Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12920 and AO353_12925 overlap by 1 nucleotides AO353_12925 and AO353_12930 are separated by 8 nucleotides AO353_12930 and AO353_12935 are separated by 84 nucleotides
AO353_12920: AO353_12920 - glycosyl transferase, at 2,860,518 to 2,861,648
_12920
AO353_12925: AO353_12925 - acetyltransferase, at 2,861,648 to 2,862,544
_12925
AO353_12930: AO353_12930 - GlcNAc-PI de-N-acetylase, at 2,862,553 to 2,863,968
_12930
AO353_12935: AO353_12935 - glycosyltransferase, at 2,864,053 to 2,865,009
_12935
Position (kb)
2862
2863
2864 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2862.540 kb on + strand at 2862.540 kb on + strand at 2862.603 kb on + strand at 2862.739 kb on + strand, within AO353_12930 at 2862.968 kb on + strand, within AO353_12930 at 2862.982 kb on + strand, within AO353_12930 at 2863.351 kb on + strand, within AO353_12930 at 2863.351 kb on + strand, within AO353_12930 at 2863.648 kb on - strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.754 kb on + strand, within AO353_12930 at 2863.772 kb on + strand, within AO353_12930 at 2863.966 kb on + strand at 2863.966 kb on + strand at 2863.966 kb on + strand at 2863.966 kb on + strand at 2864.063 kb on + strand at 2864.063 kb on + strand at 2864.063 kb on + strand at 2864.220 kb on + strand, within AO353_12935 at 2864.320 kb on + strand, within AO353_12935 at 2864.320 kb on + strand, within AO353_12935 at 2864.320 kb on + strand, within AO353_12935 at 2864.320 kb on + strand, within AO353_12935 at 2864.335 kb on + strand, within AO353_12935 at 2864.335 kb on + strand, within AO353_12935 at 2864.335 kb on + strand, within AO353_12935 at 2864.359 kb on + strand, within AO353_12935 at 2864.523 kb on + strand, within AO353_12935 at 2864.539 kb on + strand, within AO353_12935 at 2864.775 kb on + strand, within AO353_12935 at 2864.913 kb on + strand, within AO353_12935 at 2864.913 kb on + strand, within AO353_12935 at 2864.913 kb on + strand, within AO353_12935 at 2864.925 kb on + strand at 2864.925 kb on + strand at 2864.925 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 2,862,540 + -1.1 2,862,540 + -0.6 2,862,603 + -0.6 2,862,739 + AO353_12930 0.13 +0.4 2,862,968 + AO353_12930 0.29 +0.4 2,862,982 + AO353_12930 0.30 -0.4 2,863,351 + AO353_12930 0.56 +1.0 2,863,351 + AO353_12930 0.56 -1.3 2,863,648 - AO353_12930 0.77 -1.0 2,863,754 + AO353_12930 0.85 -1.3 2,863,754 + AO353_12930 0.85 -1.1 2,863,754 + AO353_12930 0.85 +0.6 2,863,754 + AO353_12930 0.85 -0.5 2,863,754 + AO353_12930 0.85 -1.9 2,863,754 + AO353_12930 0.85 -1.4 2,863,772 + AO353_12930 0.86 +0.7 2,863,966 + -0.2 2,863,966 + +1.3 2,863,966 + +0.3 2,863,966 + -0.9 2,864,063 + +1.1 2,864,063 + +0.6 2,864,063 + -0.9 2,864,220 + AO353_12935 0.17 +0.4 2,864,320 + AO353_12935 0.28 -1.5 2,864,320 + AO353_12935 0.28 -1.7 2,864,320 + AO353_12935 0.28 -0.9 2,864,320 + AO353_12935 0.28 -0.4 2,864,335 + AO353_12935 0.29 +0.4 2,864,335 + AO353_12935 0.29 -1.2 2,864,335 + AO353_12935 0.29 -0.4 2,864,359 + AO353_12935 0.32 +0.4 2,864,523 + AO353_12935 0.49 -0.2 2,864,539 + AO353_12935 0.51 -0.6 2,864,775 + AO353_12935 0.75 -1.0 2,864,913 + AO353_12935 0.90 -0.0 2,864,913 + AO353_12935 0.90 -2.6 2,864,913 + AO353_12935 0.90 +0.8 2,864,925 + -0.6 2,864,925 + +3.0 2,864,925 + -0.9
Or see this region's nucleotide sequence