Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09480 and AO353_09485 are separated by 92 nucleotides AO353_09485 and AO353_09490 are separated by 5 nucleotides AO353_09490 and AO353_09495 overlap by 1 nucleotides AO353_09495 and AO353_09500 overlap by 1 nucleotides AO353_09500 and AO353_09505 are separated by 152 nucleotides
AO353_09480: AO353_09480 - hypothetical protein, at 2,080,886 to 2,081,269
_09480
AO353_09485: AO353_09485 - hypothetical protein, at 2,081,362 to 2,081,580
_09485
AO353_09490: AO353_09490 - hypothetical protein, at 2,081,586 to 2,082,017
_09490
AO353_09495: AO353_09495 - hypothetical protein, at 2,082,017 to 2,082,403
_09495
AO353_09500: AO353_09500 - hypothetical protein, at 2,082,403 to 2,082,816
_09500
AO353_09505: AO353_09505 - hypothetical protein, at 2,082,969 to 2,083,355
_09505
Position (kb)
2082
2083 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2081.025 kb on + strand, within AO353_09480 at 2081.025 kb on + strand, within AO353_09480 at 2081.025 kb on + strand, within AO353_09480 at 2081.025 kb on + strand, within AO353_09480 at 2081.026 kb on - strand, within AO353_09480 at 2081.026 kb on - strand, within AO353_09480 at 2081.026 kb on - strand, within AO353_09480 at 2081.026 kb on - strand, within AO353_09480 at 2081.061 kb on + strand, within AO353_09480 at 2081.061 kb on + strand, within AO353_09480 at 2081.061 kb on + strand, within AO353_09480 at 2081.062 kb on - strand, within AO353_09480 at 2081.062 kb on - strand, within AO353_09480 at 2081.062 kb on - strand, within AO353_09480 at 2081.062 kb on - strand, within AO353_09480 at 2081.187 kb on + strand, within AO353_09480 at 2081.187 kb on + strand, within AO353_09480 at 2081.187 kb on + strand, within AO353_09480 at 2081.187 kb on + strand, within AO353_09480 at 2081.187 kb on + strand, within AO353_09480 at 2081.187 kb on + strand, within AO353_09480 at 2081.187 kb on + strand, within AO353_09480 at 2081.188 kb on - strand, within AO353_09480 at 2081.188 kb on - strand, within AO353_09480 at 2081.188 kb on - strand, within AO353_09480 at 2081.188 kb on - strand, within AO353_09480 at 2081.188 kb on - strand, within AO353_09480 at 2081.188 kb on - strand, within AO353_09480 at 2081.188 kb on - strand, within AO353_09480 at 2081.202 kb on + strand, within AO353_09480 at 2081.202 kb on + strand, within AO353_09480 at 2081.202 kb on + strand, within AO353_09480 at 2081.202 kb on + strand, within AO353_09480 at 2081.203 kb on - strand, within AO353_09480 at 2081.224 kb on + strand, within AO353_09480 at 2081.263 kb on + strand at 2081.263 kb on + strand at 2081.263 kb on + strand at 2081.263 kb on + strand at 2081.263 kb on + strand at 2081.263 kb on + strand at 2081.263 kb on + strand at 2081.263 kb on + strand at 2081.278 kb on + strand at 2081.278 kb on + strand at 2081.278 kb on + strand at 2081.278 kb on + strand at 2081.278 kb on + strand at 2081.278 kb on + strand at 2081.278 kb on + strand at 2081.279 kb on - strand at 2081.279 kb on - strand at 2081.279 kb on - strand at 2081.281 kb on + strand at 2081.281 kb on + strand at 2081.282 kb on - strand at 2081.282 kb on - strand at 2081.282 kb on - strand at 2081.282 kb on - strand at 2081.335 kb on + strand at 2081.359 kb on + strand at 2081.359 kb on + strand at 2081.360 kb on - strand at 2081.360 kb on - strand at 2081.360 kb on - strand at 2081.387 kb on + strand, within AO353_09485 at 2081.387 kb on + strand, within AO353_09485 at 2081.387 kb on + strand, within AO353_09485 at 2081.387 kb on + strand, within AO353_09485 at 2081.387 kb on + strand, within AO353_09485 at 2081.387 kb on + strand, within AO353_09485 at 2081.388 kb on - strand, within AO353_09485 at 2081.388 kb on - strand, within AO353_09485 at 2081.388 kb on - strand, within AO353_09485 at 2081.388 kb on - strand, within AO353_09485 at 2081.388 kb on - strand, within AO353_09485 at 2081.402 kb on + strand, within AO353_09485 at 2081.403 kb on - strand, within AO353_09485 at 2081.403 kb on - strand, within AO353_09485 at 2081.403 kb on - strand, within AO353_09485 at 2081.403 kb on - strand, within AO353_09485 at 2081.552 kb on + strand, within AO353_09485 at 2081.553 kb on - strand, within AO353_09485 at 2081.560 kb on + strand at 2081.560 kb on + strand at 2081.605 kb on + strand at 2081.605 kb on + strand at 2081.605 kb on + strand at 2081.606 kb on - strand at 2081.606 kb on - strand at 2081.606 kb on - strand at 2081.628 kb on - strand at 2081.692 kb on + strand, within AO353_09490 at 2081.759 kb on - strand, within AO353_09490 at 2081.760 kb on + strand, within AO353_09490 at 2081.760 kb on + strand, within AO353_09490 at 2081.760 kb on + strand, within AO353_09490 at 2081.813 kb on - strand, within AO353_09490 at 2081.813 kb on - strand, within AO353_09490 at 2081.844 kb on + strand, within AO353_09490 at 2081.845 kb on - strand, within AO353_09490 at 2081.866 kb on + strand, within AO353_09490 at 2082.110 kb on - strand, within AO353_09495 at 2082.110 kb on - strand, within AO353_09495 at 2082.130 kb on - strand, within AO353_09495 at 2082.150 kb on - strand, within AO353_09495 at 2082.168 kb on + strand, within AO353_09495 at 2082.224 kb on + strand, within AO353_09495 at 2082.225 kb on - strand, within AO353_09495 at 2082.225 kb on - strand, within AO353_09495 at 2082.235 kb on - strand, within AO353_09495 at 2082.246 kb on + strand, within AO353_09495 at 2082.247 kb on - strand, within AO353_09495 at 2082.258 kb on + strand, within AO353_09495 at 2082.258 kb on + strand, within AO353_09495 at 2082.258 kb on + strand, within AO353_09495 at 2082.259 kb on - strand, within AO353_09495 at 2082.370 kb on + strand at 2082.371 kb on - strand at 2082.502 kb on - strand, within AO353_09500 at 2082.517 kb on + strand, within AO353_09500 at 2082.517 kb on + strand, within AO353_09500 at 2082.518 kb on - strand, within AO353_09500 at 2082.518 kb on - strand, within AO353_09500 at 2082.518 kb on - strand, within AO353_09500 at 2082.518 kb on - strand, within AO353_09500 at 2082.518 kb on - strand, within AO353_09500 at 2082.518 kb on - strand, within AO353_09500 at 2082.518 kb on - strand, within AO353_09500 at 2082.518 kb on - strand, within AO353_09500 at 2082.591 kb on - strand, within AO353_09500 at 2082.629 kb on + strand, within AO353_09500 at 2082.629 kb on + strand, within AO353_09500 at 2082.630 kb on - strand, within AO353_09500 at 2082.630 kb on - strand, within AO353_09500 at 2082.679 kb on - strand, within AO353_09500 at 2082.683 kb on + strand, within AO353_09500 at 2082.789 kb on - strand at 2082.789 kb on - strand at 2082.921 kb on - strand at 2082.978 kb on - strand at 2083.056 kb on - strand, within AO353_09505 at 2083.170 kb on + strand, within AO353_09505 at 2083.171 kb on - strand, within AO353_09505 at 2083.224 kb on + strand, within AO353_09505 at 2083.224 kb on + strand, within AO353_09505 at 2083.257 kb on - strand, within AO353_09505 at 2083.267 kb on + strand, within AO353_09505 at 2083.326 kb on - strand at 2083.340 kb on + strand at 2083.348 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 2,081,025 + AO353_09480 0.36 +0.4 2,081,025 + AO353_09480 0.36 -0.1 2,081,025 + AO353_09480 0.36 -0.7 2,081,025 + AO353_09480 0.36 -0.6 2,081,026 - AO353_09480 0.36 +0.2 2,081,026 - AO353_09480 0.36 -0.2 2,081,026 - AO353_09480 0.36 -0.5 2,081,026 - AO353_09480 0.36 +0.3 2,081,061 + AO353_09480 0.46 +1.3 2,081,061 + AO353_09480 0.46 +1.9 2,081,061 + AO353_09480 0.46 +0.4 2,081,062 - AO353_09480 0.46 -1.0 2,081,062 - AO353_09480 0.46 +0.2 2,081,062 - AO353_09480 0.46 -1.7 2,081,062 - AO353_09480 0.46 +0.2 2,081,187 + AO353_09480 0.78 -0.0 2,081,187 + AO353_09480 0.78 +0.5 2,081,187 + AO353_09480 0.78 -1.2 2,081,187 + AO353_09480 0.78 +0.5 2,081,187 + AO353_09480 0.78 -0.7 2,081,187 + AO353_09480 0.78 -0.3 2,081,187 + AO353_09480 0.78 -0.3 2,081,188 - AO353_09480 0.79 +1.0 2,081,188 - AO353_09480 0.79 +0.1 2,081,188 - AO353_09480 0.79 -0.2 2,081,188 - AO353_09480 0.79 +0.2 2,081,188 - AO353_09480 0.79 -0.2 2,081,188 - AO353_09480 0.79 -0.0 2,081,188 - AO353_09480 0.79 -1.0 2,081,202 + AO353_09480 0.82 +0.4 2,081,202 + AO353_09480 0.82 -0.4 2,081,202 + AO353_09480 0.82 +0.0 2,081,202 + AO353_09480 0.82 -0.8 2,081,203 - AO353_09480 0.83 -2.1 2,081,224 + AO353_09480 0.88 -0.6 2,081,263 + -0.7 2,081,263 + -1.9 2,081,263 + +1.3 2,081,263 + -0.3 2,081,263 + +1.6 2,081,263 + +0.8 2,081,263 + +1.6 2,081,263 + +0.6 2,081,278 + -0.1 2,081,278 + -0.1 2,081,278 + -0.0 2,081,278 + +1.0 2,081,278 + +0.9 2,081,278 + -0.5 2,081,278 + -0.4 2,081,279 - +1.0 2,081,279 - -0.4 2,081,279 - -0.3 2,081,281 + +0.3 2,081,281 + -0.1 2,081,282 - +0.6 2,081,282 - -1.5 2,081,282 - +0.4 2,081,282 - +0.0 2,081,335 + -1.0 2,081,359 + +0.6 2,081,359 + -0.7 2,081,360 - -1.0 2,081,360 - -0.5 2,081,360 - -0.3 2,081,387 + AO353_09485 0.11 +0.4 2,081,387 + AO353_09485 0.11 +1.3 2,081,387 + AO353_09485 0.11 -0.1 2,081,387 + AO353_09485 0.11 +0.6 2,081,387 + AO353_09485 0.11 +1.0 2,081,387 + AO353_09485 0.11 -0.4 2,081,388 - AO353_09485 0.12 +0.7 2,081,388 - AO353_09485 0.12 +0.9 2,081,388 - AO353_09485 0.12 -0.6 2,081,388 - AO353_09485 0.12 -0.4 2,081,388 - AO353_09485 0.12 +1.2 2,081,402 + AO353_09485 0.18 -0.2 2,081,403 - AO353_09485 0.19 -0.4 2,081,403 - AO353_09485 0.19 -0.8 2,081,403 - AO353_09485 0.19 -0.2 2,081,403 - AO353_09485 0.19 +1.0 2,081,552 + AO353_09485 0.87 +2.3 2,081,553 - AO353_09485 0.87 -0.5 2,081,560 + -0.6 2,081,560 + -0.0 2,081,605 + +0.8 2,081,605 + +1.2 2,081,605 + +0.8 2,081,606 - -1.2 2,081,606 - -2.1 2,081,606 - -0.4 2,081,628 - -0.0 2,081,692 + AO353_09490 0.25 -0.9 2,081,759 - AO353_09490 0.40 +0.1 2,081,760 + AO353_09490 0.40 +0.1 2,081,760 + AO353_09490 0.40 +1.0 2,081,760 + AO353_09490 0.40 -1.3 2,081,813 - AO353_09490 0.53 +1.0 2,081,813 - AO353_09490 0.53 +0.0 2,081,844 + AO353_09490 0.60 +0.0 2,081,845 - AO353_09490 0.60 -1.0 2,081,866 + AO353_09490 0.65 +0.6 2,082,110 - AO353_09495 0.24 -0.0 2,082,110 - AO353_09495 0.24 +0.3 2,082,130 - AO353_09495 0.29 -0.6 2,082,150 - AO353_09495 0.34 -0.6 2,082,168 + AO353_09495 0.39 +1.0 2,082,224 + AO353_09495 0.53 -0.8 2,082,225 - AO353_09495 0.54 -1.4 2,082,225 - AO353_09495 0.54 +1.2 2,082,235 - AO353_09495 0.56 +0.3 2,082,246 + AO353_09495 0.59 +0.6 2,082,247 - AO353_09495 0.59 -0.4 2,082,258 + AO353_09495 0.62 +1.6 2,082,258 + AO353_09495 0.62 +1.2 2,082,258 + AO353_09495 0.62 +2.6 2,082,259 - AO353_09495 0.63 +0.5 2,082,370 + +0.3 2,082,371 - -1.0 2,082,502 - AO353_09500 0.24 +0.5 2,082,517 + AO353_09500 0.28 -1.0 2,082,517 + AO353_09500 0.28 +0.6 2,082,518 - AO353_09500 0.28 -0.1 2,082,518 - AO353_09500 0.28 -1.1 2,082,518 - AO353_09500 0.28 -1.6 2,082,518 - AO353_09500 0.28 +0.0 2,082,518 - AO353_09500 0.28 -0.2 2,082,518 - AO353_09500 0.28 -0.5 2,082,518 - AO353_09500 0.28 -0.4 2,082,518 - AO353_09500 0.28 +0.1 2,082,591 - AO353_09500 0.45 +0.6 2,082,629 + AO353_09500 0.55 +0.3 2,082,629 + AO353_09500 0.55 +0.6 2,082,630 - AO353_09500 0.55 +0.6 2,082,630 - AO353_09500 0.55 -0.6 2,082,679 - AO353_09500 0.67 +2.4 2,082,683 + AO353_09500 0.68 -1.1 2,082,789 - +0.3 2,082,789 - +0.0 2,082,921 - +0.3 2,082,978 - -0.2 2,083,056 - AO353_09505 0.22 -0.4 2,083,170 + AO353_09505 0.52 -1.5 2,083,171 - AO353_09505 0.52 -1.6 2,083,224 + AO353_09505 0.66 +0.6 2,083,224 + AO353_09505 0.66 -0.6 2,083,257 - AO353_09505 0.74 -1.5 2,083,267 + AO353_09505 0.77 -0.5 2,083,326 - -0.7 2,083,340 + -0.3 2,083,348 - -1.1
Or see this region's nucleotide sequence