Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_09145 and AO353_09150 are separated by 91 nucleotides AO353_09150 and AO353_09155 overlap by 29 nucleotides
AO353_09145: AO353_09145 - alanine racemase, at 2,009,082 to 2,010,155
_09145
AO353_09150: AO353_09150 - cytochrome C2, at 2,010,247 to 2,010,600
_09150
AO353_09155: AO353_09155 - amino acid dehydrogenase, at 2,010,572 to 2,011,876
_09155
Position (kb)
2010
2011 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2010.170 kb on - strand at 2010.170 kb on - strand at 2010.170 kb on - strand at 2010.249 kb on - strand at 2010.265 kb on + strand at 2010.533 kb on + strand, within AO353_09150 at 2010.534 kb on - strand, within AO353_09150 at 2010.534 kb on - strand, within AO353_09150 at 2010.534 kb on - strand, within AO353_09150 at 2010.534 kb on - strand, within AO353_09150 at 2010.534 kb on - strand, within AO353_09150 at 2010.641 kb on - strand at 2010.641 kb on - strand at 2010.859 kb on - strand, within AO353_09155 at 2010.927 kb on - strand, within AO353_09155 at 2010.984 kb on + strand, within AO353_09155 at 2010.984 kb on + strand, within AO353_09155 at 2010.984 kb on + strand, within AO353_09155 at 2010.984 kb on + strand, within AO353_09155 at 2010.984 kb on + strand, within AO353_09155 at 2010.984 kb on + strand, within AO353_09155 at 2010.984 kb on + strand, within AO353_09155 at 2010.984 kb on + strand, within AO353_09155 at 2010.985 kb on - strand, within AO353_09155 at 2010.985 kb on - strand, within AO353_09155 at 2010.985 kb on - strand, within AO353_09155 at 2010.985 kb on - strand, within AO353_09155 at 2011.000 kb on + strand, within AO353_09155 at 2011.001 kb on - strand, within AO353_09155 at 2011.050 kb on + strand, within AO353_09155 at 2011.065 kb on + strand, within AO353_09155 at 2011.110 kb on + strand, within AO353_09155 at 2011.111 kb on - strand, within AO353_09155 at 2011.111 kb on - strand, within AO353_09155 at 2011.127 kb on + strand, within AO353_09155 at 2011.127 kb on + strand, within AO353_09155 at 2011.127 kb on + strand, within AO353_09155 at 2011.127 kb on + strand, within AO353_09155 at 2011.127 kb on + strand, within AO353_09155 at 2011.127 kb on + strand, within AO353_09155 at 2011.128 kb on - strand, within AO353_09155 at 2011.128 kb on - strand, within AO353_09155 at 2011.128 kb on - strand, within AO353_09155 at 2011.128 kb on - strand, within AO353_09155 at 2011.128 kb on - strand, within AO353_09155 at 2011.131 kb on + strand, within AO353_09155 at 2011.131 kb on + strand, within AO353_09155 at 2011.131 kb on + strand, within AO353_09155 at 2011.207 kb on + strand, within AO353_09155 at 2011.208 kb on - strand, within AO353_09155 at 2011.537 kb on - strand, within AO353_09155
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 2,010,170 - -0.5 2,010,170 - -1.2 2,010,170 - +1.9 2,010,249 - -0.0 2,010,265 + -1.2 2,010,533 + AO353_09150 0.81 +0.8 2,010,534 - AO353_09150 0.81 -1.8 2,010,534 - AO353_09150 0.81 -0.6 2,010,534 - AO353_09150 0.81 -1.3 2,010,534 - AO353_09150 0.81 -0.7 2,010,534 - AO353_09150 0.81 -0.4 2,010,641 - -1.0 2,010,641 - -0.6 2,010,859 - AO353_09155 0.22 -1.7 2,010,927 - AO353_09155 0.27 +1.6 2,010,984 + AO353_09155 0.32 -0.6 2,010,984 + AO353_09155 0.32 +0.1 2,010,984 + AO353_09155 0.32 -1.4 2,010,984 + AO353_09155 0.32 -0.5 2,010,984 + AO353_09155 0.32 +2.0 2,010,984 + AO353_09155 0.32 -0.5 2,010,984 + AO353_09155 0.32 +0.6 2,010,984 + AO353_09155 0.32 -0.1 2,010,985 - AO353_09155 0.32 -0.6 2,010,985 - AO353_09155 0.32 +0.8 2,010,985 - AO353_09155 0.32 +0.2 2,010,985 - AO353_09155 0.32 -2.3 2,011,000 + AO353_09155 0.33 +0.8 2,011,001 - AO353_09155 0.33 +0.8 2,011,050 + AO353_09155 0.37 -0.5 2,011,065 + AO353_09155 0.38 +0.3 2,011,110 + AO353_09155 0.41 +0.5 2,011,111 - AO353_09155 0.41 -0.3 2,011,111 - AO353_09155 0.41 -0.7 2,011,127 + AO353_09155 0.43 -0.5 2,011,127 + AO353_09155 0.43 -0.0 2,011,127 + AO353_09155 0.43 -0.6 2,011,127 + AO353_09155 0.43 -0.2 2,011,127 + AO353_09155 0.43 +1.3 2,011,127 + AO353_09155 0.43 +1.2 2,011,128 - AO353_09155 0.43 +0.7 2,011,128 - AO353_09155 0.43 -0.7 2,011,128 - AO353_09155 0.43 +0.1 2,011,128 - AO353_09155 0.43 +0.1 2,011,128 - AO353_09155 0.43 -0.7 2,011,131 + AO353_09155 0.43 +0.6 2,011,131 + AO353_09155 0.43 -0.7 2,011,131 + AO353_09155 0.43 -0.7 2,011,207 + AO353_09155 0.49 -0.2 2,011,208 - AO353_09155 0.49 +0.3 2,011,537 - AO353_09155 0.74 +1.4
Or see this region's nucleotide sequence