Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07650 and AO353_07655 overlap by 4 nucleotides AO353_07655 and AO353_07660 are separated by 14 nucleotides
AO353_07650: AO353_07650 - sarcosine oxidase subunit alpha, at 1,683,124 to 1,686,141
_07650
AO353_07655: AO353_07655 - sarcosine oxidase subunit delta, at 1,686,138 to 1,686,467
_07655
AO353_07660: AO353_07660 - sarcosine oxidase (5,10-methylenetetrahydrofolate-forming), beta subunit (EC 1.5.3.24) (from data) , at 1,686,482 to 1,687,732
_07660
Position (kb)
1686
1687 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1685.177 kb on - strand, within AO353_07650 at 1685.177 kb on - strand, within AO353_07650 at 1685.177 kb on - strand, within AO353_07650 at 1685.195 kb on + strand, within AO353_07650 at 1685.195 kb on + strand, within AO353_07650 at 1685.195 kb on + strand, within AO353_07650 at 1685.196 kb on - strand, within AO353_07650 at 1685.196 kb on - strand, within AO353_07650 at 1685.196 kb on - strand, within AO353_07650 at 1685.196 kb on - strand, within AO353_07650 at 1685.196 kb on - strand, within AO353_07650 at 1685.284 kb on + strand, within AO353_07650 at 1685.284 kb on + strand, within AO353_07650 at 1685.645 kb on + strand, within AO353_07650 at 1685.645 kb on + strand, within AO353_07650 at 1685.645 kb on + strand, within AO353_07650 at 1685.645 kb on + strand, within AO353_07650 at 1685.645 kb on + strand, within AO353_07650 at 1685.645 kb on + strand, within AO353_07650 at 1685.646 kb on - strand, within AO353_07650 at 1685.646 kb on - strand, within AO353_07650 at 1685.646 kb on - strand, within AO353_07650 at 1685.646 kb on - strand, within AO353_07650 at 1685.646 kb on - strand, within AO353_07650 at 1685.646 kb on - strand, within AO353_07650 at 1685.646 kb on - strand, within AO353_07650 at 1685.651 kb on + strand, within AO353_07650 at 1685.651 kb on + strand, within AO353_07650 at 1685.651 kb on + strand, within AO353_07650 at 1685.651 kb on + strand, within AO353_07650 at 1685.651 kb on + strand, within AO353_07650 at 1685.651 kb on + strand, within AO353_07650 at 1685.651 kb on + strand, within AO353_07650 at 1685.651 kb on + strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.652 kb on - strand, within AO353_07650 at 1685.700 kb on + strand, within AO353_07650 at 1685.701 kb on - strand, within AO353_07650 at 1685.701 kb on - strand, within AO353_07650 at 1685.708 kb on + strand, within AO353_07650 at 1685.708 kb on + strand, within AO353_07650 at 1685.708 kb on + strand, within AO353_07650 at 1685.708 kb on + strand, within AO353_07650 at 1685.708 kb on + strand, within AO353_07650 at 1685.708 kb on + strand, within AO353_07650 at 1685.708 kb on + strand, within AO353_07650 at 1685.708 kb on + strand, within AO353_07650 at 1685.709 kb on - strand, within AO353_07650 at 1685.709 kb on - strand, within AO353_07650 at 1685.709 kb on - strand, within AO353_07650 at 1685.709 kb on - strand, within AO353_07650 at 1685.709 kb on - strand, within AO353_07650 at 1685.709 kb on - strand, within AO353_07650 at 1685.709 kb on - strand, within AO353_07650 at 1685.717 kb on + strand, within AO353_07650 at 1685.717 kb on + strand, within AO353_07650 at 1685.717 kb on + strand, within AO353_07650 at 1685.717 kb on + strand, within AO353_07650 at 1685.718 kb on - strand, within AO353_07650 at 1685.741 kb on + strand, within AO353_07650 at 1685.741 kb on + strand, within AO353_07650 at 1685.756 kb on + strand, within AO353_07650 at 1685.756 kb on + strand, within AO353_07650 at 1685.756 kb on + strand, within AO353_07650 at 1685.756 kb on + strand, within AO353_07650 at 1685.757 kb on - strand, within AO353_07650 at 1685.757 kb on - strand, within AO353_07650 at 1685.821 kb on + strand, within AO353_07650 at 1685.822 kb on - strand, within AO353_07650 at 1685.847 kb on + strand at 1685.864 kb on + strand at 1685.864 kb on + strand at 1685.865 kb on - strand at 1685.893 kb on - strand at 1685.981 kb on + strand at 1685.982 kb on - strand at 1685.982 kb on - strand at 1685.982 kb on - strand at 1686.059 kb on + strand at 1686.059 kb on + strand at 1686.059 kb on + strand at 1686.059 kb on + strand at 1686.060 kb on - strand at 1686.060 kb on - strand at 1686.060 kb on - strand at 1686.060 kb on - strand at 1686.141 kb on + strand at 1686.142 kb on - strand at 1686.142 kb on - strand at 1686.142 kb on - strand at 1686.142 kb on - strand at 1686.142 kb on - strand at 1686.142 kb on - strand at 1686.220 kb on + strand, within AO353_07655 at 1686.220 kb on + strand, within AO353_07655 at 1686.220 kb on + strand, within AO353_07655 at 1686.221 kb on - strand, within AO353_07655 at 1686.221 kb on - strand, within AO353_07655 at 1686.238 kb on + strand, within AO353_07655 at 1686.238 kb on + strand, within AO353_07655 at 1686.238 kb on + strand, within AO353_07655 at 1686.238 kb on + strand, within AO353_07655 at 1686.238 kb on + strand, within AO353_07655 at 1686.238 kb on + strand, within AO353_07655 at 1686.239 kb on - strand, within AO353_07655 at 1686.239 kb on - strand, within AO353_07655 at 1686.268 kb on + strand, within AO353_07655 at 1686.268 kb on + strand, within AO353_07655 at 1686.268 kb on + strand, within AO353_07655 at 1686.268 kb on + strand, within AO353_07655 at 1686.269 kb on - strand, within AO353_07655 at 1686.269 kb on - strand, within AO353_07655 at 1686.324 kb on - strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.340 kb on + strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.341 kb on - strand, within AO353_07655 at 1686.467 kb on + strand at 1686.467 kb on + strand at 1686.467 kb on + strand at 1686.467 kb on + strand at 1686.467 kb on + strand at 1686.467 kb on + strand at 1686.467 kb on + strand at 1686.468 kb on - strand at 1686.468 kb on - strand at 1686.468 kb on - strand at 1686.468 kb on - strand at 1686.468 kb on - strand at 1686.468 kb on - strand at 1686.483 kb on + strand at 1686.842 kb on - strand, within AO353_07660 at 1686.885 kb on + strand, within AO353_07660 at 1686.885 kb on + strand, within AO353_07660 at 1686.885 kb on + strand, within AO353_07660 at 1686.885 kb on + strand, within AO353_07660 at 1686.885 kb on + strand, within AO353_07660 at 1686.886 kb on - strand, within AO353_07660 at 1686.886 kb on - strand, within AO353_07660 at 1686.886 kb on - strand, within AO353_07660 at 1686.886 kb on - strand, within AO353_07660 at 1686.894 kb on - strand, within AO353_07660 at 1687.082 kb on + strand, within AO353_07660 at 1687.082 kb on + strand, within AO353_07660 at 1687.082 kb on + strand, within AO353_07660 at 1687.083 kb on - strand, within AO353_07660 at 1687.083 kb on - strand, within AO353_07660 at 1687.377 kb on + strand, within AO353_07660 at 1687.377 kb on + strand, within AO353_07660 at 1687.377 kb on + strand, within AO353_07660 at 1687.378 kb on - strand, within AO353_07660 at 1687.378 kb on - strand, within AO353_07660 at 1687.407 kb on + strand, within AO353_07660 at 1687.407 kb on + strand, within AO353_07660 at 1687.407 kb on + strand, within AO353_07660 at 1687.407 kb on + strand, within AO353_07660 at 1687.408 kb on - strand, within AO353_07660 at 1687.408 kb on - strand, within AO353_07660 at 1687.408 kb on - strand, within AO353_07660 at 1687.408 kb on - strand, within AO353_07660 at 1687.408 kb on - strand, within AO353_07660 at 1687.408 kb on - strand, within AO353_07660 at 1687.408 kb on - strand, within AO353_07660 at 1687.408 kb on - strand, within AO353_07660 at 1687.455 kb on + strand, within AO353_07660 at 1687.456 kb on - strand, within AO353_07660 at 1687.456 kb on - strand, within AO353_07660
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,685,177 - AO353_07650 0.68 +0.1 1,685,177 - AO353_07650 0.68 +0.7 1,685,177 - AO353_07650 0.68 +0.3 1,685,195 + AO353_07650 0.69 -0.1 1,685,195 + AO353_07650 0.69 -0.1 1,685,195 + AO353_07650 0.69 +0.7 1,685,196 - AO353_07650 0.69 -0.9 1,685,196 - AO353_07650 0.69 +1.5 1,685,196 - AO353_07650 0.69 -1.4 1,685,196 - AO353_07650 0.69 -2.2 1,685,196 - AO353_07650 0.69 +0.5 1,685,284 + AO353_07650 0.72 +0.5 1,685,284 + AO353_07650 0.72 -1.9 1,685,645 + AO353_07650 0.84 -0.0 1,685,645 + AO353_07650 0.84 +0.5 1,685,645 + AO353_07650 0.84 +0.5 1,685,645 + AO353_07650 0.84 -0.2 1,685,645 + AO353_07650 0.84 -1.2 1,685,645 + AO353_07650 0.84 -1.5 1,685,646 - AO353_07650 0.84 +2.1 1,685,646 - AO353_07650 0.84 -1.0 1,685,646 - AO353_07650 0.84 -0.7 1,685,646 - AO353_07650 0.84 +0.6 1,685,646 - AO353_07650 0.84 -0.4 1,685,646 - AO353_07650 0.84 +0.5 1,685,646 - AO353_07650 0.84 -1.8 1,685,651 + AO353_07650 0.84 -0.7 1,685,651 + AO353_07650 0.84 -0.4 1,685,651 + AO353_07650 0.84 +1.9 1,685,651 + AO353_07650 0.84 -0.4 1,685,651 + AO353_07650 0.84 -0.1 1,685,651 + AO353_07650 0.84 +1.1 1,685,651 + AO353_07650 0.84 -0.2 1,685,651 + AO353_07650 0.84 -1.8 1,685,652 - AO353_07650 0.84 -0.1 1,685,652 - AO353_07650 0.84 +0.8 1,685,652 - AO353_07650 0.84 +0.2 1,685,652 - AO353_07650 0.84 +0.9 1,685,652 - AO353_07650 0.84 -1.9 1,685,652 - AO353_07650 0.84 -0.2 1,685,652 - AO353_07650 0.84 +0.5 1,685,652 - AO353_07650 0.84 +0.2 1,685,652 - AO353_07650 0.84 +1.1 1,685,652 - AO353_07650 0.84 -0.1 1,685,700 + AO353_07650 0.85 +1.3 1,685,701 - AO353_07650 0.85 -0.5 1,685,701 - AO353_07650 0.85 -0.1 1,685,708 + AO353_07650 0.86 +0.5 1,685,708 + AO353_07650 0.86 +0.1 1,685,708 + AO353_07650 0.86 -0.2 1,685,708 + AO353_07650 0.86 -0.9 1,685,708 + AO353_07650 0.86 +1.0 1,685,708 + AO353_07650 0.86 +0.5 1,685,708 + AO353_07650 0.86 -0.6 1,685,708 + AO353_07650 0.86 +0.4 1,685,709 - AO353_07650 0.86 +0.1 1,685,709 - AO353_07650 0.86 -0.3 1,685,709 - AO353_07650 0.86 -0.5 1,685,709 - AO353_07650 0.86 -2.1 1,685,709 - AO353_07650 0.86 -0.1 1,685,709 - AO353_07650 0.86 +0.7 1,685,709 - AO353_07650 0.86 -1.2 1,685,717 + AO353_07650 0.86 -0.3 1,685,717 + AO353_07650 0.86 +1.1 1,685,717 + AO353_07650 0.86 -0.9 1,685,717 + AO353_07650 0.86 +0.6 1,685,718 - AO353_07650 0.86 -1.4 1,685,741 + AO353_07650 0.87 -0.7 1,685,741 + AO353_07650 0.87 +0.1 1,685,756 + AO353_07650 0.87 -0.1 1,685,756 + AO353_07650 0.87 +0.3 1,685,756 + AO353_07650 0.87 -1.0 1,685,756 + AO353_07650 0.87 -0.1 1,685,757 - AO353_07650 0.87 +2.0 1,685,757 - AO353_07650 0.87 +0.2 1,685,821 + AO353_07650 0.89 +0.1 1,685,822 - AO353_07650 0.89 +0.6 1,685,847 + +0.4 1,685,864 + -1.1 1,685,864 + +2.9 1,685,865 - -0.7 1,685,893 - -0.1 1,685,981 + -0.9 1,685,982 - -0.1 1,685,982 - -0.7 1,685,982 - +0.7 1,686,059 + -0.1 1,686,059 + -0.8 1,686,059 + +2.1 1,686,059 + -0.3 1,686,060 - +1.2 1,686,060 - -1.2 1,686,060 - +0.5 1,686,060 - +0.2 1,686,141 + +0.0 1,686,142 - -1.1 1,686,142 - +0.9 1,686,142 - +0.6 1,686,142 - -0.5 1,686,142 - +0.9 1,686,142 - -0.7 1,686,220 + AO353_07655 0.25 +1.1 1,686,220 + AO353_07655 0.25 -0.3 1,686,220 + AO353_07655 0.25 +0.5 1,686,221 - AO353_07655 0.25 +0.3 1,686,221 - AO353_07655 0.25 +0.0 1,686,238 + AO353_07655 0.30 +1.7 1,686,238 + AO353_07655 0.30 +0.5 1,686,238 + AO353_07655 0.30 +1.0 1,686,238 + AO353_07655 0.30 +0.1 1,686,238 + AO353_07655 0.30 +1.0 1,686,238 + AO353_07655 0.30 -1.2 1,686,239 - AO353_07655 0.31 -0.1 1,686,239 - AO353_07655 0.31 +1.5 1,686,268 + AO353_07655 0.39 -0.1 1,686,268 + AO353_07655 0.39 -0.5 1,686,268 + AO353_07655 0.39 -0.1 1,686,268 + AO353_07655 0.39 +1.0 1,686,269 - AO353_07655 0.40 +0.2 1,686,269 - AO353_07655 0.40 -0.5 1,686,324 - AO353_07655 0.56 +0.4 1,686,340 + AO353_07655 0.61 -0.5 1,686,340 + AO353_07655 0.61 +1.9 1,686,340 + AO353_07655 0.61 +0.5 1,686,340 + AO353_07655 0.61 -0.5 1,686,340 + AO353_07655 0.61 +2.1 1,686,340 + AO353_07655 0.61 -0.1 1,686,340 + AO353_07655 0.61 -0.5 1,686,340 + AO353_07655 0.61 +1.1 1,686,340 + AO353_07655 0.61 +1.5 1,686,340 + AO353_07655 0.61 +0.0 1,686,340 + AO353_07655 0.61 +0.4 1,686,340 + AO353_07655 0.61 +0.0 1,686,340 + AO353_07655 0.61 -0.0 1,686,340 + AO353_07655 0.61 +0.7 1,686,340 + AO353_07655 0.61 +0.9 1,686,340 + AO353_07655 0.61 -0.9 1,686,340 + AO353_07655 0.61 +0.4 1,686,340 + AO353_07655 0.61 +1.1 1,686,340 + AO353_07655 0.61 +0.8 1,686,341 - AO353_07655 0.62 +0.9 1,686,341 - AO353_07655 0.62 -0.5 1,686,341 - AO353_07655 0.62 +1.1 1,686,341 - AO353_07655 0.62 -0.3 1,686,341 - AO353_07655 0.62 -0.5 1,686,341 - AO353_07655 0.62 +0.5 1,686,341 - AO353_07655 0.62 -0.2 1,686,341 - AO353_07655 0.62 -1.2 1,686,341 - AO353_07655 0.62 +1.0 1,686,341 - AO353_07655 0.62 -0.1 1,686,467 + -1.0 1,686,467 + +0.6 1,686,467 + -0.8 1,686,467 + +1.5 1,686,467 + -0.2 1,686,467 + -0.3 1,686,467 + -1.1 1,686,468 - +0.7 1,686,468 - +0.5 1,686,468 - +0.0 1,686,468 - +1.2 1,686,468 - +0.7 1,686,468 - +0.6 1,686,483 + -0.7 1,686,842 - AO353_07660 0.29 -0.7 1,686,885 + AO353_07660 0.32 +1.2 1,686,885 + AO353_07660 0.32 -0.6 1,686,885 + AO353_07660 0.32 -0.3 1,686,885 + AO353_07660 0.32 -0.5 1,686,885 + AO353_07660 0.32 +1.0 1,686,886 - AO353_07660 0.32 -0.3 1,686,886 - AO353_07660 0.32 -0.1 1,686,886 - AO353_07660 0.32 -1.3 1,686,886 - AO353_07660 0.32 -1.2 1,686,894 - AO353_07660 0.33 +0.3 1,687,082 + AO353_07660 0.48 -0.1 1,687,082 + AO353_07660 0.48 -0.6 1,687,082 + AO353_07660 0.48 -0.7 1,687,083 - AO353_07660 0.48 -0.7 1,687,083 - AO353_07660 0.48 -2.1 1,687,377 + AO353_07660 0.72 -0.3 1,687,377 + AO353_07660 0.72 -0.1 1,687,377 + AO353_07660 0.72 -0.9 1,687,378 - AO353_07660 0.72 -2.3 1,687,378 - AO353_07660 0.72 +0.7 1,687,407 + AO353_07660 0.74 -1.4 1,687,407 + AO353_07660 0.74 +1.6 1,687,407 + AO353_07660 0.74 +1.7 1,687,407 + AO353_07660 0.74 -0.5 1,687,408 - AO353_07660 0.74 -0.5 1,687,408 - AO353_07660 0.74 +1.9 1,687,408 - AO353_07660 0.74 -1.2 1,687,408 - AO353_07660 0.74 -0.2 1,687,408 - AO353_07660 0.74 -1.7 1,687,408 - AO353_07660 0.74 +1.1 1,687,408 - AO353_07660 0.74 -0.5 1,687,408 - AO353_07660 0.74 -0.3 1,687,455 + AO353_07660 0.78 +0.0 1,687,456 - AO353_07660 0.78 +1.8 1,687,456 - AO353_07660 0.78 +0.1
Or see this region's nucleotide sequence