Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_09720

Experiment: L-Aspartic Acid (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Aspartic Acid (C)
2,131,648	+		AO353_09710	0.34	+0.5
2,131,648	+		AO353_09710	0.34	-1.0
2,131,648	+		AO353_09710	0.34	+0.8
2,131,648	+		AO353_09710	0.34	+1.4
2,131,648	+		AO353_09710	0.34	-0.4
2,131,648	+		AO353_09710	0.34	-1.4
2,131,648	+		AO353_09710	0.34	-1.0
2,131,648	+		AO353_09710	0.34	+0.6
2,131,649	-		AO353_09710	0.34	-0.3
2,131,649	-		AO353_09710	0.34	+1.1
2,131,649	-		AO353_09710	0.34	-0.5
2,131,649	-		AO353_09710	0.34	-0.3
2,131,649	-		AO353_09710	0.34	-0.6
2,131,649	-		AO353_09710	0.34	+0.6
2,131,649	-		AO353_09710	0.34	-0.4
2,131,649	-		AO353_09710	0.34	-1.2
2,131,650	+		AO353_09710	0.34	+0.1
2,131,650	+		AO353_09710	0.34	-0.4
2,131,650	+		AO353_09710	0.34	+0.3
2,131,651	-		AO353_09710	0.35	+0.2
2,131,651	-		AO353_09710	0.35	-0.5
2,131,651	-		AO353_09710	0.35	+1.3
2,131,651	-		AO353_09710	0.35	-0.7
2,131,651	-		AO353_09710	0.35	-0.4
2,131,651	-		AO353_09710	0.35	-1.4
2,131,651	-		AO353_09710	0.35	-0.9
2,131,651	-		AO353_09710	0.35	-1.3
2,131,681	-		AO353_09710	0.43	-1.4
2,131,681	-		AO353_09710	0.43	+0.8
2,131,735	+		AO353_09710	0.58	-1.0
2,131,735	+		AO353_09710	0.58	+0.5
2,131,735	+		AO353_09710	0.58	-0.5
2,131,735	+		AO353_09710	0.58	+1.9
2,131,735	+		AO353_09710	0.58	+0.3
2,131,736	-		AO353_09710	0.59	+1.2
2,131,736	-		AO353_09710	0.59	+2.4
2,131,736	-		AO353_09710	0.59	-1.0
2,131,736	-		AO353_09710	0.59	+1.6
2,131,762	+		AO353_09710	0.66	-0.4
2,131,763	-		AO353_09710	0.66	+0.3
2,131,782	+		AO353_09710	0.72	-0.5
2,131,783	-		AO353_09710	0.72	-1.7
2,131,783	-		AO353_09710	0.72	+0.2
2,131,786	+		AO353_09710	0.73	-1.5
2,131,786	+		AO353_09710	0.73	+0.5
2,131,786	+		AO353_09710	0.73	-0.8
2,131,786	+		AO353_09710	0.73	+0.3
2,131,786	+		AO353_09710	0.73	+1.0
2,131,786	+		AO353_09710	0.73	-0.1
2,131,787	-		AO353_09710	0.73	+0.3
2,131,787	-		AO353_09710	0.73	+0.8
2,131,787	-		AO353_09710	0.73	+0.6
2,131,787	-		AO353_09710	0.73	+2.0
2,131,808	+		AO353_09710	0.79	-2.7
2,131,809	-		AO353_09710	0.79	-0.5
2,131,819	-		AO353_09710	0.82	+1.0
2,131,918	+				+0.0
2,131,980	-		AO353_09715	0.18	-0.5
2,132,002	+		AO353_09715	0.23	-2.0
2,132,003	-		AO353_09715	0.23	-0.4
2,132,011	+		AO353_09715	0.25	+1.4
2,132,011	+		AO353_09715	0.25	-0.4
2,132,012	-		AO353_09715	0.25	-1.1
2,132,012	-		AO353_09715	0.25	-0.8
2,132,012	-		AO353_09715	0.25	-0.7
2,132,012	-		AO353_09715	0.25	-0.5
2,132,038	+		AO353_09715	0.30	+0.3
2,132,038	+		AO353_09715	0.30	-0.2
2,132,038	+		AO353_09715	0.30	+0.5
2,132,039	-		AO353_09715	0.31	-1.5
2,132,039	-		AO353_09715	0.31	+0.2
2,132,094	+		AO353_09715	0.42	-0.8
2,132,094	+		AO353_09715	0.42	-0.7
2,132,094	+		AO353_09715	0.42	-1.4
2,132,095	-		AO353_09715	0.42	-0.2
2,132,095	-		AO353_09715	0.42	+0.0
2,132,095	-		AO353_09715	0.42	+2.6
2,132,095	-		AO353_09715	0.42	-1.5
2,132,098	+		AO353_09715	0.43	+0.1
2,132,098	+		AO353_09715	0.43	-1.0
2,132,098	+		AO353_09715	0.43	+1.2
2,132,098	+		AO353_09715	0.43	+1.3
2,132,098	+		AO353_09715	0.43	-0.5
2,132,098	+		AO353_09715	0.43	+0.0
2,132,098	+		AO353_09715	0.43	-0.8
2,132,098	+		AO353_09715	0.43	-1.4
2,132,099	-		AO353_09715	0.43	+0.6
2,132,099	-		AO353_09715	0.43	-0.5
2,132,099	-		AO353_09715	0.43	+3.0
2,132,099	-		AO353_09715	0.43	-0.4
2,132,099	-		AO353_09715	0.43	-1.1
2,132,099	-		AO353_09715	0.43	-0.2
2,132,099	-		AO353_09715	0.43	-0.3
2,132,125	+		AO353_09715	0.49	-0.2
2,132,125	+		AO353_09715	0.49	-1.5
2,132,125	+		AO353_09715	0.49	-0.5
2,132,125	+		AO353_09715	0.49	-0.5
2,132,125	+		AO353_09715	0.49	+0.6
2,132,125	+		AO353_09715	0.49	+0.0
2,132,125	+		AO353_09715	0.49	-0.4
2,132,125	+		AO353_09715	0.49	+0.8
2,132,125	+		AO353_09715	0.49	+0.0
2,132,126	-		AO353_09715	0.49	+0.4
2,132,126	-		AO353_09715	0.49	-0.8
2,132,233	+		AO353_09715	0.72	-0.2
2,132,233	+		AO353_09715	0.72	+0.5
2,132,233	+		AO353_09715	0.72	+0.1
2,132,233	+		AO353_09715	0.72	-0.1
2,132,234	-		AO353_09715	0.72	+0.4
2,132,234	-		AO353_09715	0.72	+2.3
2,132,234	-		AO353_09715	0.72	+0.3
2,132,234	-		AO353_09715	0.72	-0.5
2,132,234	-		AO353_09715	0.72	+2.0
2,132,256	+		AO353_09715	0.76	-1.1
2,132,301	+		AO353_09715	0.86	+0.2
2,132,301	+		AO353_09715	0.86	+1.3
2,132,301	+		AO353_09715	0.86	+0.2
2,132,301	+		AO353_09715	0.86	+0.2
2,132,301	+		AO353_09715	0.86	-0.8
2,132,301	+		AO353_09715	0.86	+1.2
2,132,301	+		AO353_09715	0.86	-0.2
2,132,302	-		AO353_09715	0.86	-0.1
2,132,302	-		AO353_09715	0.86	-0.4
2,132,302	-		AO353_09715	0.86	+0.5
2,132,302	-		AO353_09715	0.86	+0.1
2,132,302	-		AO353_09715	0.86	-0.4
2,132,302	-		AO353_09715	0.86	+0.0
2,132,302	-		AO353_09715	0.86	+1.6
2,132,365	+				+1.4
2,132,365	+				-1.5
2,132,365	+				-0.5
2,132,366	-				+0.3
2,132,366	-				-1.0
2,132,366	-				-0.5
2,132,477	-				+0.8
2,132,477	-				-0.3
2,132,477	-				-0.5
2,132,495	+				-0.7
2,132,495	+				+0.3
2,132,495	+				-0.7
2,132,495	+				-1.7
2,132,496	-				-0.9
2,132,496	-				-2.3
2,132,545	+				-0.8
2,132,545	+				-1.0
2,132,546	-				+0.1
2,132,546	-				+0.9
2,132,546	-				+0.6
2,132,546	-				+1.0
2,132,546	-				+0.6
2,132,566	+				-0.3
2,132,566	+				-0.2
2,132,566	+				-0.4
2,132,566	+				-1.7
2,132,566	+				+1.0
2,132,566	+				+1.1
2,132,567	-				+0.3
2,132,567	-				-0.4
2,132,567	-				-0.8
2,132,567	-				+0.3
2,132,567	-				+0.0
2,132,567	-				-0.2
2,132,567	-				+1.3
2,132,567	-				-0.5
2,132,617	+				+0.3
2,132,617	+				-0.5
2,132,618	-				+1.6
2,132,618	-				-0.0
2,132,618	-				+0.3
2,132,618	-				+0.6
2,132,678	-				-0.2
2,132,834	-		AO353_09720	0.19	-0.8
2,132,834	-		AO353_09720	0.19	+1.0
2,133,439	+				+1.0
2,133,443	-		AO353_09720	0.78	-0.5
2,133,648	-				+0.9
2,133,658	-				-0.4
2,133,682	-				-1.2
2,133,712	+				+0.3
2,133,764	+				-0.4
2,133,765	-				+0.0
2,133,822	+				-0.2
2,133,822	+				-0.5
2,133,823	-				+0.8
2,133,823	-				-1.8
2,133,823	-				-0.3
2,133,829	+				+0.2
2,133,829	+				+0.5
2,133,830	-				-0.5
2,133,869	-				-2.2
2,133,898	+		AO353_09725	0.14	+0.4
2,133,898	+		AO353_09725	0.14	+1.0
2,133,898	+		AO353_09725	0.14	-0.4
2,133,899	-		AO353_09725	0.14	+0.3
2,133,899	-		AO353_09725	0.14	+1.1
2,133,918	+		AO353_09725	0.18	-0.2
2,133,918	+		AO353_09725	0.18	-1.1
2,133,918	+		AO353_09725	0.18	-1.0
2,133,919	-		AO353_09725	0.18	-1.5
2,133,965	+		AO353_09725	0.25	-1.1
2,134,034	-		AO353_09725	0.36	-0.5
2,134,057	+		AO353_09725	0.40	+1.0
2,134,058	-		AO353_09725	0.40	-0.0
2,134,063	+		AO353_09725	0.41	-1.0
2,134,063	+		AO353_09725	0.41	-1.2
2,134,063	+		AO353_09725	0.41	-0.8
2,134,063	+		AO353_09725	0.41	-0.6
2,134,063	+		AO353_09725	0.41	+0.1
2,134,064	-		AO353_09725	0.41	+0.6
2,134,064	-		AO353_09725	0.41	+2.6
2,134,064	-		AO353_09725	0.41	-1.3
2,134,089	-		AO353_09725	0.45	+0.9
2,134,095	+		AO353_09725	0.46	+0.2
2,134,096	-		AO353_09725	0.47	-0.3
2,134,096	-		AO353_09725	0.47	-1.0
2,134,139	-		AO353_09725	0.53	-1.6
2,134,154	+		AO353_09725	0.56	+1.3
2,134,154	+		AO353_09725	0.56	+0.8
2,134,157	+		AO353_09725	0.56	-0.2
2,134,158	-		AO353_09725	0.57	+0.2
2,134,304	+		AO353_09725	0.80	-0.6
2,134,305	-		AO353_09725	0.80	+0.4
2,134,305	-		AO353_09725	0.80	+1.3
2,134,305	-		AO353_09725	0.80	-0.6
2,134,305	-		AO353_09725	0.80	+0.3
2,134,305	-		AO353_09725	0.80	-0.2
2,134,309	-		AO353_09725	0.81	+0.8
2,134,309	-		AO353_09725	0.81	+0.5
2,134,325	+		AO353_09725	0.84	-1.2
2,134,326	-		AO353_09725	0.84	+1.0
2,134,345	+		AO353_09725	0.87	-0.7
2,134,346	-		AO353_09725	0.87	+0.8
2,134,346	-		AO353_09725	0.87	-0.6
2,134,415	-				-0.3
2,134,430	+				-0.0
2,134,443	+				-0.4
2,134,444	-				+1.4
2,134,444	-				+1.6
2,134,451	+				-1.3
2,134,452	-				+0.3
2,134,452	-				+1.0
2,134,475	+				+0.9
2,134,476	-				+1.0
2,134,476	-				+0.7
2,134,506	+				-1.2
2,134,507	-				-0.4
2,134,507	-				-0.3
2,134,507	-				+1.0
2,134,519	+				-1.8
2,134,519	+				-0.4
2,134,519	+				+0.9
2,134,519	+				-0.8
2,134,519	+				+0.3
2,134,519	+				+0.4
2,134,519	+				+0.2
2,134,519	+				+0.3
2,134,519	+				-0.3
2,134,519	+				+1.3
2,134,519	+				-0.2
2,134,520	-				+0.8
2,134,520	-				-0.2
2,134,520	-				+0.6
2,134,520	-				-0.3
2,134,520	-				-0.1
2,134,520	-				-0.7
2,134,520	-				+0.0
2,134,520	-				+0.8
2,134,520	-				-1.4
2,134,520	-				+0.3
2,134,520	-				-0.0
2,134,520	-				-1.3
2,134,543	-				+1.0
2,134,585	+		AO353_09730	0.14	+0.9
2,134,585	+		AO353_09730	0.14	-0.1
2,134,586	-		AO353_09730	0.15	+0.9
2,134,586	-		AO353_09730	0.15	-0.6
2,134,586	-		AO353_09730	0.15	+1.3
2,134,586	-		AO353_09730	0.15	-0.4
2,134,653	+		AO353_09730	0.33	-0.7
2,134,653	+		AO353_09730	0.33	-0.2
2,134,653	+		AO353_09730	0.33	+1.9
2,134,653	+		AO353_09730	0.33	+0.0
2,134,653	+		AO353_09730	0.33	+1.3
2,134,653	+		AO353_09730	0.33	-0.4
2,134,653	+		AO353_09730	0.33	-2.1
2,134,654	-		AO353_09730	0.33	+1.6
2,134,654	-		AO353_09730	0.33	-0.7
2,134,654	-		AO353_09730	0.33	+0.1
2,134,654	-		AO353_09730	0.33	+0.3
2,134,654	-		AO353_09730	0.33	-0.2
2,134,654	-		AO353_09730	0.33	-0.4
2,134,654	-		AO353_09730	0.33	-0.8
2,134,654	-		AO353_09730	0.33	+2.6