Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07595 and AO353_07600 are separated by 59 nucleotides AO353_07600 and AO353_07605 are separated by 162 nucleotides AO353_07605 and AO353_07610 overlap by 42 nucleotides AO353_07610 and AO353_07615 are separated by 212 nucleotides
AO353_07595: AO353_07595 - transcriptional regulator, at 1,673,987 to 1,674,667
_07595
AO353_07600: AO353_07600 - ATP-dependent zinc protease, at 1,674,727 to 1,675,230
_07600
AO353_07605: AO353_07605 - acyltransferase, at 1,675,393 to 1,676,322
_07605
AO353_07610: AO353_07610 - hypothetical protein, at 1,676,281 to 1,676,844
_07610
AO353_07615: AO353_07615 - hypothetical protein, at 1,677,057 to 1,677,620
_07615
Position (kb)
1675
1676
1677 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1674.475 kb on + strand, within AO353_07595 at 1674.475 kb on + strand, within AO353_07595 at 1674.476 kb on - strand, within AO353_07595 at 1674.476 kb on - strand, within AO353_07595 at 1674.623 kb on - strand at 1674.658 kb on + strand at 1674.658 kb on + strand at 1674.687 kb on + strand at 1674.687 kb on + strand at 1674.687 kb on + strand at 1674.688 kb on - strand at 1674.688 kb on - strand at 1674.688 kb on - strand at 1674.688 kb on - strand at 1674.688 kb on - strand at 1674.688 kb on - strand at 1674.688 kb on - strand at 1674.741 kb on + strand at 1674.741 kb on + strand at 1674.790 kb on + strand, within AO353_07600 at 1674.790 kb on + strand, within AO353_07600 at 1674.790 kb on + strand, within AO353_07600 at 1674.791 kb on - strand, within AO353_07600 at 1674.791 kb on - strand, within AO353_07600 at 1674.791 kb on - strand, within AO353_07600 at 1674.791 kb on - strand, within AO353_07600 at 1674.791 kb on - strand, within AO353_07600 at 1674.791 kb on - strand, within AO353_07600 at 1674.791 kb on - strand, within AO353_07600 at 1674.791 kb on - strand, within AO353_07600 at 1674.818 kb on + strand, within AO353_07600 at 1675.148 kb on + strand, within AO353_07600 at 1675.148 kb on + strand, within AO353_07600 at 1675.148 kb on + strand, within AO353_07600 at 1675.148 kb on + strand, within AO353_07600 at 1675.148 kb on + strand at 1675.149 kb on - strand, within AO353_07600 at 1675.149 kb on - strand, within AO353_07600 at 1675.149 kb on - strand, within AO353_07600 at 1675.149 kb on - strand, within AO353_07600 at 1675.149 kb on - strand, within AO353_07600 at 1675.149 kb on - strand, within AO353_07600 at 1675.155 kb on - strand, within AO353_07600 at 1675.163 kb on + strand, within AO353_07600 at 1675.163 kb on + strand, within AO353_07600 at 1675.164 kb on - strand, within AO353_07600 at 1675.232 kb on + strand at 1675.232 kb on + strand at 1675.232 kb on + strand at 1675.232 kb on + strand at 1675.232 kb on + strand at 1675.232 kb on + strand at 1675.232 kb on + strand at 1675.232 kb on + strand at 1675.233 kb on - strand at 1675.233 kb on - strand at 1675.233 kb on - strand at 1675.233 kb on - strand at 1675.233 kb on - strand at 1675.250 kb on + strand at 1675.250 kb on + strand at 1675.250 kb on + strand at 1675.250 kb on + strand at 1675.251 kb on - strand at 1675.266 kb on + strand at 1675.279 kb on + strand at 1675.279 kb on + strand at 1675.279 kb on + strand at 1675.279 kb on + strand at 1675.279 kb on + strand at 1675.280 kb on - strand at 1675.280 kb on - strand at 1675.280 kb on - strand at 1675.280 kb on - strand at 1675.280 kb on - strand at 1675.280 kb on - strand at 1675.357 kb on + strand at 1675.358 kb on - strand at 1675.358 kb on - strand at 1675.379 kb on + strand at 1675.379 kb on + strand at 1675.380 kb on - strand at 1675.380 kb on - strand at 1675.380 kb on - strand at 1675.380 kb on - strand at 1675.380 kb on - strand at 1675.388 kb on + strand at 1675.388 kb on + strand at 1675.388 kb on + strand at 1675.388 kb on + strand at 1675.388 kb on + strand at 1675.388 kb on + strand at 1675.388 kb on + strand at 1675.388 kb on + strand at 1675.388 kb on + strand at 1675.389 kb on - strand at 1675.389 kb on - strand at 1675.389 kb on - strand at 1675.389 kb on - strand at 1675.389 kb on - strand at 1675.389 kb on - strand at 1675.389 kb on - strand at 1675.392 kb on + strand at 1675.392 kb on + strand at 1675.393 kb on - strand at 1675.393 kb on - strand at 1675.393 kb on - strand at 1675.393 kb on - strand at 1675.393 kb on - strand at 1675.393 kb on - strand at 1675.393 kb on - strand at 1675.436 kb on + strand at 1675.436 kb on + strand at 1675.437 kb on - strand at 1675.437 kb on - strand at 1675.437 kb on - strand at 1675.437 kb on - strand at 1675.497 kb on - strand, within AO353_07605 at 1675.642 kb on + strand, within AO353_07605 at 1675.642 kb on + strand, within AO353_07605 at 1675.642 kb on + strand, within AO353_07605 at 1675.642 kb on + strand, within AO353_07605 at 1675.643 kb on - strand, within AO353_07605 at 1675.643 kb on - strand, within AO353_07605 at 1675.643 kb on - strand, within AO353_07605 at 1675.643 kb on - strand, within AO353_07605 at 1675.643 kb on - strand, within AO353_07605 at 1675.807 kb on + strand, within AO353_07605 at 1675.915 kb on + strand, within AO353_07605 at 1675.915 kb on + strand, within AO353_07605 at 1675.915 kb on + strand, within AO353_07605 at 1675.915 kb on + strand, within AO353_07605 at 1675.916 kb on - strand, within AO353_07605 at 1675.916 kb on - strand, within AO353_07605 at 1675.916 kb on - strand, within AO353_07605 at 1675.916 kb on - strand, within AO353_07605 at 1675.979 kb on + strand, within AO353_07605 at 1675.979 kb on + strand, within AO353_07605 at 1675.979 kb on + strand, within AO353_07605 at 1675.979 kb on + strand, within AO353_07605 at 1675.979 kb on + strand, within AO353_07605 at 1675.980 kb on - strand, within AO353_07605 at 1675.980 kb on - strand, within AO353_07605 at 1675.980 kb on - strand, within AO353_07605 at 1675.980 kb on - strand, within AO353_07605 at 1676.012 kb on + strand, within AO353_07605 at 1676.012 kb on + strand, within AO353_07605 at 1676.012 kb on + strand, within AO353_07605 at 1676.012 kb on + strand, within AO353_07605 at 1676.012 kb on + strand, within AO353_07605 at 1676.012 kb on + strand, within AO353_07605 at 1676.013 kb on - strand, within AO353_07605 at 1676.013 kb on - strand, within AO353_07605 at 1676.013 kb on - strand, within AO353_07605 at 1676.065 kb on + strand, within AO353_07605 at 1676.246 kb on + strand at 1676.246 kb on + strand at 1676.246 kb on + strand at 1676.246 kb on + strand at 1676.246 kb on + strand at 1676.247 kb on - strand at 1676.247 kb on - strand at 1676.247 kb on - strand at 1676.247 kb on - strand at 1676.247 kb on - strand at 1676.313 kb on + strand at 1676.314 kb on - strand at 1676.320 kb on + strand at 1676.321 kb on - strand at 1676.579 kb on + strand, within AO353_07610 at 1676.580 kb on - strand, within AO353_07610 at 1677.127 kb on + strand, within AO353_07615 at 1677.127 kb on + strand, within AO353_07615 at 1677.127 kb on + strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615 at 1677.128 kb on - strand, within AO353_07615
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,674,475 + AO353_07595 0.72 -0.6 1,674,475 + AO353_07595 0.72 -1.6 1,674,476 - AO353_07595 0.72 -0.1 1,674,476 - AO353_07595 0.72 -0.0 1,674,623 - +0.4 1,674,658 + +0.1 1,674,658 + +1.1 1,674,687 + +0.3 1,674,687 + -1.0 1,674,687 + -0.3 1,674,688 - -0.3 1,674,688 - +0.5 1,674,688 - +0.4 1,674,688 - +1.5 1,674,688 - +0.7 1,674,688 - -1.7 1,674,688 - -0.2 1,674,741 + -0.5 1,674,741 + +0.7 1,674,790 + AO353_07600 0.12 +0.6 1,674,790 + AO353_07600 0.12 -0.8 1,674,790 + AO353_07600 0.12 -0.8 1,674,791 - AO353_07600 0.13 +0.3 1,674,791 - AO353_07600 0.13 +0.7 1,674,791 - AO353_07600 0.13 +0.7 1,674,791 - AO353_07600 0.13 -0.7 1,674,791 - AO353_07600 0.13 +1.5 1,674,791 - AO353_07600 0.13 -0.5 1,674,791 - AO353_07600 0.13 +1.5 1,674,791 - AO353_07600 0.13 -0.5 1,674,818 + AO353_07600 0.18 -0.7 1,675,148 + AO353_07600 0.84 -0.2 1,675,148 + AO353_07600 0.84 -0.1 1,675,148 + AO353_07600 0.84 +0.2 1,675,148 + AO353_07600 0.84 -0.3 1,675,148 + +0.9 1,675,149 - AO353_07600 0.84 +0.1 1,675,149 - AO353_07600 0.84 +0.5 1,675,149 - AO353_07600 0.84 -1.1 1,675,149 - AO353_07600 0.84 +0.1 1,675,149 - AO353_07600 0.84 -1.6 1,675,149 - AO353_07600 0.84 -1.4 1,675,155 - AO353_07600 0.85 +0.3 1,675,163 + AO353_07600 0.87 +1.1 1,675,163 + AO353_07600 0.87 -0.9 1,675,164 - AO353_07600 0.87 -0.5 1,675,232 + -0.1 1,675,232 + -0.1 1,675,232 + -0.7 1,675,232 + +0.9 1,675,232 + +0.9 1,675,232 + +0.3 1,675,232 + +0.9 1,675,232 + +0.7 1,675,233 - +0.1 1,675,233 - -1.0 1,675,233 - -0.1 1,675,233 - -0.4 1,675,233 - +0.2 1,675,250 + +0.1 1,675,250 + -0.4 1,675,250 + -0.0 1,675,250 + +0.9 1,675,251 - +0.0 1,675,266 + +1.3 1,675,279 + +0.9 1,675,279 + -0.5 1,675,279 + +2.5 1,675,279 + +2.5 1,675,279 + -0.7 1,675,280 - -0.3 1,675,280 - +2.5 1,675,280 - -0.2 1,675,280 - -2.0 1,675,280 - +0.8 1,675,280 - +0.9 1,675,357 + -1.2 1,675,358 - -1.4 1,675,358 - +0.5 1,675,379 + +0.8 1,675,379 + +0.3 1,675,380 - +1.5 1,675,380 - -0.0 1,675,380 - -0.0 1,675,380 - -1.1 1,675,380 - +0.3 1,675,388 + -0.8 1,675,388 + -0.1 1,675,388 + -0.3 1,675,388 + -0.7 1,675,388 + -0.6 1,675,388 + +1.7 1,675,388 + +1.0 1,675,388 + -0.7 1,675,388 + -1.5 1,675,389 - -0.2 1,675,389 - +1.7 1,675,389 - -0.1 1,675,389 - -0.7 1,675,389 - -1.2 1,675,389 - -0.1 1,675,389 - +0.5 1,675,392 + +0.1 1,675,392 + +0.4 1,675,393 - -0.1 1,675,393 - -1.8 1,675,393 - -1.3 1,675,393 - -1.4 1,675,393 - -0.3 1,675,393 - +0.9 1,675,393 - -0.3 1,675,436 + -1.0 1,675,436 + -0.5 1,675,437 - -1.2 1,675,437 - -0.4 1,675,437 - +1.5 1,675,437 - -1.9 1,675,497 - AO353_07605 0.11 -0.5 1,675,642 + AO353_07605 0.27 -0.9 1,675,642 + AO353_07605 0.27 +2.5 1,675,642 + AO353_07605 0.27 -0.8 1,675,642 + AO353_07605 0.27 -0.5 1,675,643 - AO353_07605 0.27 +0.1 1,675,643 - AO353_07605 0.27 +2.2 1,675,643 - AO353_07605 0.27 +1.1 1,675,643 - AO353_07605 0.27 -0.1 1,675,643 - AO353_07605 0.27 +2.0 1,675,807 + AO353_07605 0.45 +0.2 1,675,915 + AO353_07605 0.56 -0.0 1,675,915 + AO353_07605 0.56 +2.1 1,675,915 + AO353_07605 0.56 -0.0 1,675,915 + AO353_07605 0.56 -1.1 1,675,916 - AO353_07605 0.56 -0.1 1,675,916 - AO353_07605 0.56 +0.4 1,675,916 - AO353_07605 0.56 +0.1 1,675,916 - AO353_07605 0.56 +1.6 1,675,979 + AO353_07605 0.63 +2.2 1,675,979 + AO353_07605 0.63 -0.1 1,675,979 + AO353_07605 0.63 +1.3 1,675,979 + AO353_07605 0.63 -0.4 1,675,979 + AO353_07605 0.63 -0.9 1,675,980 - AO353_07605 0.63 -0.6 1,675,980 - AO353_07605 0.63 +0.5 1,675,980 - AO353_07605 0.63 +0.5 1,675,980 - AO353_07605 0.63 +1.5 1,676,012 + AO353_07605 0.67 -1.2 1,676,012 + AO353_07605 0.67 +2.0 1,676,012 + AO353_07605 0.67 +0.2 1,676,012 + AO353_07605 0.67 -0.9 1,676,012 + AO353_07605 0.67 +0.6 1,676,012 + AO353_07605 0.67 +1.2 1,676,013 - AO353_07605 0.67 +0.1 1,676,013 - AO353_07605 0.67 +0.9 1,676,013 - AO353_07605 0.67 -0.2 1,676,065 + AO353_07605 0.72 -1.7 1,676,246 + -0.0 1,676,246 + -0.3 1,676,246 + -0.4 1,676,246 + -1.2 1,676,246 + +1.4 1,676,247 - -1.7 1,676,247 - -0.0 1,676,247 - +0.8 1,676,247 - -0.6 1,676,247 - +0.2 1,676,313 + -0.4 1,676,314 - -0.4 1,676,320 + +0.8 1,676,321 - -0.5 1,676,579 + AO353_07610 0.53 -0.8 1,676,580 - AO353_07610 0.53 -0.4 1,677,127 + AO353_07615 0.12 +1.1 1,677,127 + AO353_07615 0.12 -0.2 1,677,127 + AO353_07615 0.12 -0.2 1,677,128 - AO353_07615 0.13 -0.2 1,677,128 - AO353_07615 0.13 -0.0 1,677,128 - AO353_07615 0.13 +1.3 1,677,128 - AO353_07615 0.13 +2.7 1,677,128 - AO353_07615 0.13 +1.4 1,677,128 - AO353_07615 0.13 +0.3
Or see this region's nucleotide sequence