Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10625 and AO353_10630 are separated by 23 nucleotides AO353_10630 and AO353_10635 overlap by 4 nucleotides
AO353_10625: AO353_10625 - potassium transporter peripheral membrane component, at 2,329,200 to 2,330,573
_10625
AO353_10630: AO353_10630 - 16S rRNA methyltransferase, at 2,330,597 to 2,331,907
_10630
AO353_10635: AO353_10635 - methionyl-tRNA formyltransferase, at 2,331,904 to 2,332,863
_10635
Position (kb)
2330
2331
2332 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2329.695 kb on - strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.771 kb on + strand, within AO353_10625 at 2329.771 kb on + strand, within AO353_10625 at 2329.814 kb on - strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.944 kb on - strand, within AO353_10625 at 2330.092 kb on + strand, within AO353_10625 at 2330.092 kb on + strand, within AO353_10625 at 2330.092 kb on + strand, within AO353_10625 at 2330.092 kb on + strand, within AO353_10625 at 2330.092 kb on + strand, within AO353_10625 at 2330.092 kb on + strand, within AO353_10625 at 2330.093 kb on - strand, within AO353_10625 at 2330.093 kb on - strand, within AO353_10625 at 2330.093 kb on - strand, within AO353_10625 at 2330.093 kb on - strand, within AO353_10625 at 2330.093 kb on - strand, within AO353_10625 at 2330.093 kb on - strand, within AO353_10625 at 2330.093 kb on - strand, within AO353_10625 at 2330.095 kb on + strand, within AO353_10625 at 2330.095 kb on + strand, within AO353_10625 at 2330.095 kb on + strand, within AO353_10625 at 2330.095 kb on + strand, within AO353_10625 at 2330.095 kb on + strand, within AO353_10625 at 2330.095 kb on + strand, within AO353_10625 at 2330.096 kb on - strand, within AO353_10625 at 2330.096 kb on - strand, within AO353_10625 at 2330.139 kb on + strand, within AO353_10625 at 2330.139 kb on + strand, within AO353_10625 at 2330.139 kb on + strand, within AO353_10625 at 2330.140 kb on - strand, within AO353_10625 at 2330.182 kb on + strand, within AO353_10625 at 2330.182 kb on + strand, within AO353_10625 at 2330.182 kb on + strand, within AO353_10625 at 2330.182 kb on + strand, within AO353_10625 at 2330.182 kb on + strand, within AO353_10625 at 2330.182 kb on + strand, within AO353_10625 at 2330.182 kb on + strand, within AO353_10625 at 2330.182 kb on + strand, within AO353_10625 at 2330.182 kb on + strand, within AO353_10625 at 2330.183 kb on - strand, within AO353_10625 at 2330.183 kb on - strand, within AO353_10625 at 2330.183 kb on - strand, within AO353_10625 at 2330.183 kb on - strand, within AO353_10625 at 2330.183 kb on - strand, within AO353_10625 at 2330.193 kb on + strand, within AO353_10625 at 2330.193 kb on + strand, within AO353_10625 at 2330.193 kb on + strand, within AO353_10625 at 2330.193 kb on + strand, within AO353_10625 at 2330.193 kb on + strand, within AO353_10625 at 2330.193 kb on + strand, within AO353_10625 at 2330.193 kb on + strand, within AO353_10625 at 2330.193 kb on + strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.194 kb on - strand, within AO353_10625 at 2330.264 kb on - strand, within AO353_10625 at 2330.264 kb on - strand, within AO353_10625 at 2330.535 kb on - strand at 2330.634 kb on + strand at 2330.634 kb on + strand at 2330.634 kb on + strand at 2330.635 kb on - strand at 2330.635 kb on - strand at 2330.637 kb on + strand at 2330.637 kb on + strand at 2330.637 kb on + strand at 2330.637 kb on + strand at 2330.637 kb on + strand at 2330.637 kb on + strand at 2330.637 kb on + strand at 2330.637 kb on + strand at 2330.637 kb on + strand at 2330.637 kb on + strand at 2330.638 kb on - strand at 2330.638 kb on - strand at 2330.638 kb on - strand at 2330.638 kb on - strand at 2330.638 kb on - strand at 2330.638 kb on - strand at 2330.799 kb on + strand, within AO353_10630 at 2331.354 kb on + strand, within AO353_10630 at 2331.354 kb on + strand, within AO353_10630 at 2331.354 kb on + strand, within AO353_10630 at 2331.354 kb on + strand, within AO353_10630 at 2331.354 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.651 kb on + strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.652 kb on - strand, within AO353_10630 at 2331.663 kb on + strand, within AO353_10630 at 2331.862 kb on + strand at 2331.928 kb on + strand at 2331.928 kb on + strand at 2331.928 kb on + strand at 2331.929 kb on - strand at 2331.929 kb on - strand at 2331.929 kb on - strand at 2331.929 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 2,329,695 - AO353_10625 0.36 +0.2 2,329,710 + AO353_10625 0.37 -0.4 2,329,710 + AO353_10625 0.37 +0.1 2,329,710 + AO353_10625 0.37 -1.2 2,329,710 + AO353_10625 0.37 -2.0 2,329,710 + AO353_10625 0.37 -0.5 2,329,710 + AO353_10625 0.37 -0.1 2,329,710 + AO353_10625 0.37 -1.2 2,329,710 + AO353_10625 0.37 -0.4 2,329,710 + AO353_10625 0.37 +1.3 2,329,710 + AO353_10625 0.37 +2.2 2,329,710 + AO353_10625 0.37 +1.7 2,329,711 - AO353_10625 0.37 -0.7 2,329,711 - AO353_10625 0.37 +1.7 2,329,711 - AO353_10625 0.37 -1.6 2,329,711 - AO353_10625 0.37 -0.9 2,329,711 - AO353_10625 0.37 +0.2 2,329,711 - AO353_10625 0.37 +1.3 2,329,771 + AO353_10625 0.42 +0.7 2,329,771 + AO353_10625 0.42 -0.7 2,329,814 - AO353_10625 0.45 +0.1 2,329,882 + AO353_10625 0.50 -1.5 2,329,882 + AO353_10625 0.50 -0.8 2,329,882 + AO353_10625 0.50 -1.0 2,329,882 + AO353_10625 0.50 -0.3 2,329,882 + AO353_10625 0.50 -0.3 2,329,882 + AO353_10625 0.50 +0.1 2,329,882 + AO353_10625 0.50 -0.7 2,329,882 + AO353_10625 0.50 +0.1 2,329,882 + AO353_10625 0.50 -0.5 2,329,882 + AO353_10625 0.50 -0.3 2,329,882 + AO353_10625 0.50 -1.0 2,329,882 + AO353_10625 0.50 +0.5 2,329,882 + AO353_10625 0.50 +0.1 2,329,883 - AO353_10625 0.50 -0.8 2,329,883 - AO353_10625 0.50 -2.6 2,329,883 - AO353_10625 0.50 +0.6 2,329,883 - AO353_10625 0.50 +1.3 2,329,883 - AO353_10625 0.50 -0.3 2,329,883 - AO353_10625 0.50 +2.7 2,329,944 - AO353_10625 0.54 +0.4 2,330,092 + AO353_10625 0.65 -0.8 2,330,092 + AO353_10625 0.65 -0.5 2,330,092 + AO353_10625 0.65 +0.3 2,330,092 + AO353_10625 0.65 +0.1 2,330,092 + AO353_10625 0.65 +0.1 2,330,092 + AO353_10625 0.65 -0.5 2,330,093 - AO353_10625 0.65 -0.1 2,330,093 - AO353_10625 0.65 -1.3 2,330,093 - AO353_10625 0.65 +0.7 2,330,093 - AO353_10625 0.65 -1.2 2,330,093 - AO353_10625 0.65 -0.1 2,330,093 - AO353_10625 0.65 -0.5 2,330,093 - AO353_10625 0.65 -0.8 2,330,095 + AO353_10625 0.65 +0.2 2,330,095 + AO353_10625 0.65 +2.2 2,330,095 + AO353_10625 0.65 -0.3 2,330,095 + AO353_10625 0.65 -1.0 2,330,095 + AO353_10625 0.65 -2.3 2,330,095 + AO353_10625 0.65 +0.1 2,330,096 - AO353_10625 0.65 +0.3 2,330,096 - AO353_10625 0.65 -0.4 2,330,139 + AO353_10625 0.68 +0.1 2,330,139 + AO353_10625 0.68 -0.5 2,330,139 + AO353_10625 0.68 -1.8 2,330,140 - AO353_10625 0.68 -0.1 2,330,182 + AO353_10625 0.71 -1.4 2,330,182 + AO353_10625 0.71 +0.9 2,330,182 + AO353_10625 0.71 +2.2 2,330,182 + AO353_10625 0.71 -0.4 2,330,182 + AO353_10625 0.71 -0.0 2,330,182 + AO353_10625 0.71 +0.4 2,330,182 + AO353_10625 0.71 -0.7 2,330,182 + AO353_10625 0.71 -0.7 2,330,182 + AO353_10625 0.71 +1.2 2,330,183 - AO353_10625 0.72 +0.9 2,330,183 - AO353_10625 0.72 -1.2 2,330,183 - AO353_10625 0.72 -1.3 2,330,183 - AO353_10625 0.72 -0.4 2,330,183 - AO353_10625 0.72 -1.9 2,330,193 + AO353_10625 0.72 +0.9 2,330,193 + AO353_10625 0.72 +0.8 2,330,193 + AO353_10625 0.72 +1.1 2,330,193 + AO353_10625 0.72 -0.9 2,330,193 + AO353_10625 0.72 -0.1 2,330,193 + AO353_10625 0.72 +1.3 2,330,193 + AO353_10625 0.72 +0.4 2,330,193 + AO353_10625 0.72 -1.4 2,330,194 - AO353_10625 0.72 -0.4 2,330,194 - AO353_10625 0.72 -0.9 2,330,194 - AO353_10625 0.72 +0.0 2,330,194 - AO353_10625 0.72 -1.0 2,330,194 - AO353_10625 0.72 -1.1 2,330,194 - AO353_10625 0.72 +0.1 2,330,194 - AO353_10625 0.72 +0.2 2,330,194 - AO353_10625 0.72 +0.7 2,330,194 - AO353_10625 0.72 -0.8 2,330,194 - AO353_10625 0.72 -1.3 2,330,194 - AO353_10625 0.72 +1.1 2,330,264 - AO353_10625 0.77 +0.7 2,330,264 - AO353_10625 0.77 +1.4 2,330,535 - -0.6 2,330,634 + -0.5 2,330,634 + -0.9 2,330,634 + +0.1 2,330,635 - -0.7 2,330,635 - -0.1 2,330,637 + +1.7 2,330,637 + +2.2 2,330,637 + -0.7 2,330,637 + -0.3 2,330,637 + +0.5 2,330,637 + +0.2 2,330,637 + -0.3 2,330,637 + -0.2 2,330,637 + +0.1 2,330,637 + +0.4 2,330,638 - -0.8 2,330,638 - +0.9 2,330,638 - +1.1 2,330,638 - +0.3 2,330,638 - -1.1 2,330,638 - -0.5 2,330,799 + AO353_10630 0.15 +1.2 2,331,354 + AO353_10630 0.58 +1.2 2,331,354 + AO353_10630 0.58 -1.1 2,331,354 + AO353_10630 0.58 +1.2 2,331,354 + AO353_10630 0.58 -0.3 2,331,354 + AO353_10630 0.58 +0.9 2,331,651 + AO353_10630 0.80 +1.4 2,331,651 + AO353_10630 0.80 -0.1 2,331,651 + AO353_10630 0.80 -0.8 2,331,651 + AO353_10630 0.80 +1.1 2,331,651 + AO353_10630 0.80 -1.5 2,331,651 + AO353_10630 0.80 -0.3 2,331,651 + AO353_10630 0.80 +1.4 2,331,651 + AO353_10630 0.80 +0.5 2,331,651 + AO353_10630 0.80 +0.4 2,331,651 + AO353_10630 0.80 +0.1 2,331,652 - AO353_10630 0.80 +0.8 2,331,652 - AO353_10630 0.80 -0.9 2,331,652 - AO353_10630 0.80 -1.2 2,331,652 - AO353_10630 0.80 -1.4 2,331,652 - AO353_10630 0.80 +0.7 2,331,652 - AO353_10630 0.80 -0.8 2,331,663 + AO353_10630 0.81 -0.0 2,331,862 + -2.5 2,331,928 + -0.0 2,331,928 + -1.5 2,331,928 + -0.2 2,331,929 - +0.3 2,331,929 - -0.1 2,331,929 - +1.3 2,331,929 - -0.5
Or see this region's nucleotide sequence