +1.2 3,159,398 + +0.5 3,159,398 + -0.1 3,159,398 + +0.5 3,159,399 - -0.4 3,159,408 - -1.4 3,159,414 + -1.6 3,159,415 - +2.3 3,159,426 - -0.1 3,159,426 - +2.3
Or see this region's nucleotide sequence