Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_12035

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
2,646,532	+				+1.4
2,646,533	-				-0.8
2,646,533	-				-0.1
2,646,533	-				+0.3
2,646,533	-				-1.3
2,646,541	+				+0.6
2,646,541	+				-2.1
2,646,541	+				+2.3
2,646,541	+				+1.2
2,646,541	+				-0.4
2,646,542	-				-0.5
2,646,542	-				-0.4
2,646,542	-				-0.7
2,646,542	-				-0.6
2,646,551	+				-0.1
2,646,551	+				+0.6
2,646,552	-				+1.1
2,646,565	+				-1.0
2,646,566	-				-0.1
2,646,588	+				-0.4
2,646,645	-				-0.1
2,646,645	-				+1.1
2,646,683	+				-0.0
2,646,684	-		AO353_12030	0.10	-0.1
2,646,684	-		AO353_12030	0.10	+0.2
2,646,684	-		AO353_12030	0.10	+1.4
2,646,895	+		AO353_12030	0.62	-0.0
2,646,896	-		AO353_12030	0.62	-0.3
2,646,916	+		AO353_12030	0.67	+0.8
2,646,916	+		AO353_12030	0.67	-0.4
2,646,916	+		AO353_12030	0.67	-0.0
2,646,916	+		AO353_12030	0.67	-1.8
2,646,917	-		AO353_12030	0.68	-1.8
2,646,917	-		AO353_12030	0.68	+1.2
2,647,061	+				-1.1
2,647,061	+				-1.0
2,647,061	+				+1.3
2,647,061	+				+0.8
2,647,061	+				-0.7
2,647,061	+				-0.6
2,647,061	+				+0.6
2,647,061	+				+1.2
2,647,062	-				-1.4
2,647,062	-				+0.8
2,647,086	+				+0.0
2,647,086	+				-0.5
2,647,086	+				-0.0
2,647,087	-				-1.3
2,647,087	-				-0.3
2,647,212	+				-1.6
2,647,212	+				-1.5
2,647,213	-				+0.2
2,647,213	-				+1.0
2,647,239	+				+1.0
2,647,239	+				+0.2
2,647,239	+				+0.1
2,647,240	-				-0.9
2,647,247	+				+1.1
2,647,247	+				-1.3
2,647,247	+				-0.4
2,647,247	+				+0.7
2,647,247	+				-1.0
2,647,247	+				+0.2
2,647,247	+				+0.4
2,647,247	+				-0.6
2,647,247	+				+0.3
2,647,248	-				-0.1
2,647,248	-				-1.4
2,647,248	-				+1.6
2,647,248	-				+1.0
2,647,248	-				-1.0
2,647,254	+				+2.6
2,647,254	+				-1.4
2,647,254	+				-0.6
2,647,254	+				+0.7
2,647,255	-				-1.5
2,647,255	-				+0.6
2,647,255	-				-1.7
2,647,255	-				+0.4
2,647,316	+				+1.0
2,647,316	+				-1.5
2,647,316	+				-0.6
2,647,316	+				-0.4
2,647,316	+				-1.7
2,647,317	-				+0.2
2,647,317	-				+1.7
2,647,317	-				+0.1
2,647,317	-				-0.6
2,647,317	-				+1.2
2,647,445	-		AO353_12035	0.14	-0.1
2,647,445	-		AO353_12035	0.14	-1.1
2,647,445	-		AO353_12035	0.14	+0.6
2,647,497	+		AO353_12035	0.25	+0.6
2,647,497	+		AO353_12035	0.25	-0.1
2,647,498	-		AO353_12035	0.25	+2.0
2,647,498	-		AO353_12035	0.25	-0.1
2,647,589	+		AO353_12035	0.45	-1.7
2,647,589	+		AO353_12035	0.45	-0.5
2,647,589	+		AO353_12035	0.45	-0.3
2,647,589	+		AO353_12035	0.45	+0.1
2,647,589	+		AO353_12035	0.45	-1.6
2,647,589	+		AO353_12035	0.45	-0.6
2,647,589	+		AO353_12035	0.45	-0.0
2,647,589	+		AO353_12035	0.45	+1.2
2,647,590	-		AO353_12035	0.45	+0.5
2,647,590	-		AO353_12035	0.45	+1.6
2,647,590	-		AO353_12035	0.45	-0.3
2,647,590	-		AO353_12035	0.45	+0.6
2,647,590	-		AO353_12035	0.45	+1.7
2,647,590	-		AO353_12035	0.45	-1.0
2,647,590	-		AO353_12035	0.45	+1.6
2,647,591	+		AO353_12035	0.46	+1.4
2,647,591	+		AO353_12035	0.46	+0.7
2,647,592	-		AO353_12035	0.46	-0.7
2,647,631	+		AO353_12035	0.54	+0.7
2,647,631	+		AO353_12035	0.54	+0.2
2,647,631	+		AO353_12035	0.54	-0.1
2,647,631	+		AO353_12035	0.54	-0.0
2,647,631	+		AO353_12035	0.54	+0.4
2,647,631	+		AO353_12035	0.54	+1.2
2,647,631	+		AO353_12035	0.54	+0.6
2,647,732	+		AO353_12035	0.76	-0.8
2,647,732	+		AO353_12035	0.76	+0.1
2,647,732	+		AO353_12035	0.76	+0.8
2,647,732	+		AO353_12035	0.76	+0.1
2,647,732	+		AO353_12035	0.76	+1.1
2,647,732	+		AO353_12035	0.76	-0.4
2,647,732	+		AO353_12035	0.76	-1.4
2,647,733	-		AO353_12035	0.76	+1.4
2,647,733	-		AO353_12035	0.76	-0.5
2,647,733	-		AO353_12035	0.76	-0.9
2,647,733	-		AO353_12035	0.76	-0.5
2,647,733	-		AO353_12035	0.76	+0.7
2,647,733	-		AO353_12035	0.76	-1.5
2,647,733	-		AO353_12035	0.76	+0.2
2,647,736	+		AO353_12035	0.77	+0.4
2,647,736	+		AO353_12035	0.77	+1.2
2,647,736	+		AO353_12035	0.77	-1.3
2,647,736	+		AO353_12035	0.77	-1.0
2,647,736	+		AO353_12035	0.77	+0.3
2,647,736	+		AO353_12035	0.77	+2.0
2,647,736	+		AO353_12035	0.77	+0.5
2,647,736	+		AO353_12035	0.77	-0.6
2,647,736	+		AO353_12035	0.77	-0.3
2,647,736	+		AO353_12035	0.77	+0.2
2,647,736	+		AO353_12035	0.77	-0.0
2,647,736	+		AO353_12035	0.77	-0.8
2,647,736	+		AO353_12035	0.77	-0.3
2,647,736	+		AO353_12035	0.77	+0.8
2,647,736	+		AO353_12035	0.77	+0.6
2,647,736	+		AO353_12035	0.77	+0.8
2,647,736	+		AO353_12035	0.77	+0.8
2,647,736	+		AO353_12035	0.77	+1.6
2,647,737	-		AO353_12035	0.77	+0.3
2,647,737	-		AO353_12035	0.77	+1.0
2,647,737	-		AO353_12035	0.77	+1.6
2,647,737	-		AO353_12035	0.77	+0.2
2,647,737	-		AO353_12035	0.77	-0.8
2,647,737	-		AO353_12035	0.77	-0.2
2,647,737	-		AO353_12035	0.77	+0.2
2,647,737	-		AO353_12035	0.77	+0.6
2,647,737	-		AO353_12035	0.77	-0.7
2,647,756	+		AO353_12035	0.81	+0.7
2,647,756	+		AO353_12035	0.81	-0.0
2,647,756	+		AO353_12035	0.81	+0.7
2,647,770	+		AO353_12035	0.85	+0.4
2,647,771	-		AO353_12035	0.85	+0.9
2,647,771	-		AO353_12035	0.85	-0.4
2,647,771	-		AO353_12035	0.85	+0.2
2,647,771	-		AO353_12035	0.85	-0.4
2,647,771	-		AO353_12035	0.85	-0.0
2,647,807	+				-0.6
2,648,086	-				-0.4
2,648,148	+				+0.6
2,648,148	+				-0.0
2,648,149	-				-0.6
2,648,149	-				+0.6
2,648,166	+		AO353_12045	0.14	-0.6
2,648,166	+		AO353_12045	0.14	+0.6
2,648,167	-		AO353_12045	0.14	-0.3
2,648,184	+		AO353_12045	0.20	-1.1
2,648,184	+		AO353_12045	0.20	+0.7
2,648,184	+		AO353_12045	0.20	+0.1
2,648,184	+		AO353_12045	0.20	+1.8
2,648,184	+		AO353_12045	0.20	-0.8
2,648,184	+		AO353_12045	0.20	+0.2
2,648,185	-		AO353_12045	0.21	-0.0
2,648,185	-		AO353_12045	0.21	-0.8
2,648,185	-		AO353_12045	0.21	-0.8
2,648,185	-		AO353_12045	0.21	-0.3
2,648,185	-		AO353_12045	0.21	+0.6
2,648,208	+		AO353_12045	0.29	+1.6
2,648,209	-		AO353_12045	0.29	+0.2
2,648,209	-		AO353_12045	0.29	-0.4
2,648,209	-		AO353_12045	0.29	+0.2
2,648,209	-		AO353_12045	0.29	-1.4
2,648,209	-		AO353_12045	0.29	+1.0
2,648,373	+		AO353_12045	0.89	-0.3
2,648,373	+				+1.0
2,648,374	-				+0.6
2,648,422	+				-0.4
2,648,422	+				+3.6
2,648,422	+				+1.2
2,648,422	+				-1.1
2,648,422	+				-0.4
2,648,423	-				+0.7
2,648,423	-				-0.1
2,648,423	-				-0.3
2,648,423	-				+0.7
2,648,423	-				-1.4
2,648,423	-				+0.6
2,648,493	+				+0.6
2,648,493	+				+0.2
2,648,493	+				+0.6
2,648,493	+				+1.1
2,648,493	+				+0.7
2,648,494	-				+0.7
2,648,495	+				-3.0
2,648,495	+				+0.6
2,648,496	-				+0.8
2,648,496	-				+0.7
2,648,496	-				+2.0
2,648,496	-				+1.0
2,648,496	-				+2.2
2,648,496	-				-0.0
2,648,724	-		AO353_12050	0.31	+1.8
2,648,790	+		AO353_12050	0.37	+1.0