Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07305 and AO353_07310 overlap by 4 nucleotides AO353_07310 and AO353_07315 overlap by 4 nucleotides AO353_07315 and AO353_07320 are separated by 118 nucleotides AO353_07320 and AO353_07325 overlap by 1 nucleotides
AO353_07305: AO353_07305 - molecular chaperone SurA, at 1,605,478 to 1,606,794
_07305
AO353_07310: AO353_07310 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 1,606,791 to 1,607,780
_07310
AO353_07315: AO353_07315 - rRNA methyltransferase, at 1,607,777 to 1,608,595
_07315
AO353_07320: AO353_07320 - magnesium transporter ApaG, at 1,608,714 to 1,609,094
_07320
AO353_07325: AO353_07325 - diadenosine tetraphosphatase, at 1,609,094 to 1,609,975
_07325
Position (kb)
1607
1608
1609 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1607.777 kb on - strand at 1607.789 kb on + strand at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.113 kb on + strand, within AO353_07315 at 1608.263 kb on + strand, within AO353_07315 at 1608.617 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.643 kb on + strand at 1608.644 kb on - strand at 1608.644 kb on - strand at 1608.644 kb on - strand at 1608.644 kb on - strand at 1608.647 kb on - strand at 1608.662 kb on + strand at 1608.662 kb on + strand at 1608.662 kb on + strand at 1608.681 kb on + strand at 1608.682 kb on - strand at 1608.682 kb on - strand at 1608.682 kb on - strand at 1608.701 kb on + strand at 1608.701 kb on + strand at 1608.702 kb on - strand at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.807 kb on + strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.808 kb on - strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.820 kb on + strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.821 kb on - strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.824 kb on + strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.825 kb on - strand, within AO353_07320 at 1608.868 kb on + strand, within AO353_07320 at 1608.868 kb on + strand, within AO353_07320 at 1608.868 kb on + strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.869 kb on - strand, within AO353_07320 at 1608.873 kb on - strand, within AO353_07320 at 1608.873 kb on - strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.960 kb on + strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1608.961 kb on - strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.011 kb on + strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.012 kb on - strand, within AO353_07320 at 1609.034 kb on + strand, within AO353_07320 at 1609.251 kb on - strand, within AO353_07325 at 1609.522 kb on - strand, within AO353_07325 at 1609.522 kb on - strand, within AO353_07325 at 1609.563 kb on - strand, within AO353_07325
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,607,777 - -0.3 1,607,789 + +0.8 1,608,113 + AO353_07315 0.41 -1.3 1,608,113 + AO353_07315 0.41 +1.8 1,608,113 + AO353_07315 0.41 -0.4 1,608,113 + AO353_07315 0.41 -1.6 1,608,113 + AO353_07315 0.41 -1.2 1,608,263 + AO353_07315 0.59 -0.2 1,608,617 + -0.4 1,608,643 + -0.7 1,608,643 + +0.8 1,608,643 + +0.4 1,608,643 + -0.7 1,608,643 + +0.3 1,608,643 + -0.0 1,608,644 - -1.0 1,608,644 - +2.2 1,608,644 - +0.6 1,608,644 - -1.3 1,608,647 - +0.6 1,608,662 + -0.1 1,608,662 + -0.7 1,608,662 + -1.7 1,608,681 + -1.4 1,608,682 - -0.7 1,608,682 - -1.2 1,608,682 - -0.4 1,608,701 + -0.2 1,608,701 + +0.4 1,608,702 - -0.7 1,608,807 + AO353_07320 0.24 -0.3 1,608,807 + AO353_07320 0.24 +2.0 1,608,807 + AO353_07320 0.24 -0.0 1,608,807 + AO353_07320 0.24 +0.6 1,608,807 + AO353_07320 0.24 +0.6 1,608,808 - AO353_07320 0.25 -0.9 1,608,808 - AO353_07320 0.25 -0.2 1,608,808 - AO353_07320 0.25 +0.4 1,608,808 - AO353_07320 0.25 -0.8 1,608,808 - AO353_07320 0.25 -1.2 1,608,808 - AO353_07320 0.25 +0.6 1,608,820 + AO353_07320 0.28 -0.9 1,608,820 + AO353_07320 0.28 -1.7 1,608,820 + AO353_07320 0.28 +0.4 1,608,820 + AO353_07320 0.28 +0.7 1,608,820 + AO353_07320 0.28 +0.2 1,608,820 + AO353_07320 0.28 -0.7 1,608,820 + AO353_07320 0.28 +0.0 1,608,820 + AO353_07320 0.28 +0.4 1,608,820 + AO353_07320 0.28 -0.2 1,608,820 + AO353_07320 0.28 +0.8 1,608,820 + AO353_07320 0.28 -2.0 1,608,821 - AO353_07320 0.28 +0.7 1,608,821 - AO353_07320 0.28 -0.2 1,608,821 - AO353_07320 0.28 -2.8 1,608,821 - AO353_07320 0.28 -0.9 1,608,821 - AO353_07320 0.28 +0.5 1,608,821 - AO353_07320 0.28 -0.7 1,608,821 - AO353_07320 0.28 +0.3 1,608,821 - AO353_07320 0.28 -0.4 1,608,821 - AO353_07320 0.28 +0.0 1,608,821 - AO353_07320 0.28 -0.3 1,608,824 + AO353_07320 0.29 -1.8 1,608,824 + AO353_07320 0.29 +1.4 1,608,824 + AO353_07320 0.29 +0.1 1,608,824 + AO353_07320 0.29 -0.0 1,608,824 + AO353_07320 0.29 -1.2 1,608,824 + AO353_07320 0.29 -1.1 1,608,824 + AO353_07320 0.29 -2.0 1,608,824 + AO353_07320 0.29 -0.4 1,608,824 + AO353_07320 0.29 -0.6 1,608,824 + AO353_07320 0.29 -0.5 1,608,824 + AO353_07320 0.29 -1.7 1,608,824 + AO353_07320 0.29 -0.2 1,608,825 - AO353_07320 0.29 +0.6 1,608,825 - AO353_07320 0.29 -0.4 1,608,825 - AO353_07320 0.29 +1.4 1,608,825 - AO353_07320 0.29 -0.5 1,608,825 - AO353_07320 0.29 +0.3 1,608,825 - AO353_07320 0.29 +1.4 1,608,825 - AO353_07320 0.29 -0.5 1,608,825 - AO353_07320 0.29 -0.6 1,608,825 - AO353_07320 0.29 -0.2 1,608,825 - AO353_07320 0.29 -1.6 1,608,825 - AO353_07320 0.29 -0.0 1,608,825 - AO353_07320 0.29 -0.1 1,608,868 + AO353_07320 0.40 +0.1 1,608,868 + AO353_07320 0.40 -0.8 1,608,868 + AO353_07320 0.40 -0.8 1,608,869 - AO353_07320 0.41 -1.5 1,608,869 - AO353_07320 0.41 -1.2 1,608,869 - AO353_07320 0.41 -0.1 1,608,869 - AO353_07320 0.41 +1.1 1,608,869 - AO353_07320 0.41 -0.3 1,608,873 - AO353_07320 0.42 -0.6 1,608,873 - AO353_07320 0.42 +0.7 1,608,960 + AO353_07320 0.65 +0.7 1,608,960 + AO353_07320 0.65 -0.7 1,608,960 + AO353_07320 0.65 -0.2 1,608,960 + AO353_07320 0.65 +0.2 1,608,960 + AO353_07320 0.65 +0.1 1,608,960 + AO353_07320 0.65 -0.2 1,608,960 + AO353_07320 0.65 +0.6 1,608,960 + AO353_07320 0.65 -0.9 1,608,960 + AO353_07320 0.65 -0.3 1,608,960 + AO353_07320 0.65 -0.4 1,608,961 - AO353_07320 0.65 -0.6 1,608,961 - AO353_07320 0.65 +0.6 1,608,961 - AO353_07320 0.65 +0.4 1,608,961 - AO353_07320 0.65 +0.2 1,608,961 - AO353_07320 0.65 -2.6 1,608,961 - AO353_07320 0.65 +0.4 1,608,961 - AO353_07320 0.65 +0.8 1,608,961 - AO353_07320 0.65 -0.6 1,608,961 - AO353_07320 0.65 -1.3 1,609,011 + AO353_07320 0.78 +0.3 1,609,011 + AO353_07320 0.78 +0.1 1,609,011 + AO353_07320 0.78 +2.2 1,609,011 + AO353_07320 0.78 +0.4 1,609,012 - AO353_07320 0.78 -1.3 1,609,012 - AO353_07320 0.78 +0.4 1,609,012 - AO353_07320 0.78 +0.4 1,609,012 - AO353_07320 0.78 -0.9 1,609,034 + AO353_07320 0.84 -0.6 1,609,251 - AO353_07325 0.18 +1.4 1,609,522 - AO353_07325 0.49 -0.6 1,609,522 - AO353_07325 0.49 -0.2 1,609,563 - AO353_07325 0.53 -0.6
Or see this region's nucleotide sequence