Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12455 and AO353_12460 are separated by 181 nucleotides
AO353_12455: AO353_12455 - nuclease, at 2,739,390 to 2,740,208
_12455
AO353_12460: AO353_12460 - malate dehydrogenase, at 2,740,390 to 2,741,658
_12460
Position (kb)
2740
2741
2742 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2739.407 kb on - strand at 2739.407 kb on - strand at 2739.407 kb on - strand at 2739.455 kb on + strand at 2739.455 kb on + strand at 2739.456 kb on - strand at 2739.599 kb on + strand, within AO353_12455 at 2739.756 kb on + strand, within AO353_12455 at 2739.756 kb on + strand, within AO353_12455 at 2739.756 kb on + strand, within AO353_12455 at 2739.756 kb on + strand, within AO353_12455 at 2739.756 kb on + strand, within AO353_12455 at 2739.757 kb on - strand, within AO353_12455 at 2739.757 kb on - strand, within AO353_12455 at 2739.913 kb on + strand, within AO353_12455 at 2740.025 kb on - strand, within AO353_12455 at 2740.286 kb on + strand at 2740.346 kb on - strand at 2740.346 kb on - strand at 2740.372 kb on + strand at 2740.372 kb on + strand at 2740.373 kb on - strand at 2740.444 kb on - strand at 2740.444 kb on - strand at 2740.501 kb on + strand at 2740.502 kb on - strand at 2740.502 kb on - strand at 2740.559 kb on - strand, within AO353_12460 at 2740.559 kb on - strand, within AO353_12460 at 2740.564 kb on + strand, within AO353_12460 at 2740.564 kb on + strand, within AO353_12460 at 2740.564 kb on + strand, within AO353_12460 at 2740.565 kb on - strand, within AO353_12460 at 2740.565 kb on - strand, within AO353_12460 at 2740.565 kb on - strand, within AO353_12460 at 2740.627 kb on - strand, within AO353_12460 at 2740.665 kb on + strand, within AO353_12460 at 2740.665 kb on + strand, within AO353_12460 at 2740.665 kb on + strand, within AO353_12460 at 2740.665 kb on + strand, within AO353_12460 at 2740.666 kb on - strand at 2740.666 kb on - strand, within AO353_12460 at 2740.666 kb on - strand, within AO353_12460 at 2740.761 kb on + strand, within AO353_12460 at 2740.761 kb on + strand, within AO353_12460 at 2740.761 kb on + strand, within AO353_12460 at 2740.761 kb on + strand, within AO353_12460 at 2740.761 kb on + strand, within AO353_12460 at 2740.762 kb on - strand, within AO353_12460 at 2740.762 kb on - strand, within AO353_12460 at 2740.762 kb on - strand, within AO353_12460 at 2740.762 kb on - strand, within AO353_12460 at 2740.762 kb on - strand, within AO353_12460 at 2740.762 kb on - strand, within AO353_12460 at 2740.762 kb on - strand, within AO353_12460 at 2740.983 kb on + strand, within AO353_12460 at 2740.984 kb on - strand, within AO353_12460 at 2741.089 kb on + strand, within AO353_12460 at 2741.089 kb on + strand, within AO353_12460 at 2741.089 kb on + strand, within AO353_12460 at 2741.089 kb on + strand, within AO353_12460 at 2741.089 kb on + strand, within AO353_12460 at 2741.089 kb on + strand, within AO353_12460 at 2741.090 kb on - strand, within AO353_12460 at 2741.090 kb on - strand, within AO353_12460 at 2741.342 kb on + strand, within AO353_12460 at 2741.342 kb on + strand, within AO353_12460 at 2741.342 kb on + strand, within AO353_12460 at 2741.342 kb on + strand, within AO353_12460 at 2741.342 kb on + strand, within AO353_12460 at 2741.343 kb on - strand, within AO353_12460 at 2741.343 kb on - strand, within AO353_12460 at 2741.343 kb on - strand, within AO353_12460 at 2741.479 kb on + strand, within AO353_12460 at 2741.479 kb on + strand, within AO353_12460 at 2741.480 kb on - strand, within AO353_12460 at 2741.512 kb on + strand, within AO353_12460 at 2741.512 kb on + strand, within AO353_12460 at 2741.512 kb on + strand, within AO353_12460 at 2741.512 kb on + strand, within AO353_12460 at 2741.512 kb on + strand, within AO353_12460 at 2741.513 kb on - strand, within AO353_12460 at 2741.513 kb on - strand, within AO353_12460 at 2741.513 kb on - strand, within AO353_12460 at 2741.513 kb on - strand, within AO353_12460 at 2741.513 kb on - strand, within AO353_12460 at 2741.513 kb on - strand, within AO353_12460 at 2741.620 kb on + strand at 2741.657 kb on - strand at 2741.666 kb on + strand at 2741.666 kb on + strand at 2741.666 kb on + strand at 2741.666 kb on + strand at 2741.667 kb on - strand at 2741.667 kb on - strand at 2741.667 kb on - strand at 2741.714 kb on + strand at 2741.714 kb on + strand at 2741.714 kb on + strand at 2741.714 kb on + strand at 2741.714 kb on + strand at 2741.714 kb on + strand at 2741.715 kb on - strand at 2741.734 kb on - strand at 2741.734 kb on - strand at 2741.734 kb on - strand at 2741.750 kb on + strand at 2741.750 kb on + strand at 2741.750 kb on + strand at 2741.750 kb on + strand at 2741.792 kb on + strand at 2741.793 kb on - strand at 2741.793 kb on - strand at 2741.807 kb on + strand at 2741.807 kb on + strand at 2741.807 kb on + strand at 2741.807 kb on + strand at 2741.807 kb on + strand at 2741.807 kb on + strand at 2741.807 kb on + strand at 2741.807 kb on + strand at 2741.807 kb on + strand at 2741.808 kb on - strand at 2741.808 kb on - strand at 2741.808 kb on - strand at 2741.808 kb on - strand at 2741.808 kb on - strand at 2741.808 kb on - strand at 2741.808 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.880 kb on - strand at 2741.909 kb on + strand at 2741.956 kb on - strand at 2741.956 kb on - strand at 2741.956 kb on - strand at 2741.956 kb on - strand at 2741.956 kb on - strand at 2742.318 kb on + strand at 2742.318 kb on + strand at 2742.318 kb on + strand at 2742.318 kb on + strand at 2742.318 kb on + strand at 2742.318 kb on + strand at 2742.319 kb on - strand at 2742.319 kb on - strand at 2742.319 kb on - strand at 2742.319 kb on - strand at 2742.328 kb on - strand at 2742.368 kb on + strand at 2742.368 kb on + strand at 2742.368 kb on + strand at 2742.368 kb on + strand at 2742.368 kb on + strand at 2742.368 kb on + strand at 2742.368 kb on + strand at 2742.368 kb on + strand at 2742.368 kb on + strand at 2742.369 kb on - strand at 2742.369 kb on - strand at 2742.369 kb on - strand at 2742.369 kb on - strand at 2742.369 kb on - strand at 2742.369 kb on - strand at 2742.369 kb on - strand at 2742.369 kb on - strand at 2742.369 kb on - strand at 2742.389 kb on + strand at 2742.389 kb on + strand at 2742.467 kb on + strand at 2742.467 kb on + strand at 2742.467 kb on + strand at 2742.467 kb on + strand at 2742.468 kb on - strand at 2742.496 kb on + strand at 2742.496 kb on + strand at 2742.496 kb on + strand at 2742.496 kb on + strand at 2742.496 kb on + strand at 2742.497 kb on - strand at 2742.497 kb on - strand at 2742.497 kb on - strand at 2742.638 kb on + strand at 2742.638 kb on + strand at 2742.638 kb on + strand at 2742.639 kb on - strand at 2742.639 kb on - strand at 2742.639 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 2,739,407 - +1.5 2,739,407 - -1.1 2,739,407 - +2.5 2,739,455 + +1.5 2,739,455 + -0.5 2,739,456 - +0.9 2,739,599 + AO353_12455 0.26 +0.4 2,739,756 + AO353_12455 0.45 -0.7 2,739,756 + AO353_12455 0.45 +0.9 2,739,756 + AO353_12455 0.45 +0.5 2,739,756 + AO353_12455 0.45 +0.5 2,739,756 + AO353_12455 0.45 -1.5 2,739,757 - AO353_12455 0.45 -0.7 2,739,757 - AO353_12455 0.45 +1.9 2,739,913 + AO353_12455 0.64 -0.2 2,740,025 - AO353_12455 0.78 +0.4 2,740,286 + -0.8 2,740,346 - -2.9 2,740,346 - -0.9 2,740,372 + -1.3 2,740,372 + -0.5 2,740,373 - -0.1 2,740,444 - -0.5 2,740,444 - -1.4 2,740,501 + +0.2 2,740,502 - -1.1 2,740,502 - -1.9 2,740,559 - AO353_12460 0.13 -0.3 2,740,559 - AO353_12460 0.13 -0.7 2,740,564 + AO353_12460 0.14 -0.5 2,740,564 + AO353_12460 0.14 -0.6 2,740,564 + AO353_12460 0.14 +0.5 2,740,565 - AO353_12460 0.14 -1.5 2,740,565 - AO353_12460 0.14 +0.8 2,740,565 - AO353_12460 0.14 +0.5 2,740,627 - AO353_12460 0.19 +1.5 2,740,665 + AO353_12460 0.22 +0.3 2,740,665 + AO353_12460 0.22 -0.5 2,740,665 + AO353_12460 0.22 -0.3 2,740,665 + AO353_12460 0.22 -1.7 2,740,666 - -0.7 2,740,666 - AO353_12460 0.22 -0.8 2,740,666 - AO353_12460 0.22 -0.9 2,740,761 + AO353_12460 0.29 -0.5 2,740,761 + AO353_12460 0.29 +0.1 2,740,761 + AO353_12460 0.29 +1.9 2,740,761 + AO353_12460 0.29 -0.5 2,740,761 + AO353_12460 0.29 -1.0 2,740,762 - AO353_12460 0.29 -0.5 2,740,762 - AO353_12460 0.29 -0.1 2,740,762 - AO353_12460 0.29 -0.9 2,740,762 - AO353_12460 0.29 +0.5 2,740,762 - AO353_12460 0.29 -0.1 2,740,762 - AO353_12460 0.29 +0.2 2,740,762 - AO353_12460 0.29 +2.5 2,740,983 + AO353_12460 0.47 -0.1 2,740,984 - AO353_12460 0.47 -1.7 2,741,089 + AO353_12460 0.55 -0.7 2,741,089 + AO353_12460 0.55 -1.2 2,741,089 + AO353_12460 0.55 +1.2 2,741,089 + AO353_12460 0.55 +0.5 2,741,089 + AO353_12460 0.55 -0.9 2,741,089 + AO353_12460 0.55 -1.5 2,741,090 - AO353_12460 0.55 -0.1 2,741,090 - AO353_12460 0.55 -0.8 2,741,342 + AO353_12460 0.75 -0.5 2,741,342 + AO353_12460 0.75 -1.7 2,741,342 + AO353_12460 0.75 -1.1 2,741,342 + AO353_12460 0.75 +0.5 2,741,342 + AO353_12460 0.75 -0.5 2,741,343 - AO353_12460 0.75 -0.5 2,741,343 - AO353_12460 0.75 -0.7 2,741,343 - AO353_12460 0.75 -0.7 2,741,479 + AO353_12460 0.86 +0.5 2,741,479 + AO353_12460 0.86 +0.1 2,741,480 - AO353_12460 0.86 -0.8 2,741,512 + AO353_12460 0.88 -1.7 2,741,512 + AO353_12460 0.88 -0.5 2,741,512 + AO353_12460 0.88 -0.5 2,741,512 + AO353_12460 0.88 -1.7 2,741,512 + AO353_12460 0.88 -0.1 2,741,513 - AO353_12460 0.88 -1.4 2,741,513 - AO353_12460 0.88 -0.5 2,741,513 - AO353_12460 0.88 -0.3 2,741,513 - AO353_12460 0.88 -0.2 2,741,513 - AO353_12460 0.88 -0.5 2,741,513 - AO353_12460 0.88 +1.1 2,741,620 + +0.9 2,741,657 - +0.3 2,741,666 + +0.5 2,741,666 + -0.5 2,741,666 + -0.5 2,741,666 + -0.1 2,741,667 - +0.5 2,741,667 - +0.5 2,741,667 - -0.3 2,741,714 + -0.4 2,741,714 + +0.1 2,741,714 + -0.9 2,741,714 + +0.5 2,741,714 + -1.1 2,741,714 + -0.3 2,741,715 - +0.2 2,741,734 - +0.2 2,741,734 - +0.4 2,741,734 - +1.1 2,741,750 + -0.3 2,741,750 + +1.9 2,741,750 + +0.6 2,741,750 + -0.1 2,741,792 + -0.9 2,741,793 - -0.3 2,741,793 - +0.4 2,741,807 + -0.8 2,741,807 + +0.5 2,741,807 + -1.8 2,741,807 + +1.1 2,741,807 + +0.1 2,741,807 + -0.7 2,741,807 + -0.3 2,741,807 + -0.3 2,741,807 + +0.9 2,741,808 - +0.2 2,741,808 - -0.0 2,741,808 - -3.3 2,741,808 - -0.4 2,741,808 - +0.1 2,741,808 - -1.5 2,741,808 - -1.3 2,741,880 - +0.9 2,741,880 - +0.3 2,741,880 - +0.4 2,741,880 - -0.7 2,741,880 - -1.5 2,741,880 - +0.2 2,741,880 - +0.1 2,741,880 - -0.3 2,741,880 - +0.2 2,741,880 - +0.9 2,741,880 - -1.8 2,741,880 - +0.9 2,741,880 - -0.4 2,741,880 - +0.1 2,741,880 - -0.1 2,741,880 - +0.9 2,741,880 - -1.4 2,741,880 - +0.3 2,741,880 - +0.4 2,741,880 - +0.5 2,741,880 - -0.2 2,741,880 - +0.2 2,741,880 - -0.2 2,741,880 - -1.4 2,741,880 - +0.3 2,741,880 - +3.5 2,741,880 - -0.5 2,741,909 + -0.5 2,741,956 - -0.8 2,741,956 - +0.9 2,741,956 - +1.1 2,741,956 - -1.2 2,741,956 - -1.3 2,742,318 + -0.1 2,742,318 + +1.9 2,742,318 + -0.4 2,742,318 + +0.0 2,742,318 + +0.8 2,742,318 + -0.7 2,742,319 - -0.8 2,742,319 - +0.7 2,742,319 - -0.0 2,742,319 - -0.2 2,742,328 - +0.7 2,742,368 + -2.0 2,742,368 + -0.6 2,742,368 + +0.9 2,742,368 + +0.3 2,742,368 + -0.5 2,742,368 + -0.3 2,742,368 + +0.7 2,742,368 + +1.8 2,742,368 + -0.7 2,742,369 - -0.9 2,742,369 - -0.3 2,742,369 - -0.0 2,742,369 - +2.1 2,742,369 - +1.2 2,742,369 - -2.2 2,742,369 - +1.4 2,742,369 - -1.2 2,742,369 - -0.5 2,742,389 + -0.9 2,742,389 + +0.3 2,742,467 + +0.8 2,742,467 + +0.7 2,742,467 + -2.2 2,742,467 + -0.6 2,742,468 - +0.2 2,742,496 + -1.7 2,742,496 + +1.8 2,742,496 + -1.2 2,742,496 + +1.1 2,742,496 + +1.1 2,742,497 - +1.1 2,742,497 - +0.2 2,742,497 - +0.2 2,742,638 + +0.7 2,742,638 + -2.1 2,742,638 + +0.7 2,742,639 - -1.9 2,742,639 - -0.1 2,742,639 - -0.2
Or see this region's nucleotide sequence