Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07605 and AO353_07610 overlap by 42 nucleotides AO353_07610 and AO353_07615 are separated by 212 nucleotides AO353_07615 and AO353_07620 are separated by 224 nucleotides AO353_07620 and AO353_07625 are separated by 54 nucleotides
AO353_07605: AO353_07605 - acyltransferase, at 1,675,393 to 1,676,322
_07605
AO353_07610: AO353_07610 - hypothetical protein, at 1,676,281 to 1,676,844
_07610
AO353_07615: AO353_07615 - hypothetical protein, at 1,677,057 to 1,677,620
_07615
AO353_07620: AO353_07620 - fasciclin, at 1,677,845 to 1,678,438
_07620
AO353_07625: AO353_07625 - RNA polymerase subunit sigma-70, at 1,678,493 to 1,679,125
_07625
Position (kb)
1677
1678 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1676.065 kb on + strand, within AO353_07605 at 1676.246 kb on + strand at 1676.246 kb on + strand at 1676.246 kb on + strand at 1676.246 kb on + strand at 1676.246 kb on + strand at 1676.247 kb on - strand at 1676.247 kb on - strand at 1676.247 kb on - strand at 1676.247 kb on - strand at 1676.247 kb on - strand at 1676.313 kb on + strand at 1676.314 kb on - strand at 1676.320 kb on + strand at 1676.321 kb on - strand at 1676.579 kb on + strand, within AO353_07610 at 1676.580 kb on - strand, within AO353_07610 at 1677.127 kb on + strand, within AO353_07615 at 1677.127 kb on + strand, within AO353_07615 at 1677.127 kb on + strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.338 kb on + strand, within AO353_07615 at 1677.338 kb on + strand, within AO353_07615 at 1677.338 kb on + strand, within AO353_07615 at 1677.338 kb on + strand, within AO353_07615 at 1677.339 kb on - strand, within AO353_07615 at 1677.339 kb on - strand, within AO353_07615 at 1677.339 kb on - strand, within AO353_07615 at 1677.355 kb on + strand, within AO353_07615 at 1677.355 kb on + strand, within AO353_07615 at 1677.680 kb on + strand at 1677.681 kb on - strand at 1677.694 kb on - strand at 1677.696 kb on + strand at 1677.696 kb on + strand at 1677.696 kb on + strand at 1677.696 kb on + strand at 1677.696 kb on + strand at 1677.696 kb on + strand at 1677.696 kb on + strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.697 kb on - strand at 1677.742 kb on - strand at 1677.791 kb on + strand at 1677.791 kb on + strand at 1677.791 kb on + strand at 1677.791 kb on + strand at 1677.791 kb on + strand at 1677.791 kb on + strand at 1677.791 kb on + strand at 1677.791 kb on + strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.792 kb on - strand at 1677.794 kb on - strand at 1677.794 kb on - strand at 1677.832 kb on + strand at 1677.832 kb on + strand at 1677.832 kb on + strand at 1677.832 kb on + strand at 1677.833 kb on - strand at 1677.833 kb on - strand at 1677.833 kb on - strand at 1677.833 kb on - strand at 1677.833 kb on - strand at 1677.833 kb on - strand at 1677.856 kb on + strand at 1677.856 kb on + strand at 1677.857 kb on - strand at 1677.857 kb on - strand at 1677.857 kb on - strand at 1677.862 kb on + strand at 1677.863 kb on - strand at 1677.863 kb on - strand at 1677.863 kb on - strand at 1677.957 kb on + strand, within AO353_07620 at 1677.957 kb on + strand, within AO353_07620 at 1677.957 kb on + strand, within AO353_07620 at 1677.958 kb on - strand, within AO353_07620 at 1677.958 kb on - strand, within AO353_07620 at 1677.958 kb on - strand, within AO353_07620 at 1677.958 kb on - strand, within AO353_07620 at 1677.958 kb on - strand, within AO353_07620 at 1677.958 kb on - strand, within AO353_07620 at 1677.960 kb on + strand, within AO353_07620 at 1677.961 kb on - strand, within AO353_07620 at 1677.961 kb on - strand, within AO353_07620 at 1678.004 kb on - strand, within AO353_07620 at 1678.011 kb on + strand, within AO353_07620 at 1678.047 kb on + strand, within AO353_07620 at 1678.047 kb on + strand, within AO353_07620 at 1678.048 kb on - strand, within AO353_07620 at 1678.048 kb on - strand, within AO353_07620 at 1678.081 kb on + strand, within AO353_07620 at 1678.082 kb on - strand, within AO353_07620 at 1678.199 kb on + strand, within AO353_07620 at 1678.199 kb on + strand, within AO353_07620 at 1678.200 kb on - strand, within AO353_07620 at 1678.200 kb on - strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.369 kb on + strand, within AO353_07620 at 1678.370 kb on - strand, within AO353_07620 at 1678.370 kb on - strand, within AO353_07620 at 1678.370 kb on - strand, within AO353_07620 at 1678.370 kb on - strand, within AO353_07620 at 1678.370 kb on - strand, within AO353_07620 at 1678.370 kb on - strand, within AO353_07620 at 1678.370 kb on - strand, within AO353_07620 at 1678.370 kb on - strand, within AO353_07620 at 1678.370 kb on - strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.373 kb on + strand, within AO353_07620 at 1678.374 kb on - strand, within AO353_07620 at 1678.374 kb on - strand, within AO353_07620 at 1678.374 kb on - strand, within AO353_07620 at 1678.374 kb on - strand, within AO353_07620 at 1678.374 kb on - strand, within AO353_07620 at 1678.374 kb on - strand, within AO353_07620 at 1678.374 kb on - strand, within AO353_07620 at 1678.374 kb on - strand, within AO353_07620 at 1678.374 kb on - strand, within AO353_07620 at 1678.382 kb on + strand at 1678.382 kb on + strand at 1678.383 kb on - strand at 1678.436 kb on + strand at 1678.436 kb on + strand at 1678.436 kb on + strand at 1678.436 kb on + strand at 1678.521 kb on + strand at 1678.522 kb on - strand at 1678.522 kb on - strand at 1678.522 kb on - strand at 1678.522 kb on - strand at 1678.522 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,676,065 + AO353_07605 0.72 -1.7 1,676,246 + -0.0 1,676,246 + -0.3 1,676,246 + -0.4 1,676,246 + -1.2 1,676,246 + +1.4 1,676,247 - -1.7 1,676,247 - -0.0 1,676,247 - +0.8 1,676,247 - -0.6 1,676,247 - +0.2 1,676,313 + -0.4 1,676,314 - -0.4 1,676,320 + +0.8 1,676,321 - -0.5 1,676,579 + AO353_07610 0.53 -0.8 1,676,580 - AO353_07610 0.53 -0.4 1,677,127 + AO353_07615 0.12 +1.1 1,677,127 + AO353_07615 0.12 -0.2 1,677,127 + AO353_07615 0.12 -0.2 1,677,128 - AO353_07615 0.13 -0.2 1,677,128 - AO353_07615 0.13 -0.0 1,677,128 - AO353_07615 0.13 +1.3 1,677,128 - AO353_07615 0.13 +2.7 1,677,128 - AO353_07615 0.13 +1.4 1,677,128 - AO353_07615 0.13 +0.3 1,677,338 + AO353_07615 0.50 -0.1 1,677,338 + AO353_07615 0.50 -2.7 1,677,338 + AO353_07615 0.50 -0.3 1,677,338 + AO353_07615 0.50 +0.7 1,677,339 - AO353_07615 0.50 +0.9 1,677,339 - AO353_07615 0.50 -1.0 1,677,339 - AO353_07615 0.50 +0.9 1,677,355 + AO353_07615 0.53 -2.1 1,677,355 + AO353_07615 0.53 +0.9 1,677,680 + -0.1 1,677,681 - -0.1 1,677,694 - +1.1 1,677,696 + -0.5 1,677,696 + +0.9 1,677,696 + -0.3 1,677,696 + -0.7 1,677,696 + +2.5 1,677,696 + +0.8 1,677,696 + +0.2 1,677,697 - +0.3 1,677,697 - -0.9 1,677,697 - +0.4 1,677,697 - +1.5 1,677,697 - +1.1 1,677,697 - +0.9 1,677,697 - -1.0 1,677,697 - +0.3 1,677,697 - +0.7 1,677,697 - -0.1 1,677,697 - +0.0 1,677,742 - -0.5 1,677,791 + -0.2 1,677,791 + +0.7 1,677,791 + +0.7 1,677,791 + +0.7 1,677,791 + -1.0 1,677,791 + -0.7 1,677,791 + -1.8 1,677,791 + +0.0 1,677,792 - +1.1 1,677,792 - -0.6 1,677,792 - +0.5 1,677,792 - -1.2 1,677,792 - +0.1 1,677,792 - -0.5 1,677,792 - -0.5 1,677,792 - -0.5 1,677,792 - -0.9 1,677,792 - -0.3 1,677,792 - -1.4 1,677,792 - +1.5 1,677,792 - -0.9 1,677,792 - -0.0 1,677,792 - -0.9 1,677,792 - +0.7 1,677,792 - +0.7 1,677,794 - +0.3 1,677,794 - +0.5 1,677,832 + +1.1 1,677,832 + +0.1 1,677,832 + +0.0 1,677,832 + +0.7 1,677,833 - +0.2 1,677,833 - -0.3 1,677,833 - -0.9 1,677,833 - +2.5 1,677,833 - -0.7 1,677,833 - -0.3 1,677,856 + +0.0 1,677,856 + -2.2 1,677,857 - +0.5 1,677,857 - +0.6 1,677,857 - -0.3 1,677,862 + -0.1 1,677,863 - +0.3 1,677,863 - -1.0 1,677,863 - +1.1 1,677,957 + AO353_07620 0.19 -0.8 1,677,957 + AO353_07620 0.19 +0.2 1,677,957 + AO353_07620 0.19 -0.7 1,677,958 - AO353_07620 0.19 +0.2 1,677,958 - AO353_07620 0.19 +0.3 1,677,958 - AO353_07620 0.19 -1.9 1,677,958 - AO353_07620 0.19 +0.5 1,677,958 - AO353_07620 0.19 -0.3 1,677,958 - AO353_07620 0.19 +1.6 1,677,960 + AO353_07620 0.19 -1.1 1,677,961 - AO353_07620 0.20 -1.4 1,677,961 - AO353_07620 0.20 +1.2 1,678,004 - AO353_07620 0.27 -0.4 1,678,011 + AO353_07620 0.28 -1.4 1,678,047 + AO353_07620 0.34 -0.3 1,678,047 + AO353_07620 0.34 +1.7 1,678,048 - AO353_07620 0.34 +0.7 1,678,048 - AO353_07620 0.34 -0.3 1,678,081 + AO353_07620 0.40 -0.8 1,678,082 - AO353_07620 0.40 +0.9 1,678,199 + AO353_07620 0.60 +0.9 1,678,199 + AO353_07620 0.60 -0.7 1,678,200 - AO353_07620 0.60 -0.0 1,678,200 - AO353_07620 0.60 -0.6 1,678,369 + AO353_07620 0.88 +0.0 1,678,369 + AO353_07620 0.88 +0.9 1,678,369 + AO353_07620 0.88 +0.6 1,678,369 + AO353_07620 0.88 -0.4 1,678,369 + AO353_07620 0.88 +0.9 1,678,369 + AO353_07620 0.88 +1.9 1,678,369 + AO353_07620 0.88 +0.7 1,678,369 + AO353_07620 0.88 -1.0 1,678,369 + AO353_07620 0.88 -1.2 1,678,369 + AO353_07620 0.88 +0.7 1,678,369 + AO353_07620 0.88 +1.0 1,678,370 - AO353_07620 0.88 -0.1 1,678,370 - AO353_07620 0.88 +0.6 1,678,370 - AO353_07620 0.88 +1.1 1,678,370 - AO353_07620 0.88 +1.5 1,678,370 - AO353_07620 0.88 -0.7 1,678,370 - AO353_07620 0.88 +0.5 1,678,370 - AO353_07620 0.88 -1.2 1,678,370 - AO353_07620 0.88 +0.7 1,678,370 - AO353_07620 0.88 -0.2 1,678,373 + AO353_07620 0.89 +0.9 1,678,373 + AO353_07620 0.89 +0.3 1,678,373 + AO353_07620 0.89 -1.3 1,678,373 + AO353_07620 0.89 +0.9 1,678,373 + AO353_07620 0.89 +0.6 1,678,373 + AO353_07620 0.89 -0.3 1,678,373 + AO353_07620 0.89 +0.4 1,678,373 + AO353_07620 0.89 -0.2 1,678,373 + AO353_07620 0.89 +0.8 1,678,373 + AO353_07620 0.89 -0.3 1,678,373 + AO353_07620 0.89 +1.5 1,678,373 + AO353_07620 0.89 -1.1 1,678,374 - AO353_07620 0.89 -0.5 1,678,374 - AO353_07620 0.89 -1.4 1,678,374 - AO353_07620 0.89 +0.1 1,678,374 - AO353_07620 0.89 +0.1 1,678,374 - AO353_07620 0.89 -1.0 1,678,374 - AO353_07620 0.89 +0.6 1,678,374 - AO353_07620 0.89 +0.2 1,678,374 - AO353_07620 0.89 -0.6 1,678,374 - AO353_07620 0.89 -0.9 1,678,382 + +0.5 1,678,382 + +1.5 1,678,383 - -1.0 1,678,436 + -0.4 1,678,436 + -0.3 1,678,436 + -1.2 1,678,436 + +0.1 1,678,521 + +0.5 1,678,522 - -0.5 1,678,522 - +0.1 1,678,522 - +0.5 1,678,522 - -1.2 1,678,522 - -0.4
Or see this region's nucleotide sequence