Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08340 and AO353_08345 are separated by 278 nucleotides AO353_08345 and AO353_08350 are separated by 102 nucleotides
AO353_08340: AO353_08340 - hypothetical protein, at 1,831,344 to 1,833,077
_08340
AO353_08345: AO353_08345 - dihydroxy-acid dehydratase, at 1,833,356 to 1,835,197
_08345
AO353_08350: AO353_08350 - hypothetical protein, at 1,835,300 to 1,836,526
_08350
Position (kb)
1833
1834
1835
1836 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1832.402 kb on + strand, within AO353_08340 at 1832.403 kb on - strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.506 kb on + strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.507 kb on - strand, within AO353_08340 at 1832.514 kb on + strand, within AO353_08340 at 1832.514 kb on + strand, within AO353_08340 at 1832.656 kb on + strand, within AO353_08340 at 1832.657 kb on - strand, within AO353_08340 at 1832.705 kb on - strand, within AO353_08340 at 1832.761 kb on + strand, within AO353_08340 at 1832.761 kb on + strand, within AO353_08340 at 1832.761 kb on + strand, within AO353_08340 at 1832.761 kb on + strand, within AO353_08340 at 1832.761 kb on + strand, within AO353_08340 at 1832.761 kb on + strand, within AO353_08340 at 1832.761 kb on + strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.762 kb on - strand, within AO353_08340 at 1832.852 kb on + strand, within AO353_08340 at 1832.882 kb on + strand, within AO353_08340 at 1832.882 kb on + strand, within AO353_08340 at 1832.883 kb on - strand, within AO353_08340 at 1832.992 kb on + strand at 1832.992 kb on + strand at 1833.007 kb on + strand at 1833.007 kb on + strand at 1833.008 kb on - strand at 1833.008 kb on - strand at 1833.015 kb on + strand at 1833.015 kb on + strand at 1833.015 kb on + strand at 1833.015 kb on + strand at 1833.016 kb on - strand at 1833.046 kb on + strand at 1833.121 kb on + strand at 1833.144 kb on + strand at 1833.145 kb on - strand at 1833.145 kb on - strand at 1833.145 kb on - strand at 1833.145 kb on - strand at 1833.176 kb on + strand at 1833.176 kb on + strand at 1833.177 kb on - strand at 1833.217 kb on + strand at 1833.217 kb on + strand at 1833.218 kb on - strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.307 kb on + strand at 1833.308 kb on - strand at 1833.308 kb on - strand at 1833.308 kb on - strand at 1833.308 kb on - strand at 1833.308 kb on - strand at 1833.308 kb on - strand at 1833.329 kb on + strand at 1833.329 kb on + strand at 1833.330 kb on - strand at 1833.629 kb on + strand, within AO353_08345 at 1833.629 kb on + strand, within AO353_08345 at 1833.630 kb on - strand, within AO353_08345 at 1833.630 kb on - strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.671 kb on + strand, within AO353_08345 at 1833.672 kb on - strand, within AO353_08345 at 1833.672 kb on - strand, within AO353_08345 at 1833.672 kb on - strand, within AO353_08345 at 1833.672 kb on - strand, within AO353_08345 at 1833.672 kb on - strand, within AO353_08345 at 1833.672 kb on - strand, within AO353_08345 at 1833.672 kb on - strand, within AO353_08345 at 1833.672 kb on - strand, within AO353_08345 at 1833.900 kb on - strand, within AO353_08345 at 1834.085 kb on + strand, within AO353_08345 at 1834.085 kb on + strand, within AO353_08345 at 1834.086 kb on - strand, within AO353_08345 at 1834.089 kb on - strand, within AO353_08345 at 1834.089 kb on - strand, within AO353_08345 at 1834.310 kb on + strand, within AO353_08345 at 1834.310 kb on + strand, within AO353_08345 at 1834.310 kb on + strand, within AO353_08345 at 1834.310 kb on + strand, within AO353_08345 at 1834.311 kb on - strand, within AO353_08345 at 1834.311 kb on - strand, within AO353_08345 at 1834.311 kb on - strand, within AO353_08345 at 1834.311 kb on - strand, within AO353_08345 at 1834.429 kb on + strand, within AO353_08345 at 1834.429 kb on + strand, within AO353_08345 at 1834.429 kb on + strand, within AO353_08345 at 1834.429 kb on + strand, within AO353_08345 at 1834.595 kb on + strand, within AO353_08345 at 1834.595 kb on + strand, within AO353_08345 at 1834.596 kb on - strand, within AO353_08345 at 1834.596 kb on - strand, within AO353_08345 at 1834.829 kb on + strand, within AO353_08345 at 1834.841 kb on + strand, within AO353_08345 at 1834.841 kb on + strand, within AO353_08345 at 1834.842 kb on - strand, within AO353_08345 at 1834.989 kb on + strand, within AO353_08345 at 1834.989 kb on + strand, within AO353_08345 at 1834.989 kb on + strand, within AO353_08345 at 1834.989 kb on + strand, within AO353_08345 at 1834.990 kb on - strand, within AO353_08345 at 1834.990 kb on - strand, within AO353_08345 at 1835.104 kb on + strand at 1835.104 kb on + strand at 1835.104 kb on + strand at 1835.104 kb on + strand at 1835.104 kb on + strand at 1835.104 kb on + strand at 1835.104 kb on + strand at 1835.104 kb on + strand at 1835.105 kb on - strand at 1835.105 kb on - strand at 1835.105 kb on - strand at 1835.105 kb on - strand at 1835.105 kb on - strand at 1835.105 kb on - strand at 1835.105 kb on - strand at 1835.129 kb on + strand at 1835.129 kb on + strand at 1835.130 kb on - strand at 1835.130 kb on - strand at 1835.166 kb on + strand at 1835.166 kb on + strand at 1835.166 kb on + strand at 1835.166 kb on + strand at 1835.166 kb on + strand at 1835.166 kb on + strand at 1835.166 kb on + strand at 1835.167 kb on - strand at 1835.167 kb on - strand at 1835.167 kb on - strand at 1835.167 kb on - strand at 1835.167 kb on - strand at 1835.167 kb on - strand at 1835.167 kb on - strand at 1835.167 kb on - strand at 1835.167 kb on - strand at 1835.167 kb on - strand at 1835.170 kb on + strand at 1835.170 kb on + strand at 1835.170 kb on + strand at 1835.170 kb on + strand at 1835.170 kb on + strand at 1835.171 kb on - strand at 1835.171 kb on - strand at 1835.171 kb on - strand at 1835.171 kb on - strand at 1835.195 kb on + strand at 1835.195 kb on + strand at 1835.195 kb on + strand at 1835.195 kb on + strand at 1835.196 kb on - strand at 1835.275 kb on + strand at 1835.276 kb on - strand at 1835.276 kb on - strand at 1835.276 kb on - strand at 1835.340 kb on + strand at 1835.341 kb on - strand at 1835.429 kb on - strand, within AO353_08350 at 1835.429 kb on - strand, within AO353_08350 at 1835.510 kb on - strand, within AO353_08350 at 1835.510 kb on - strand, within AO353_08350 at 1835.617 kb on + strand, within AO353_08350 at 1835.618 kb on - strand, within AO353_08350 at 1835.655 kb on + strand, within AO353_08350 at 1835.655 kb on + strand, within AO353_08350 at 1835.655 kb on + strand, within AO353_08350 at 1835.655 kb on + strand, within AO353_08350 at 1835.656 kb on - strand, within AO353_08350 at 1835.656 kb on - strand, within AO353_08350 at 1835.808 kb on + strand, within AO353_08350 at 1835.808 kb on + strand, within AO353_08350 at 1835.808 kb on + strand, within AO353_08350 at 1835.808 kb on + strand, within AO353_08350 at 1835.808 kb on + strand, within AO353_08350 at 1835.809 kb on - strand, within AO353_08350 at 1835.809 kb on - strand, within AO353_08350 at 1835.809 kb on - strand, within AO353_08350 at 1835.839 kb on + strand, within AO353_08350 at 1836.012 kb on + strand, within AO353_08350 at 1836.031 kb on - strand, within AO353_08350 at 1836.099 kb on + strand at 1836.099 kb on + strand, within AO353_08350 at 1836.099 kb on + strand, within AO353_08350 at 1836.099 kb on + strand, within AO353_08350 at 1836.099 kb on + strand, within AO353_08350 at 1836.100 kb on - strand, within AO353_08350 at 1836.100 kb on - strand, within AO353_08350 at 1836.100 kb on - strand, within AO353_08350 at 1836.121 kb on + strand, within AO353_08350 at 1836.121 kb on + strand, within AO353_08350 at 1836.121 kb on + strand, within AO353_08350 at 1836.121 kb on + strand, within AO353_08350 at 1836.122 kb on - strand, within AO353_08350 at 1836.122 kb on - strand, within AO353_08350 at 1836.122 kb on - strand, within AO353_08350 at 1836.122 kb on - strand, within AO353_08350 at 1836.122 kb on - strand, within AO353_08350 at 1836.133 kb on + strand, within AO353_08350 at 1836.134 kb on - strand, within AO353_08350 at 1836.189 kb on + strand, within AO353_08350 at 1836.189 kb on + strand, within AO353_08350
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,832,402 + AO353_08340 0.61 +0.5 1,832,403 - AO353_08340 0.61 -1.8 1,832,506 + AO353_08340 0.67 +0.3 1,832,506 + AO353_08340 0.67 +0.1 1,832,506 + AO353_08340 0.67 +1.1 1,832,506 + AO353_08340 0.67 -1.1 1,832,506 + AO353_08340 0.67 +1.1 1,832,506 + AO353_08340 0.67 +0.5 1,832,506 + AO353_08340 0.67 -1.9 1,832,506 + AO353_08340 0.67 +0.3 1,832,506 + AO353_08340 0.67 +1.0 1,832,506 + AO353_08340 0.67 -0.8 1,832,506 + AO353_08340 0.67 -1.1 1,832,507 - AO353_08340 0.67 +1.1 1,832,507 - AO353_08340 0.67 -0.1 1,832,507 - AO353_08340 0.67 -0.5 1,832,507 - AO353_08340 0.67 +0.1 1,832,507 - AO353_08340 0.67 -0.8 1,832,507 - AO353_08340 0.67 -0.1 1,832,507 - AO353_08340 0.67 -0.8 1,832,507 - AO353_08340 0.67 +1.3 1,832,507 - AO353_08340 0.67 -1.3 1,832,507 - AO353_08340 0.67 -0.7 1,832,507 - AO353_08340 0.67 +0.1 1,832,507 - AO353_08340 0.67 +0.1 1,832,507 - AO353_08340 0.67 +0.0 1,832,507 - AO353_08340 0.67 -2.6 1,832,507 - AO353_08340 0.67 +1.1 1,832,514 + AO353_08340 0.67 -0.6 1,832,514 + AO353_08340 0.67 -0.1 1,832,656 + AO353_08340 0.76 -0.1 1,832,657 - AO353_08340 0.76 +0.9 1,832,705 - AO353_08340 0.78 +0.4 1,832,761 + AO353_08340 0.82 -0.9 1,832,761 + AO353_08340 0.82 -1.2 1,832,761 + AO353_08340 0.82 +0.4 1,832,761 + AO353_08340 0.82 +0.9 1,832,761 + AO353_08340 0.82 +0.3 1,832,761 + AO353_08340 0.82 -0.2 1,832,761 + AO353_08340 0.82 -0.3 1,832,762 - AO353_08340 0.82 +0.5 1,832,762 - AO353_08340 0.82 +1.0 1,832,762 - AO353_08340 0.82 +0.0 1,832,762 - AO353_08340 0.82 -0.5 1,832,762 - AO353_08340 0.82 -0.4 1,832,762 - AO353_08340 0.82 +0.0 1,832,762 - AO353_08340 0.82 -0.2 1,832,762 - AO353_08340 0.82 +1.4 1,832,762 - AO353_08340 0.82 -1.3 1,832,762 - AO353_08340 0.82 -0.1 1,832,852 + AO353_08340 0.87 -0.1 1,832,882 + AO353_08340 0.89 -1.5 1,832,882 + AO353_08340 0.89 -0.2 1,832,883 - AO353_08340 0.89 -0.5 1,832,992 + -1.1 1,832,992 + +1.1 1,833,007 + -1.9 1,833,007 + -0.1 1,833,008 - +0.2 1,833,008 - +1.5 1,833,015 + +0.3 1,833,015 + +0.5 1,833,015 + +0.5 1,833,015 + +0.2 1,833,016 - -0.4 1,833,046 + +0.2 1,833,121 + -0.8 1,833,144 + -0.2 1,833,145 - -1.2 1,833,145 - +0.1 1,833,145 - +0.5 1,833,145 - +0.7 1,833,176 + +0.7 1,833,176 + -2.1 1,833,177 - -1.0 1,833,217 + +1.2 1,833,217 + -0.7 1,833,218 - -1.0 1,833,307 + -0.4 1,833,307 + +0.9 1,833,307 + +0.9 1,833,307 + -0.3 1,833,307 + +0.9 1,833,307 + -1.6 1,833,307 + -0.5 1,833,307 + +1.5 1,833,307 + -0.4 1,833,307 + +0.1 1,833,307 + -0.6 1,833,307 + -0.6 1,833,307 + -2.2 1,833,308 - -1.9 1,833,308 - -0.1 1,833,308 - -0.6 1,833,308 - +1.5 1,833,308 - -1.2 1,833,308 - +0.0 1,833,329 + +0.8 1,833,329 + -0.4 1,833,330 - -1.2 1,833,629 + AO353_08345 0.15 -1.1 1,833,629 + AO353_08345 0.15 -0.6 1,833,630 - AO353_08345 0.15 -0.3 1,833,630 - AO353_08345 0.15 -0.1 1,833,671 + AO353_08345 0.17 -0.1 1,833,671 + AO353_08345 0.17 -1.5 1,833,671 + AO353_08345 0.17 -1.2 1,833,671 + AO353_08345 0.17 -0.3 1,833,671 + AO353_08345 0.17 -2.1 1,833,671 + AO353_08345 0.17 -0.6 1,833,671 + AO353_08345 0.17 -0.8 1,833,671 + AO353_08345 0.17 -2.7 1,833,671 + AO353_08345 0.17 +0.2 1,833,671 + AO353_08345 0.17 -0.6 1,833,671 + AO353_08345 0.17 -0.9 1,833,672 - AO353_08345 0.17 -1.8 1,833,672 - AO353_08345 0.17 -1.6 1,833,672 - AO353_08345 0.17 -0.1 1,833,672 - AO353_08345 0.17 -1.5 1,833,672 - AO353_08345 0.17 -0.8 1,833,672 - AO353_08345 0.17 -2.2 1,833,672 - AO353_08345 0.17 -1.1 1,833,672 - AO353_08345 0.17 -1.3 1,833,900 - AO353_08345 0.30 -2.9 1,834,085 + AO353_08345 0.40 -1.6 1,834,085 + AO353_08345 0.40 +1.9 1,834,086 - AO353_08345 0.40 -0.8 1,834,089 - AO353_08345 0.40 -0.1 1,834,089 - AO353_08345 0.40 -0.3 1,834,310 + AO353_08345 0.52 -0.5 1,834,310 + AO353_08345 0.52 -0.9 1,834,310 + AO353_08345 0.52 -1.6 1,834,310 + AO353_08345 0.52 -0.9 1,834,311 - AO353_08345 0.52 -1.6 1,834,311 - AO353_08345 0.52 -0.3 1,834,311 - AO353_08345 0.52 -1.2 1,834,311 - AO353_08345 0.52 -1.6 1,834,429 + AO353_08345 0.58 +1.5 1,834,429 + AO353_08345 0.58 -1.9 1,834,429 + AO353_08345 0.58 -1.7 1,834,429 + AO353_08345 0.58 +0.5 1,834,595 + AO353_08345 0.67 -2.3 1,834,595 + AO353_08345 0.67 -1.4 1,834,596 - AO353_08345 0.67 -2.5 1,834,596 - AO353_08345 0.67 -0.6 1,834,829 + AO353_08345 0.80 -0.1 1,834,841 + AO353_08345 0.81 -1.2 1,834,841 + AO353_08345 0.81 -1.7 1,834,842 - AO353_08345 0.81 -1.8 1,834,989 + AO353_08345 0.89 -2.1 1,834,989 + AO353_08345 0.89 -1.9 1,834,989 + AO353_08345 0.89 -1.9 1,834,989 + AO353_08345 0.89 +0.5 1,834,990 - AO353_08345 0.89 -0.1 1,834,990 - AO353_08345 0.89 -1.7 1,835,104 + -0.3 1,835,104 + -0.9 1,835,104 + -1.3 1,835,104 + -0.9 1,835,104 + -0.8 1,835,104 + -3.3 1,835,104 + -1.3 1,835,104 + -0.1 1,835,105 - +0.9 1,835,105 - -0.1 1,835,105 - +0.2 1,835,105 - -2.2 1,835,105 - -1.2 1,835,105 - -0.1 1,835,105 - -0.6 1,835,129 + +0.5 1,835,129 + -2.1 1,835,130 - -1.3 1,835,130 - -0.5 1,835,166 + -0.6 1,835,166 + -0.5 1,835,166 + -1.4 1,835,166 + -0.3 1,835,166 + -2.2 1,835,166 + -0.3 1,835,166 + +0.2 1,835,167 - -2.4 1,835,167 - -1.1 1,835,167 - -1.1 1,835,167 - +0.9 1,835,167 - -1.2 1,835,167 - -2.3 1,835,167 - -0.3 1,835,167 - -1.2 1,835,167 - -2.6 1,835,167 - +1.5 1,835,170 + -0.3 1,835,170 + +0.1 1,835,170 + -0.8 1,835,170 + -0.7 1,835,170 + +0.4 1,835,171 - -0.8 1,835,171 - -0.1 1,835,171 - +0.7 1,835,171 - -0.3 1,835,195 + -0.9 1,835,195 + -0.4 1,835,195 + +1.1 1,835,195 + -0.1 1,835,196 - +0.0 1,835,275 + +0.2 1,835,276 - +0.4 1,835,276 - +0.5 1,835,276 - +0.5 1,835,340 + +0.1 1,835,341 - -1.8 1,835,429 - AO353_08350 0.11 -1.3 1,835,429 - AO353_08350 0.11 -1.3 1,835,510 - AO353_08350 0.17 -1.3 1,835,510 - AO353_08350 0.17 -0.6 1,835,617 + AO353_08350 0.26 -0.1 1,835,618 - AO353_08350 0.26 +0.9 1,835,655 + AO353_08350 0.29 +1.5 1,835,655 + AO353_08350 0.29 +1.5 1,835,655 + AO353_08350 0.29 -1.5 1,835,655 + AO353_08350 0.29 +0.5 1,835,656 - AO353_08350 0.29 +0.9 1,835,656 - AO353_08350 0.29 -0.4 1,835,808 + AO353_08350 0.41 -0.8 1,835,808 + AO353_08350 0.41 +0.1 1,835,808 + AO353_08350 0.41 -0.1 1,835,808 + AO353_08350 0.41 -0.7 1,835,808 + AO353_08350 0.41 -0.5 1,835,809 - AO353_08350 0.41 +1.5 1,835,809 - AO353_08350 0.41 +0.5 1,835,809 - AO353_08350 0.41 -0.2 1,835,839 + AO353_08350 0.44 -0.1 1,836,012 + AO353_08350 0.58 +0.2 1,836,031 - AO353_08350 0.60 +0.3 1,836,099 + +2.5 1,836,099 + AO353_08350 0.65 +0.4 1,836,099 + AO353_08350 0.65 -1.1 1,836,099 + AO353_08350 0.65 -0.4 1,836,099 + AO353_08350 0.65 -0.7 1,836,100 - AO353_08350 0.65 +0.3 1,836,100 - AO353_08350 0.65 +0.2 1,836,100 - AO353_08350 0.65 -2.8 1,836,121 + AO353_08350 0.67 -0.3 1,836,121 + AO353_08350 0.67 -0.1 1,836,121 + AO353_08350 0.67 -0.3 1,836,121 + AO353_08350 0.67 +0.5 1,836,122 - AO353_08350 0.67 -0.3 1,836,122 - AO353_08350 0.67 +0.7 1,836,122 - AO353_08350 0.67 -1.7 1,836,122 - AO353_08350 0.67 -1.2 1,836,122 - AO353_08350 0.67 -0.8 1,836,133 + AO353_08350 0.68 +0.7 1,836,134 - AO353_08350 0.68 +0.4 1,836,189 + AO353_08350 0.72 -1.1 1,836,189 + AO353_08350 0.72 +0.2
Or see this region's nucleotide sequence