Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12115

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
2,661,129	+		AO353_12110	0.47	+0.5
2,661,130	-		AO353_12110	0.47	+0.2
2,661,135	-		AO353_12110	0.48	-1.2
2,661,135	-		AO353_12110	0.48	+1.3
2,661,385	+		AO353_12110	0.67	+0.2
2,661,385	+		AO353_12110	0.67	+0.6
2,661,385	+		AO353_12110	0.67	-1.0
2,661,385	+		AO353_12110	0.67	-0.5
2,661,386	-		AO353_12110	0.67	+0.2
2,661,386	-		AO353_12110	0.67	-0.3
2,661,391	+		AO353_12110	0.67	+0.2
2,661,391	+		AO353_12110	0.67	+1.1
2,661,391	+		AO353_12110	0.67	+1.3
2,661,391	+		AO353_12110	0.67	-0.1
2,661,392	-		AO353_12110	0.68	-0.5
2,661,392	-		AO353_12110	0.68	-0.9
2,661,392	-		AO353_12110	0.68	+1.4
2,661,394	+		AO353_12110	0.68	+0.8
2,661,394	+		AO353_12110	0.68	-1.0
2,661,394	+		AO353_12110	0.68	-1.4
2,661,394	+		AO353_12110	0.68	-0.5
2,661,394	+		AO353_12110	0.68	+1.9
2,661,394	+		AO353_12110	0.68	+2.0
2,661,394	+		AO353_12110	0.68	-0.3
2,661,394	+		AO353_12110	0.68	+0.9
2,661,394	+		AO353_12110	0.68	+0.5
2,661,394	+		AO353_12110	0.68	+0.4
2,661,394	+		AO353_12110	0.68	-1.6
2,661,394	+		AO353_12110	0.68	-0.6
2,661,394	+		AO353_12110	0.68	-0.3
2,661,394	+		AO353_12110	0.68	+0.3
2,661,395	-		AO353_12110	0.68	-0.0
2,661,395	-		AO353_12110	0.68	-0.2
2,661,395	-		AO353_12110	0.68	+0.8
2,661,395	-		AO353_12110	0.68	-2.4
2,661,395	-		AO353_12110	0.68	-1.0
2,661,395	-		AO353_12110	0.68	+0.5
2,661,451	+		AO353_12110	0.72	-0.2
2,661,451	+		AO353_12110	0.72	-0.5
2,661,452	-		AO353_12110	0.72	+0.8
2,661,558	+		AO353_12110	0.80	+0.4
2,661,558	+		AO353_12110	0.80	+1.2
2,661,558	+		AO353_12110	0.80	-0.0
2,661,558	+		AO353_12110	0.80	+0.7
2,661,812	+				-0.3
2,661,813	-				+0.5
2,661,813	-				+1.0
2,661,813	-				+0.2
2,661,813	-				+0.7
2,661,847	+				-0.9
2,661,847	+				+1.5
2,661,847	+				+1.7
2,661,847	+				+0.1
2,661,847	+				+1.2
2,661,847	+				+1.2
2,661,847	+				-0.8
2,661,847	+				-1.4
2,661,847	+				-0.3
2,661,847	+				+0.2
2,661,847	+				-0.6
2,661,847	+				+4.5
2,661,848	-				+0.4
2,661,848	-				-0.6
2,661,848	-				+1.3
2,661,848	-				+1.8
2,661,848	-				+0.3
2,661,848	-				+0.2
2,661,848	-				+1.4
2,661,848	-				-0.0
2,661,848	-				-1.4
2,661,848	-				+0.0
2,661,848	-				+2.0
2,661,848	-				-1.6
2,661,848	-				-0.4
2,661,850	+				+1.1
2,661,850	+				+0.7
2,661,850	+				-0.5
2,661,851	-				-0.3
2,661,851	-				+1.3
2,661,851	-				+0.1
2,661,869	-				+0.0
2,661,898	+				+1.5
2,661,898	+				-0.9
2,661,899	-				+0.5
2,661,899	-				+0.4
2,661,972	-				+0.1
2,661,972	-				+0.2
2,661,972	-				+0.3
2,662,005	-				-0.9
2,662,047	+				-0.3
2,662,047	+				+1.2
2,662,048	-				-1.4
2,662,048	-				+0.7
2,662,048	-				+1.0
2,662,153	+				+2.0
2,662,154	-				-0.0
2,662,154	-				+1.0
2,662,193	+				-1.0
2,662,194	-				+1.3
2,662,505	+		AO353_12115	0.28	+0.5
2,662,505	+		AO353_12115	0.28	-1.3
2,662,505	+		AO353_12115	0.28	-0.5
2,662,599	-		AO353_12115	0.35	-0.0
2,662,599	-		AO353_12115	0.35	-0.0
2,662,715	+		AO353_12115	0.42	-0.5
2,662,988	+		AO353_12115	0.60	+1.0
2,663,159	+		AO353_12115	0.71	-0.8
2,663,159	+		AO353_12115	0.71	+0.5
2,663,565	+				+0.5
2,663,592	+				-0.0
2,663,615	+				+0.2
2,663,616	-				+0.1
2,663,616	-				+0.5
2,663,616	-				-0.5
2,663,616	-				-0.3
2,663,616	-				-0.0
2,663,616	-				+0.4
2,663,621	-				+0.4
2,663,621	-				-0.3
2,663,621	-				-0.9
2,663,652	+				-0.0
2,663,653	-				+0.2
2,663,701	+				-1.0
2,663,701	+				+0.7
2,663,702	-				-0.3
2,663,702	-				-0.2
2,663,712	+				-0.0
2,663,712	+				-0.0
2,663,712	+				-0.4
2,663,712	+				-0.9
2,663,712	+				+0.2
2,663,712	+				-0.5
2,663,712	+				+1.0
2,663,712	+				-0.2
2,663,712	+				+0.8
2,663,712	+				-0.6
2,663,713	-				+0.4
2,663,713	-				+1.5
2,663,713	-				+2.0
2,663,714	+				+1.0
2,663,714	+				+1.0
2,663,714	+				-0.4
2,663,729	+				-0.9
2,663,729	+				-0.0
2,663,779	+				+1.5
2,663,779	+				-0.9
2,663,786	+				+1.1
2,663,787	-				-0.8
2,663,812	-		AO353_12120	0.15	+2.0
2,664,098	-		AO353_12120	0.84	+1.5
2,664,098	-		AO353_12120	0.84	+0.5
2,664,165	-				-0.3
2,664,165	-				+0.5
2,664,165	-				+2.0
2,664,165	-				-0.6
2,664,183	+				-0.8
2,664,183	+				+1.5
2,664,184	-				-1.2
2,664,196	-		AO353_12125	0.12	-0.7
2,664,205	-		AO353_12125	0.16	+0.5
2,664,222	+		AO353_12125	0.22	+2.1
2,664,222	+		AO353_12125	0.22	+0.7
2,664,222	+		AO353_12125	0.22	+2.5
2,664,222	+		AO353_12125	0.22	-1.1
2,664,222	+		AO353_12125	0.22	-0.3
2,664,222	+		AO353_12125	0.22	-0.2
2,664,223	-		AO353_12125	0.23	-1.7
2,664,223	-		AO353_12125	0.23	+1.1
2,664,223	-		AO353_12125	0.23	+1.0
2,664,223	-		AO353_12125	0.23	-0.5
2,664,223	-		AO353_12125	0.23	+0.7
2,664,244	+		AO353_12125	0.31	-1.6
2,664,314	+		AO353_12125	0.58	+1.2
2,664,314	+		AO353_12125	0.58	+2.1
2,664,314	+		AO353_12125	0.58	+0.4
2,664,314	+		AO353_12125	0.58	+1.0
2,664,314	+		AO353_12125	0.58	-0.8
2,664,314	+		AO353_12125	0.58	-0.9
2,664,314	+		AO353_12125	0.58	+0.6
2,664,314	+		AO353_12125	0.58	+0.4
2,664,314	+		AO353_12125	0.58	-0.3
2,664,315	-		AO353_12125	0.59	-0.9
2,664,315	-		AO353_12125	0.59	+1.2
2,664,315	-		AO353_12125	0.59	-0.5
2,664,315	-		AO353_12125	0.59	+0.5
2,664,315	-		AO353_12125	0.59	+0.2
2,664,315	-		AO353_12125	0.59	-0.8
2,664,315	-		AO353_12125	0.59	+1.0
2,664,315	-		AO353_12125	0.59	+0.7
2,664,315	-		AO353_12125	0.59	-0.2
2,664,315	-		AO353_12125	0.59	+2.2
2,664,315	-		AO353_12125	0.59	-1.5
2,664,315	-		AO353_12125	0.59	+1.0
2,664,315	-		AO353_12125	0.59	-0.5
2,664,429	+				-0.5
2,664,429	+				+1.2
2,664,429	+				-1.5
2,664,429	+				-0.5
2,664,429	+				+0.0
2,664,445	+				-1.8
2,664,445	+				-0.9
2,664,445	+				+0.5
2,664,446	-				+0.1
2,664,446	-				+0.1
2,664,446	-				-2.6
2,664,446	-				+1.1
2,664,503	-				-1.0
2,664,545	+		AO353_12130	0.14	-0.4
2,664,545	+		AO353_12130	0.14	+0.4
2,664,545	+		AO353_12130	0.14	+0.5
2,664,545	+		AO353_12130	0.14	+0.5
2,664,545	+		AO353_12130	0.14	+0.7
2,664,546	-		AO353_12130	0.14	-0.9
2,664,546	-		AO353_12130	0.14	+0.2