Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11760

Experiment: L-Aspartic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_11755 and AO353_11760 overlap by 4 nucleotidesAO353_11760 and AO353_11765 are separated by 219 nucleotidesAO353_11765 and AO353_11770 are separated by 331 nucleotides AO353_11755: AO353_11755 - ribosomal protein S6 modification protein, at 2,595,984 to 2,596,889 _11755 AO353_11760: AO353_11760 - ribosomal protein S6 modification protein, at 2,596,886 to 2,597,368 _11760 AO353_11765: AO353_11765 - RNA-binding protein, at 2,597,588 to 2,597,995 _11765 AO353_11770: AO353_11770 - molecular chaperone Hsp33, at 2,598,327 to 2,599,229 _11770 Position (kb) 2596 2597 2598Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2596.146 kb on - strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.354 kb on + strand, within AO353_11755at 2596.355 kb on - strand, within AO353_11755at 2596.355 kb on - strand, within AO353_11755at 2596.355 kb on - strand, within AO353_11755at 2596.355 kb on - strand, within AO353_11755at 2596.355 kb on - strand, within AO353_11755at 2596.355 kb on - strand, within AO353_11755at 2596.355 kb on - strand, within AO353_11755at 2596.757 kb on + strand, within AO353_11755at 2596.757 kb on + strand, within AO353_11755at 2596.757 kb on + strand, within AO353_11755at 2596.757 kb on + strand, within AO353_11755at 2596.757 kb on + strand, within AO353_11755at 2596.758 kb on - strand, within AO353_11755at 2596.775 kb on + strand, within AO353_11755at 2596.775 kb on + strand, within AO353_11755at 2596.775 kb on + strand, within AO353_11755at 2596.775 kb on + strand, within AO353_11755at 2596.775 kb on + strand, within AO353_11755at 2596.775 kb on + strand, within AO353_11755at 2596.776 kb on - strand, within AO353_11755at 2596.776 kb on - strand, within AO353_11755at 2596.776 kb on - strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.777 kb on + strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.778 kb on - strand, within AO353_11755at 2596.853 kb on - strandat 2596.909 kb on + strandat 2596.909 kb on + strandat 2596.910 kb on - strandat 2596.944 kb on + strand, within AO353_11760at 2596.944 kb on + strand, within AO353_11760at 2596.944 kb on + strand, within AO353_11760at 2596.944 kb on + strand, within AO353_11760at 2596.944 kb on + strand, within AO353_11760at 2596.945 kb on - strand, within AO353_11760at 2596.945 kb on - strand, within AO353_11760at 2596.945 kb on - strand, within AO353_11760at 2596.945 kb on - strand, within AO353_11760at 2596.945 kb on - strand, within AO353_11760at 2596.945 kb on - strand, within AO353_11760at 2596.948 kb on + strand, within AO353_11760at 2596.948 kb on + strand, within AO353_11760at 2596.948 kb on + strand, within AO353_11760at 2596.949 kb on - strand, within AO353_11760at 2596.949 kb on - strand, within AO353_11760at 2596.949 kb on - strand, within AO353_11760at 2596.949 kb on - strand, within AO353_11760at 2596.949 kb on - strand, within AO353_11760at 2597.080 kb on + strand, within AO353_11760at 2597.080 kb on + strand, within AO353_11760at 2597.080 kb on + strand, within AO353_11760at 2597.122 kb on + strand, within AO353_11760at 2597.122 kb on + strand, within AO353_11760at 2597.122 kb on + strand, within AO353_11760at 2597.122 kb on + strand, within AO353_11760at 2597.123 kb on - strand, within AO353_11760at 2597.123 kb on - strand, within AO353_11760at 2597.123 kb on - strand, within AO353_11760at 2597.123 kb on - strand, within AO353_11760at 2597.123 kb on - strand, within AO353_11760at 2597.423 kb on - strandat 2597.435 kb on + strandat 2597.436 kb on - strandat 2597.436 kb on - strandat 2597.442 kb on + strandat 2597.442 kb on + strandat 2597.443 kb on - strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.456 kb on + strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.457 kb on - strandat 2597.460 kb on + strandat 2597.460 kb on + strandat 2597.460 kb on + strandat 2597.460 kb on + strandat 2597.460 kb on + strandat 2597.461 kb on - strandat 2597.461 kb on - strandat 2597.461 kb on - strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.511 kb on + strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.512 kb on - strandat 2597.550 kb on + strandat 2597.550 kb on + strandat 2597.550 kb on + strandat 2597.551 kb on - strandat 2597.551 kb on - strandat 2597.553 kb on + strandat 2597.553 kb on + strandat 2597.553 kb on + strandat 2597.553 kb on + strandat 2597.554 kb on - strandat 2597.554 kb on - strandat 2597.554 kb on - strandat 2597.554 kb on - strandat 2597.554 kb on - strandat 2597.554 kb on - strandat 2597.554 kb on - strandat 2597.554 kb on - strandat 2597.566 kb on + strandat 2597.629 kb on + strand, within AO353_11765at 2597.630 kb on - strand, within AO353_11765at 2597.654 kb on + strand, within AO353_11765at 2597.654 kb on + strand, within AO353_11765at 2597.654 kb on + strand, within AO353_11765at 2597.655 kb on - strand, within AO353_11765at 2597.655 kb on - strand, within AO353_11765at 2597.655 kb on - strand, within AO353_11765at 2597.655 kb on - strand, within AO353_11765at 2597.655 kb on - strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.846 kb on + strand, within AO353_11765at 2597.847 kb on - strand, within AO353_11765at 2597.847 kb on - strand, within AO353_11765at 2597.847 kb on - strand, within AO353_11765at 2597.847 kb on - strand, within AO353_11765at 2597.847 kb on - strand, within AO353_11765at 2597.847 kb on - strand, within AO353_11765at 2597.847 kb on - strand, within AO353_11765at 2597.994 kb on - strandat 2598.079 kb on + strandat 2598.079 kb on + strandat 2598.079 kb on + strandat 2598.079 kb on + strandat 2598.080 kb on - strandat 2598.080 kb on - strandat 2598.080 kb on - strandat 2598.080 kb on - strandat 2598.164 kb on - strandat 2598.164 kb on - strandat 2598.168 kb on + strandat 2598.169 kb on - strandat 2598.181 kb on + strandat 2598.181 kb on + strandat 2598.182 kb on - strandat 2598.182 kb on - strandat 2598.225 kb on + strandat 2598.225 kb on + strandat 2598.225 kb on + strandat 2598.226 kb on - strandat 2598.246 kb on + strandat 2598.249 kb on + strandat 2598.249 kb on + strandat 2598.250 kb on - strandat 2598.250 kb on - strandat 2598.250 kb on - strandat 2598.250 kb on - strandat 2598.300 kb on + strandat 2598.300 kb on + strandat 2598.300 kb on + strandat 2598.300 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.326 kb on + strandat 2598.327 kb on - strandat 2598.327 kb on - strandat 2598.327 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
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2,596,146 - AO353_11755 0.18 -0.4
2,596,354 + AO353_11755 0.41 +0.1
2,596,354 + AO353_11755 0.41 +2.1
2,596,354 + AO353_11755 0.41 +0.0
2,596,354 + AO353_11755 0.41 +0.3
2,596,354 + AO353_11755 0.41 +0.4
2,596,354 + AO353_11755 0.41 +1.6
2,596,354 + AO353_11755 0.41 -0.3
2,596,354 + AO353_11755 0.41 -1.0
2,596,354 + AO353_11755 0.41 +0.1
2,596,354 + AO353_11755 0.41 +1.1
2,596,354 + AO353_11755 0.41 -0.8
2,596,355 - AO353_11755 0.41 -0.2
2,596,355 - AO353_11755 0.41 -0.5
2,596,355 - AO353_11755 0.41 -1.7
2,596,355 - AO353_11755 0.41 +0.2
2,596,355 - AO353_11755 0.41 +0.2
2,596,355 - AO353_11755 0.41 -0.2
2,596,355 - AO353_11755 0.41 +0.2
2,596,757 + AO353_11755 0.85 +0.2
2,596,757 + AO353_11755 0.85 -0.5
2,596,757 + AO353_11755 0.85 +2.6
2,596,757 + AO353_11755 0.85 -0.9
2,596,757 + AO353_11755 0.85 -0.5
2,596,758 - AO353_11755 0.85 -0.0
2,596,775 + AO353_11755 0.87 -0.4
2,596,775 + AO353_11755 0.87 +1.1
2,596,775 + AO353_11755 0.87 +0.6
2,596,775 + AO353_11755 0.87 -0.8
2,596,775 + AO353_11755 0.87 +0.1
2,596,775 + AO353_11755 0.87 +0.8
2,596,776 - AO353_11755 0.87 -1.1
2,596,776 - AO353_11755 0.87 -0.9
2,596,776 - AO353_11755 0.87 +0.1
2,596,777 + AO353_11755 0.88 -1.5
2,596,777 + AO353_11755 0.88 -0.3
2,596,777 + AO353_11755 0.88 +0.6
2,596,777 + AO353_11755 0.88 -0.2
2,596,777 + AO353_11755 0.88 -0.0
2,596,777 + AO353_11755 0.88 -1.0
2,596,777 + AO353_11755 0.88 +0.4
2,596,777 + AO353_11755 0.88 -2.0
2,596,777 + AO353_11755 0.88 -0.8
2,596,777 + AO353_11755 0.88 +0.6
2,596,777 + AO353_11755 0.88 -0.8
2,596,777 + AO353_11755 0.88 -1.5
2,596,777 + AO353_11755 0.88 +0.0
2,596,777 + AO353_11755 0.88 -1.1
2,596,777 + AO353_11755 0.88 -0.8
2,596,777 + AO353_11755 0.88 +0.7
2,596,777 + AO353_11755 0.88 +0.1
2,596,777 + AO353_11755 0.88 -0.4
2,596,778 - AO353_11755 0.88 +2.0
2,596,778 - AO353_11755 0.88 +0.8
2,596,778 - AO353_11755 0.88 -1.1
2,596,778 - AO353_11755 0.88 -0.5
2,596,778 - AO353_11755 0.88 +0.6
2,596,778 - AO353_11755 0.88 +0.9
2,596,778 - AO353_11755 0.88 +1.7
2,596,778 - AO353_11755 0.88 +0.2
2,596,778 - AO353_11755 0.88 -1.4
2,596,778 - AO353_11755 0.88 -0.0
2,596,853 - +0.4
2,596,909 + +0.4
2,596,909 + -0.3
2,596,910 - -1.2
2,596,944 + AO353_11760 0.12 -0.6
2,596,944 + AO353_11760 0.12 -0.7
2,596,944 + AO353_11760 0.12 -0.4
2,596,944 + AO353_11760 0.12 -1.5
2,596,944 + AO353_11760 0.12 +0.2
2,596,945 - AO353_11760 0.12 +0.2
2,596,945 - AO353_11760 0.12 +3.6
2,596,945 - AO353_11760 0.12 +0.4
2,596,945 - AO353_11760 0.12 -0.1
2,596,945 - AO353_11760 0.12 +1.2
2,596,945 - AO353_11760 0.12 -0.6
2,596,948 + AO353_11760 0.13 +1.1
2,596,948 + AO353_11760 0.13 +0.2
2,596,948 + AO353_11760 0.13 +3.0
2,596,949 - AO353_11760 0.13 +0.7
2,596,949 - AO353_11760 0.13 +0.2
2,596,949 - AO353_11760 0.13 +0.8
2,596,949 - AO353_11760 0.13 +0.8
2,596,949 - AO353_11760 0.13 +0.5
2,597,080 + AO353_11760 0.40 -0.0
2,597,080 + AO353_11760 0.40 +0.2
2,597,080 + AO353_11760 0.40 -0.1
2,597,122 + AO353_11760 0.49 +2.3
2,597,122 + AO353_11760 0.49 +2.2
2,597,122 + AO353_11760 0.49 +0.5
2,597,122 + AO353_11760 0.49 +0.1
2,597,123 - AO353_11760 0.49 -1.4
2,597,123 - AO353_11760 0.49 -0.5
2,597,123 - AO353_11760 0.49 -1.6
2,597,123 - AO353_11760 0.49 -0.0
2,597,123 - AO353_11760 0.49 +0.6
2,597,423 - +0.6
2,597,435 + -1.2
2,597,436 - +0.1
2,597,436 - -0.4
2,597,442 + -0.2
2,597,442 + -0.2
2,597,443 - -2.1
2,597,456 + -0.6
2,597,456 + -0.2
2,597,456 + -0.3
2,597,456 + +0.4
2,597,456 + -0.2
2,597,456 + +0.6
2,597,456 + +0.2
2,597,456 + -0.9
2,597,456 + -0.0
2,597,456 + +0.3
2,597,456 + +0.9
2,597,456 + +0.1
2,597,457 - -1.4
2,597,457 - -0.2
2,597,457 - -0.0
2,597,457 - +0.2
2,597,457 - -1.0
2,597,457 - +0.1
2,597,457 - +0.2
2,597,457 - -0.4
2,597,457 - +1.2
2,597,457 - -0.3
2,597,457 - -1.2
2,597,457 - -0.9
2,597,460 + -0.7
2,597,460 + +0.5
2,597,460 + +0.4
2,597,460 + +0.2
2,597,460 + -0.0
2,597,461 - -0.0
2,597,461 - -0.4
2,597,461 - -1.6
2,597,511 + -1.0
2,597,511 + +1.0
2,597,511 + -0.4
2,597,511 + +0.5
2,597,511 + -0.3
2,597,511 + -1.0
2,597,511 + -0.4
2,597,511 + +0.1
2,597,511 + -1.1
2,597,511 + -0.2
2,597,511 + +0.4
2,597,511 + +0.2
2,597,511 + +1.0
2,597,511 + -0.2
2,597,511 + +0.4
2,597,511 + +1.6
2,597,511 + -1.6
2,597,511 + -0.9
2,597,511 + +1.0
2,597,511 + +1.0
2,597,511 + +0.7
2,597,512 - +0.8
2,597,512 - -0.6
2,597,512 - +1.8
2,597,512 - -0.8
2,597,512 - -1.6
2,597,512 - +0.3
2,597,512 - -1.1
2,597,512 - +0.6
2,597,512 - -0.2
2,597,512 - -0.4
2,597,512 - -1.2
2,597,512 - +1.4
2,597,512 - -1.6
2,597,512 - +0.2
2,597,512 - +1.6
2,597,512 - +2.6
2,597,512 - -0.9
2,597,512 - +0.8
2,597,512 - -0.1
2,597,550 + -0.0
2,597,550 + -0.1
2,597,550 + -1.1
2,597,551 - -0.4
2,597,551 - +1.6
2,597,553 + -0.0
2,597,553 + +1.3
2,597,553 + -0.1
2,597,553 + +0.8
2,597,554 - -0.2
2,597,554 - +0.8
2,597,554 - -0.4
2,597,554 - +2.0
2,597,554 - +0.6
2,597,554 - -0.6
2,597,554 - -0.7
2,597,554 - +0.7
2,597,566 + +1.3
2,597,629 + AO353_11765 0.10 +0.9
2,597,630 - AO353_11765 0.10 -1.1
2,597,654 + AO353_11765 0.16 -0.7
2,597,654 + AO353_11765 0.16 +0.6
2,597,654 + AO353_11765 0.16 -0.9
2,597,655 - AO353_11765 0.16 +0.9
2,597,655 - AO353_11765 0.16 +1.2
2,597,655 - AO353_11765 0.16 +0.2
2,597,655 - AO353_11765 0.16 -0.9
2,597,655 - AO353_11765 0.16 -0.0
2,597,846 + AO353_11765 0.63 -1.2
2,597,846 + AO353_11765 0.63 -0.6
2,597,846 + AO353_11765 0.63 -1.5
2,597,846 + AO353_11765 0.63 -1.2
2,597,846 + AO353_11765 0.63 +0.0
2,597,846 + AO353_11765 0.63 +1.2
2,597,846 + AO353_11765 0.63 -0.8
2,597,846 + AO353_11765 0.63 -0.2
2,597,846 + AO353_11765 0.63 +0.6
2,597,846 + AO353_11765 0.63 +0.3
2,597,846 + AO353_11765 0.63 -0.0
2,597,846 + AO353_11765 0.63 +0.0
2,597,846 + AO353_11765 0.63 -1.2
2,597,846 + AO353_11765 0.63 -1.6
2,597,846 + AO353_11765 0.63 -0.6
2,597,847 - AO353_11765 0.63 -0.2
2,597,847 - AO353_11765 0.63 -2.3
2,597,847 - AO353_11765 0.63 -0.2
2,597,847 - AO353_11765 0.63 -0.3
2,597,847 - AO353_11765 0.63 -0.1
2,597,847 - AO353_11765 0.63 +0.8
2,597,847 - AO353_11765 0.63 +2.2
2,597,994 - +0.6
2,598,079 + +0.8
2,598,079 + -1.9
2,598,079 + -1.0
2,598,079 + +0.4
2,598,080 - -0.2
2,598,080 - -0.0
2,598,080 - +2.4
2,598,080 - -0.8
2,598,164 - -0.5
2,598,164 - -0.1
2,598,168 + -0.4
2,598,169 - -0.4
2,598,181 + +2.0
2,598,181 + -2.1
2,598,182 - -0.1
2,598,182 - +1.1
2,598,225 + -1.7
2,598,225 + -0.8
2,598,225 + -0.8
2,598,226 - +0.2
2,598,246 + -0.8
2,598,249 + +0.2
2,598,249 + -0.0
2,598,250 - -0.0
2,598,250 - +1.1
2,598,250 - -2.8
2,598,250 - -0.2
2,598,300 + -1.8
2,598,300 + -0.9
2,598,300 + -0.8
2,598,300 + -0.6
2,598,326 + -0.4
2,598,326 + +1.8
2,598,326 + -0.5
2,598,326 + -0.2
2,598,326 + -1.2
2,598,326 + +0.4
2,598,326 + -0.1
2,598,326 + -1.9
2,598,326 + +0.6
2,598,326 + +2.6
2,598,326 + +1.4
2,598,326 + -1.0
2,598,326 + +0.2
2,598,327 - -0.2
2,598,327 - +0.1
2,598,327 - -0.9

Or see this region's nucleotide sequence