Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09870 and AO353_09875 are separated by 214 nucleotides AO353_09875 and AO353_09880 are separated by 367 nucleotides
AO353_09870: AO353_09870 - peptidase M23, at 2,154,731 to 2,155,627
_09870
AO353_09875: AO353_09875 - hypothetical protein, at 2,155,842 to 2,156,231
_09875
AO353_09880: AO353_09880 - chemotaxis protein CheY, at 2,156,599 to 2,157,549
_09880
Position (kb)
2155
2156
2157 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2154.945 kb on + strand, within AO353_09870 at 2154.945 kb on + strand, within AO353_09870 at 2154.945 kb on + strand, within AO353_09870 at 2154.945 kb on + strand, within AO353_09870 at 2154.945 kb on + strand, within AO353_09870 at 2154.945 kb on + strand, within AO353_09870 at 2154.945 kb on + strand, within AO353_09870 at 2154.946 kb on - strand, within AO353_09870 at 2154.946 kb on - strand, within AO353_09870 at 2154.946 kb on - strand, within AO353_09870 at 2154.946 kb on - strand, within AO353_09870 at 2155.123 kb on + strand, within AO353_09870 at 2155.123 kb on + strand, within AO353_09870 at 2155.123 kb on + strand, within AO353_09870 at 2155.124 kb on - strand, within AO353_09870 at 2155.124 kb on - strand, within AO353_09870 at 2155.124 kb on - strand, within AO353_09870 at 2155.124 kb on - strand, within AO353_09870 at 2155.124 kb on - strand, within AO353_09870 at 2155.124 kb on - strand, within AO353_09870 at 2155.124 kb on - strand, within AO353_09870 at 2155.125 kb on + strand, within AO353_09870 at 2155.201 kb on + strand, within AO353_09870 at 2155.201 kb on + strand, within AO353_09870 at 2155.201 kb on + strand, within AO353_09870 at 2155.202 kb on - strand, within AO353_09870 at 2155.202 kb on - strand, within AO353_09870 at 2155.224 kb on + strand, within AO353_09870 at 2155.225 kb on - strand, within AO353_09870 at 2155.225 kb on - strand, within AO353_09870 at 2155.225 kb on - strand, within AO353_09870 at 2155.225 kb on - strand, within AO353_09870 at 2155.225 kb on - strand, within AO353_09870 at 2155.225 kb on - strand, within AO353_09870 at 2155.240 kb on + strand, within AO353_09870 at 2155.241 kb on - strand, within AO353_09870 at 2155.242 kb on + strand, within AO353_09870 at 2155.242 kb on + strand, within AO353_09870 at 2155.242 kb on + strand, within AO353_09870 at 2155.243 kb on - strand, within AO353_09870 at 2155.243 kb on - strand, within AO353_09870 at 2155.243 kb on - strand, within AO353_09870 at 2155.265 kb on - strand, within AO353_09870 at 2155.265 kb on - strand, within AO353_09870 at 2155.389 kb on + strand, within AO353_09870 at 2155.389 kb on + strand, within AO353_09870 at 2155.390 kb on - strand, within AO353_09870 at 2155.390 kb on - strand, within AO353_09870 at 2155.390 kb on - strand, within AO353_09870 at 2155.448 kb on + strand, within AO353_09870 at 2155.448 kb on + strand, within AO353_09870 at 2155.448 kb on + strand, within AO353_09870 at 2155.448 kb on + strand, within AO353_09870 at 2155.449 kb on - strand, within AO353_09870 at 2155.449 kb on - strand, within AO353_09870 at 2155.449 kb on - strand, within AO353_09870 at 2155.449 kb on - strand, within AO353_09870 at 2155.524 kb on + strand, within AO353_09870 at 2155.524 kb on + strand, within AO353_09870 at 2155.524 kb on + strand, within AO353_09870 at 2155.525 kb on - strand, within AO353_09870 at 2155.525 kb on - strand, within AO353_09870 at 2155.525 kb on - strand, within AO353_09870 at 2155.525 kb on - strand, within AO353_09870 at 2155.525 kb on - strand, within AO353_09870 at 2155.555 kb on + strand at 2155.555 kb on + strand at 2155.555 kb on + strand at 2155.555 kb on + strand at 2155.555 kb on + strand at 2155.556 kb on - strand at 2155.556 kb on - strand at 2155.556 kb on - strand at 2155.557 kb on + strand at 2155.557 kb on + strand at 2155.557 kb on + strand at 2155.557 kb on + strand at 2155.557 kb on + strand at 2155.557 kb on + strand at 2155.558 kb on - strand at 2155.558 kb on - strand at 2155.558 kb on - strand at 2155.558 kb on - strand at 2155.558 kb on - strand at 2155.558 kb on - strand at 2155.558 kb on - strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.561 kb on + strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.562 kb on - strand at 2155.627 kb on + strand at 2155.627 kb on + strand at 2155.627 kb on + strand at 2155.627 kb on + strand at 2155.627 kb on + strand at 2155.627 kb on + strand at 2155.627 kb on + strand at 2155.627 kb on + strand at 2155.627 kb on + strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.628 kb on - strand at 2155.665 kb on - strand at 2155.665 kb on - strand at 2155.665 kb on - strand at 2155.686 kb on + strand at 2155.687 kb on - strand at 2155.843 kb on + strand at 2155.843 kb on + strand at 2155.843 kb on + strand at 2155.843 kb on + strand at 2155.843 kb on + strand at 2155.844 kb on - strand at 2155.844 kb on - strand at 2155.844 kb on - strand at 2155.844 kb on - strand at 2155.844 kb on - strand at 2155.844 kb on - strand at 2155.858 kb on + strand at 2155.859 kb on - strand at 2155.933 kb on + strand, within AO353_09875 at 2155.933 kb on + strand, within AO353_09875 at 2155.933 kb on + strand, within AO353_09875 at 2156.237 kb on + strand at 2156.237 kb on + strand at 2156.237 kb on + strand at 2156.237 kb on + strand at 2156.237 kb on + strand at 2156.237 kb on + strand at 2156.237 kb on + strand at 2156.237 kb on + strand at 2156.237 kb on + strand at 2156.252 kb on + strand at 2156.252 kb on + strand at 2156.252 kb on + strand at 2156.253 kb on - strand at 2156.253 kb on - strand at 2156.253 kb on - strand at 2156.253 kb on - strand at 2156.253 kb on - strand at 2156.253 kb on - strand at 2156.381 kb on + strand at 2156.381 kb on + strand at 2156.400 kb on + strand at 2156.400 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.408 kb on + strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.409 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.497 kb on - strand at 2156.513 kb on + strand at 2156.514 kb on - strand at 2156.514 kb on - strand at 2156.571 kb on + strand at 2156.572 kb on - strand at 2156.596 kb on + strand at 2156.596 kb on + strand at 2156.596 kb on + strand at 2156.596 kb on + strand at 2156.596 kb on + strand at 2156.596 kb on + strand at 2156.596 kb on + strand at 2156.596 kb on + strand at 2156.596 kb on + strand at 2156.597 kb on - strand at 2156.597 kb on - strand at 2156.600 kb on + strand at 2156.600 kb on + strand at 2156.600 kb on + strand at 2156.600 kb on + strand at 2156.600 kb on + strand at 2156.600 kb on + strand at 2156.600 kb on + strand at 2156.600 kb on + strand at 2156.601 kb on - strand at 2156.601 kb on - strand at 2156.612 kb on - strand at 2156.657 kb on + strand at 2156.657 kb on + strand at 2156.657 kb on + strand at 2156.657 kb on + strand at 2156.657 kb on + strand at 2156.657 kb on + strand at 2156.657 kb on + strand at 2156.657 kb on + strand at 2156.657 kb on + strand at 2156.657 kb on + strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.658 kb on - strand at 2156.753 kb on + strand, within AO353_09880 at 2156.753 kb on + strand, within AO353_09880 at 2156.753 kb on + strand, within AO353_09880 at 2156.898 kb on + strand, within AO353_09880 at 2156.898 kb on + strand, within AO353_09880 at 2156.899 kb on - strand, within AO353_09880 at 2156.899 kb on - strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.914 kb on + strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880 at 2156.915 kb on - strand, within AO353_09880
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 2,154,945 + AO353_09870 0.24 -1.2 2,154,945 + AO353_09870 0.24 -1.2 2,154,945 + AO353_09870 0.24 -1.0 2,154,945 + AO353_09870 0.24 -0.8 2,154,945 + AO353_09870 0.24 -0.9 2,154,945 + AO353_09870 0.24 -0.5 2,154,945 + AO353_09870 0.24 -1.5 2,154,946 - AO353_09870 0.24 +0.7 2,154,946 - AO353_09870 0.24 -1.7 2,154,946 - AO353_09870 0.24 +0.1 2,154,946 - AO353_09870 0.24 +0.4 2,155,123 + AO353_09870 0.44 -1.5 2,155,123 + AO353_09870 0.44 +0.7 2,155,123 + AO353_09870 0.44 -0.7 2,155,124 - AO353_09870 0.44 +0.8 2,155,124 - AO353_09870 0.44 -0.8 2,155,124 - AO353_09870 0.44 +0.2 2,155,124 - AO353_09870 0.44 +1.1 2,155,124 - AO353_09870 0.44 -0.4 2,155,124 - AO353_09870 0.44 +0.3 2,155,124 - AO353_09870 0.44 -1.0 2,155,125 + AO353_09870 0.44 +0.9 2,155,201 + AO353_09870 0.52 +1.8 2,155,201 + AO353_09870 0.52 -0.5 2,155,201 + AO353_09870 0.52 -0.5 2,155,202 - AO353_09870 0.53 +1.7 2,155,202 - AO353_09870 0.53 -1.2 2,155,224 + AO353_09870 0.55 +0.3 2,155,225 - AO353_09870 0.55 -0.3 2,155,225 - AO353_09870 0.55 -1.5 2,155,225 - AO353_09870 0.55 -1.3 2,155,225 - AO353_09870 0.55 -1.7 2,155,225 - AO353_09870 0.55 -0.5 2,155,225 - AO353_09870 0.55 -0.2 2,155,240 + AO353_09870 0.57 +1.3 2,155,241 - AO353_09870 0.57 +0.6 2,155,242 + AO353_09870 0.57 +0.3 2,155,242 + AO353_09870 0.57 -0.6 2,155,242 + AO353_09870 0.57 -1.2 2,155,243 - AO353_09870 0.57 -1.3 2,155,243 - AO353_09870 0.57 +1.3 2,155,243 - AO353_09870 0.57 +0.9 2,155,265 - AO353_09870 0.60 +0.3 2,155,265 - AO353_09870 0.60 +0.9 2,155,389 + AO353_09870 0.73 +1.7 2,155,389 + AO353_09870 0.73 +1.1 2,155,390 - AO353_09870 0.73 -0.3 2,155,390 - AO353_09870 0.73 -0.3 2,155,390 - AO353_09870 0.73 -1.2 2,155,448 + AO353_09870 0.80 -1.2 2,155,448 + AO353_09870 0.80 +0.0 2,155,448 + AO353_09870 0.80 -0.9 2,155,448 + AO353_09870 0.80 -2.2 2,155,449 - AO353_09870 0.80 -0.3 2,155,449 - AO353_09870 0.80 -0.2 2,155,449 - AO353_09870 0.80 -1.4 2,155,449 - AO353_09870 0.80 -0.5 2,155,524 + AO353_09870 0.88 +1.2 2,155,524 + AO353_09870 0.88 +0.3 2,155,524 + AO353_09870 0.88 -0.2 2,155,525 - AO353_09870 0.89 -0.0 2,155,525 - AO353_09870 0.89 +0.4 2,155,525 - AO353_09870 0.89 -0.5 2,155,525 - AO353_09870 0.89 -0.9 2,155,525 - AO353_09870 0.89 +0.8 2,155,555 + -0.3 2,155,555 + +0.8 2,155,555 + -1.7 2,155,555 + -0.0 2,155,555 + -0.4 2,155,556 - -0.7 2,155,556 - +1.3 2,155,556 - -1.2 2,155,557 + -0.4 2,155,557 + -1.0 2,155,557 + -0.3 2,155,557 + +0.3 2,155,557 + -0.1 2,155,557 + +0.8 2,155,558 - -1.8 2,155,558 - -0.9 2,155,558 - -0.5 2,155,558 - -0.9 2,155,558 - +0.8 2,155,558 - +0.3 2,155,558 - -0.7 2,155,561 + +1.7 2,155,561 + -1.6 2,155,561 + -1.7 2,155,561 + -0.7 2,155,561 + +0.4 2,155,561 + -0.7 2,155,561 + -0.1 2,155,561 + +1.7 2,155,561 + -0.9 2,155,561 + +0.2 2,155,561 + -0.1 2,155,561 + -1.6 2,155,561 + -0.9 2,155,561 + -0.6 2,155,562 - -0.7 2,155,562 - +0.1 2,155,562 - -0.8 2,155,562 - -0.1 2,155,562 - -1.6 2,155,562 - -0.5 2,155,562 - -0.0 2,155,562 - -0.7 2,155,562 - +1.8 2,155,562 - -0.3 2,155,562 - +0.1 2,155,562 - +0.5 2,155,562 - +1.7 2,155,627 + +0.1 2,155,627 + +0.1 2,155,627 + +0.0 2,155,627 + +1.9 2,155,627 + -1.0 2,155,627 + +0.8 2,155,627 + -0.9 2,155,627 + -1.3 2,155,627 + -0.2 2,155,628 - +0.4 2,155,628 - -0.3 2,155,628 - -1.0 2,155,628 - +0.3 2,155,628 - +0.3 2,155,628 - -0.9 2,155,628 - -0.4 2,155,628 - -0.2 2,155,628 - +0.4 2,155,628 - +0.5 2,155,628 - -0.4 2,155,628 - +0.1 2,155,628 - +2.3 2,155,628 - +0.5 2,155,628 - -0.2 2,155,628 - +0.5 2,155,665 - -0.7 2,155,665 - +0.4 2,155,665 - -1.2 2,155,686 + -1.5 2,155,687 - +0.5 2,155,843 + -0.7 2,155,843 + +0.1 2,155,843 + -0.2 2,155,843 + -2.4 2,155,843 + -1.3 2,155,844 - -0.3 2,155,844 - +0.7 2,155,844 - -0.8 2,155,844 - -0.2 2,155,844 - +0.7 2,155,844 - +1.3 2,155,858 + +1.4 2,155,859 - +0.3 2,155,933 + AO353_09875 0.23 +0.4 2,155,933 + AO353_09875 0.23 +0.1 2,155,933 + AO353_09875 0.23 +0.7 2,156,237 + +0.1 2,156,237 + -0.9 2,156,237 + -0.3 2,156,237 + -0.3 2,156,237 + -0.2 2,156,237 + +0.7 2,156,237 + -0.0 2,156,237 + -1.2 2,156,237 + -0.7 2,156,252 + +0.2 2,156,252 + +0.2 2,156,252 + +2.1 2,156,253 - -1.4 2,156,253 - +0.9 2,156,253 - -1.2 2,156,253 - -0.4 2,156,253 - -1.2 2,156,253 - -0.5 2,156,381 + +0.2 2,156,381 + -0.5 2,156,400 + -1.0 2,156,400 + +0.3 2,156,408 + +0.1 2,156,408 + -0.9 2,156,408 + -0.3 2,156,408 + +1.7 2,156,408 + -1.3 2,156,408 + -1.3 2,156,408 + +1.7 2,156,408 + +1.3 2,156,408 + -0.7 2,156,408 + +0.7 2,156,408 + -0.2 2,156,408 + +0.2 2,156,408 + -1.0 2,156,408 + -0.3 2,156,408 + -0.2 2,156,408 + -0.9 2,156,409 - +0.1 2,156,409 - +0.9 2,156,409 - -0.3 2,156,409 - +0.3 2,156,409 - -0.5 2,156,409 - -0.5 2,156,409 - -1.7 2,156,409 - +0.7 2,156,409 - +0.1 2,156,409 - -1.2 2,156,409 - +1.3 2,156,409 - -0.2 2,156,409 - -0.3 2,156,409 - +0.8 2,156,409 - +0.3 2,156,409 - -0.5 2,156,409 - +0.7 2,156,497 - -0.8 2,156,497 - -1.4 2,156,497 - -0.1 2,156,497 - +0.2 2,156,497 - +0.7 2,156,497 - -0.3 2,156,497 - +0.5 2,156,497 - +0.1 2,156,497 - -0.2 2,156,497 - -2.2 2,156,513 + +0.1 2,156,514 - +0.1 2,156,514 - -1.2 2,156,571 + -0.7 2,156,572 - -0.7 2,156,596 + +0.8 2,156,596 + +0.2 2,156,596 + +0.1 2,156,596 + -1.6 2,156,596 + +2.1 2,156,596 + +1.2 2,156,596 + +0.3 2,156,596 + +0.7 2,156,596 + -1.2 2,156,597 - +0.7 2,156,597 - +0.8 2,156,600 + +0.0 2,156,600 + -0.5 2,156,600 + +0.2 2,156,600 + -0.7 2,156,600 + +1.4 2,156,600 + -0.3 2,156,600 + +0.1 2,156,600 + +1.5 2,156,601 - +0.1 2,156,601 - +0.2 2,156,612 - -1.2 2,156,657 + -0.0 2,156,657 + +0.8 2,156,657 + +0.7 2,156,657 + +0.3 2,156,657 + +0.2 2,156,657 + +0.7 2,156,657 + +2.7 2,156,657 + +1.0 2,156,657 + -2.2 2,156,657 + +1.7 2,156,658 - +0.2 2,156,658 - -0.3 2,156,658 - -0.3 2,156,658 - -0.9 2,156,658 - +0.2 2,156,658 - +1.1 2,156,658 - -0.2 2,156,658 - +0.7 2,156,658 - +0.2 2,156,658 - -0.7 2,156,658 - +0.3 2,156,658 - +0.6 2,156,658 - +0.3 2,156,658 - -0.3 2,156,658 - -0.3 2,156,753 + AO353_09880 0.16 -0.6 2,156,753 + AO353_09880 0.16 -0.0 2,156,753 + AO353_09880 0.16 +0.2 2,156,898 + AO353_09880 0.31 -0.4 2,156,898 + AO353_09880 0.31 -0.9 2,156,899 - AO353_09880 0.32 -0.3 2,156,899 - AO353_09880 0.32 +0.2 2,156,914 + AO353_09880 0.33 -0.8 2,156,914 + AO353_09880 0.33 -0.3 2,156,914 + AO353_09880 0.33 -0.5 2,156,914 + AO353_09880 0.33 +1.3 2,156,914 + AO353_09880 0.33 -1.0 2,156,914 + AO353_09880 0.33 -0.3 2,156,914 + AO353_09880 0.33 +1.7 2,156,914 + AO353_09880 0.33 +0.7 2,156,914 + AO353_09880 0.33 +0.5 2,156,914 + AO353_09880 0.33 +0.8 2,156,914 + AO353_09880 0.33 -1.7 2,156,915 - AO353_09880 0.33 +0.3 2,156,915 - AO353_09880 0.33 +0.8 2,156,915 - AO353_09880 0.33 +0.3 2,156,915 - AO353_09880 0.33 -0.7 2,156,915 - AO353_09880 0.33 -1.2
Or see this region's nucleotide sequence