Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07205 and AO353_07210 are separated by 67 nucleotides AO353_07210 and AO353_07215 overlap by 4 nucleotides AO353_07215 and AO353_07220 are separated by 9 nucleotides
AO353_07205: AO353_07205 - lipoate--protein ligase, at 1,580,560 to 1,581,261
_07205
AO353_07210: AO353_07210 - indole-3-glycerol-phosphate synthase, at 1,581,329 to 1,582,165
_07210
AO353_07215: AO353_07215 - anthranilate phosphoribosyltransferase, at 1,582,162 to 1,583,211
_07215
AO353_07220: AO353_07220 - anthranilate synthase, at 1,583,221 to 1,583,814
_07220
Position (kb)
1582
1583
1584 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1581.249 kb on + strand at 1581.249 kb on + strand at 1581.249 kb on + strand at 1581.249 kb on + strand at 1581.250 kb on - strand at 1581.250 kb on - strand at 1581.250 kb on - strand at 1581.250 kb on - strand at 1581.288 kb on - strand at 1581.340 kb on + strand at 1581.340 kb on + strand at 1581.340 kb on + strand at 1581.340 kb on + strand at 1581.341 kb on - strand at 1581.341 kb on - strand at 1581.341 kb on - strand at 1581.341 kb on - strand at 1581.441 kb on + strand, within AO353_07210 at 1581.441 kb on + strand, within AO353_07210 at 1581.441 kb on + strand, within AO353_07210 at 1581.441 kb on + strand, within AO353_07210 at 1581.441 kb on + strand, within AO353_07210 at 1581.442 kb on - strand, within AO353_07210 at 1581.442 kb on - strand, within AO353_07210 at 1581.500 kb on - strand, within AO353_07210 at 1581.604 kb on + strand, within AO353_07210 at 1581.843 kb on + strand, within AO353_07210 at 1581.843 kb on + strand, within AO353_07210 at 1581.843 kb on + strand, within AO353_07210 at 1581.844 kb on - strand, within AO353_07210 at 1581.844 kb on - strand, within AO353_07210 at 1581.844 kb on - strand, within AO353_07210 at 1581.844 kb on - strand, within AO353_07210 at 1581.844 kb on - strand, within AO353_07210 at 1581.912 kb on + strand, within AO353_07210 at 1581.912 kb on + strand, within AO353_07210 at 1582.145 kb on + strand at 1582.158 kb on - strand at 1582.158 kb on - strand at 1582.158 kb on - strand at 1582.298 kb on + strand, within AO353_07215 at 1582.298 kb on + strand, within AO353_07215 at 1582.299 kb on - strand, within AO353_07215 at 1582.299 kb on - strand, within AO353_07215 at 1582.299 kb on - strand, within AO353_07215 at 1582.299 kb on - strand, within AO353_07215 at 1582.299 kb on - strand, within AO353_07215 at 1582.469 kb on + strand, within AO353_07215 at 1582.470 kb on - strand, within AO353_07215 at 1582.689 kb on + strand, within AO353_07215 at 1582.689 kb on + strand, within AO353_07215 at 1582.689 kb on + strand, within AO353_07215 at 1582.689 kb on + strand, within AO353_07215 at 1582.689 kb on + strand, within AO353_07215 at 1582.689 kb on + strand, within AO353_07215 at 1582.689 kb on + strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.690 kb on - strand, within AO353_07215 at 1582.817 kb on + strand, within AO353_07215 at 1582.817 kb on + strand, within AO353_07215 at 1582.817 kb on + strand, within AO353_07215 at 1582.817 kb on + strand, within AO353_07215 at 1582.818 kb on - strand, within AO353_07215 at 1582.818 kb on - strand, within AO353_07215 at 1582.818 kb on - strand, within AO353_07215 at 1582.972 kb on + strand, within AO353_07215 at 1582.972 kb on + strand, within AO353_07215 at 1582.972 kb on + strand, within AO353_07215 at 1582.972 kb on + strand, within AO353_07215 at 1583.503 kb on - strand, within AO353_07220 at 1583.508 kb on + strand, within AO353_07220 at 1583.508 kb on + strand, within AO353_07220 at 1583.509 kb on - strand, within AO353_07220 at 1583.517 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.536 kb on + strand, within AO353_07220 at 1583.537 kb on - strand, within AO353_07220 at 1583.537 kb on - strand, within AO353_07220 at 1583.537 kb on - strand, within AO353_07220 at 1583.537 kb on - strand, within AO353_07220 at 1583.537 kb on - strand, within AO353_07220 at 1583.537 kb on - strand, within AO353_07220 at 1583.537 kb on - strand, within AO353_07220 at 1583.537 kb on - strand, within AO353_07220 at 1583.612 kb on + strand, within AO353_07220 at 1583.612 kb on + strand, within AO353_07220 at 1583.612 kb on + strand, within AO353_07220 at 1583.612 kb on + strand, within AO353_07220 at 1583.612 kb on + strand, within AO353_07220 at 1583.613 kb on - strand, within AO353_07220 at 1583.749 kb on + strand, within AO353_07220 at 1583.749 kb on + strand, within AO353_07220 at 1583.749 kb on + strand, within AO353_07220 at 1583.750 kb on - strand, within AO353_07220 at 1583.750 kb on - strand, within AO353_07220 at 1583.762 kb on + strand at 1583.763 kb on - strand at 1583.763 kb on - strand at 1583.763 kb on - strand at 1583.777 kb on + strand at 1583.777 kb on + strand at 1583.777 kb on + strand at 1583.777 kb on + strand at 1583.777 kb on + strand at 1583.777 kb on + strand at 1583.777 kb on + strand at 1583.777 kb on + strand at 1583.778 kb on - strand at 1583.778 kb on - strand at 1583.781 kb on + strand at 1583.781 kb on + strand at 1583.782 kb on - strand at 1583.782 kb on - strand at 1583.792 kb on + strand at 1583.792 kb on + strand at 1583.792 kb on + strand at 1583.792 kb on + strand at 1583.792 kb on + strand at 1583.792 kb on + strand at 1583.792 kb on + strand at 1583.792 kb on + strand at 1583.793 kb on - strand at 1583.793 kb on - strand at 1583.793 kb on - strand at 1583.793 kb on - strand at 1583.793 kb on - strand at 1583.793 kb on - strand at 1583.793 kb on - strand at 1583.793 kb on - strand at 1583.793 kb on - strand at 1583.797 kb on - strand at 1583.866 kb on + strand at 1583.928 kb on + strand at 1584.067 kb on + strand at 1584.067 kb on + strand at 1584.067 kb on + strand at 1584.067 kb on + strand at 1584.067 kb on + strand at 1584.067 kb on + strand at 1584.068 kb on - strand at 1584.068 kb on - strand at 1584.068 kb on - strand at 1584.068 kb on - strand at 1584.082 kb on + strand at 1584.083 kb on - strand at 1584.083 kb on - strand at 1584.087 kb on + strand at 1584.087 kb on + strand at 1584.087 kb on + strand at 1584.087 kb on + strand at 1584.087 kb on + strand at 1584.087 kb on + strand at 1584.087 kb on + strand at 1584.087 kb on + strand at 1584.087 kb on + strand at 1584.087 kb on + strand at 1584.088 kb on - strand at 1584.088 kb on - strand at 1584.088 kb on - strand at 1584.088 kb on - strand at 1584.088 kb on - strand at 1584.088 kb on - strand at 1584.088 kb on - strand at 1584.088 kb on - strand at 1584.088 kb on - strand at 1584.107 kb on + strand at 1584.108 kb on - strand at 1584.108 kb on - strand at 1584.146 kb on - strand at 1584.146 kb on - strand at 1584.146 kb on - strand at 1584.146 kb on - strand at 1584.146 kb on - strand at 1584.149 kb on + strand at 1584.149 kb on + strand at 1584.149 kb on + strand at 1584.149 kb on + strand at 1584.150 kb on - strand at 1584.150 kb on - strand at 1584.150 kb on - strand at 1584.187 kb on + strand at 1584.187 kb on + strand at 1584.188 kb on - strand at 1584.188 kb on - strand at 1584.195 kb on + strand at 1584.196 kb on - strand at 1584.196 kb on - strand at 1584.196 kb on - strand at 1584.196 kb on - strand at 1584.196 kb on - strand at 1584.196 kb on - strand at 1584.196 kb on - strand at 1584.196 kb on - strand at 1584.200 kb on + strand at 1584.200 kb on + strand at 1584.201 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,581,249 + +0.3 1,581,249 + -0.4 1,581,249 + -0.1 1,581,249 + +1.1 1,581,250 - +1.4 1,581,250 - +0.3 1,581,250 - +0.8 1,581,250 - -2.0 1,581,288 - +1.4 1,581,340 + -0.2 1,581,340 + +1.8 1,581,340 + -0.6 1,581,340 + -1.0 1,581,341 - +0.8 1,581,341 - -0.3 1,581,341 - -0.1 1,581,341 - -0.6 1,581,441 + AO353_07210 0.13 +0.1 1,581,441 + AO353_07210 0.13 -1.8 1,581,441 + AO353_07210 0.13 -0.6 1,581,441 + AO353_07210 0.13 -2.9 1,581,441 + AO353_07210 0.13 -0.6 1,581,442 - AO353_07210 0.14 -0.2 1,581,442 - AO353_07210 0.14 -0.6 1,581,500 - AO353_07210 0.20 +0.1 1,581,604 + AO353_07210 0.33 -1.4 1,581,843 + AO353_07210 0.61 -0.7 1,581,843 + AO353_07210 0.61 -2.1 1,581,843 + AO353_07210 0.61 -1.4 1,581,844 - AO353_07210 0.62 -1.7 1,581,844 - AO353_07210 0.62 -2.2 1,581,844 - AO353_07210 0.62 -0.8 1,581,844 - AO353_07210 0.62 -0.2 1,581,844 - AO353_07210 0.62 -1.7 1,581,912 + AO353_07210 0.70 -1.7 1,581,912 + AO353_07210 0.70 -0.7 1,582,145 + -1.0 1,582,158 - -1.4 1,582,158 - +2.4 1,582,158 - -1.1 1,582,298 + AO353_07215 0.13 +1.4 1,582,298 + AO353_07215 0.13 -0.7 1,582,299 - AO353_07215 0.13 +0.8 1,582,299 - AO353_07215 0.13 +0.4 1,582,299 - AO353_07215 0.13 -0.2 1,582,299 - AO353_07215 0.13 +0.1 1,582,299 - AO353_07215 0.13 +0.1 1,582,469 + AO353_07215 0.29 -2.4 1,582,470 - AO353_07215 0.29 -0.9 1,582,689 + AO353_07215 0.50 -1.7 1,582,689 + AO353_07215 0.50 -2.7 1,582,689 + AO353_07215 0.50 -2.3 1,582,689 + AO353_07215 0.50 -2.2 1,582,689 + AO353_07215 0.50 -1.0 1,582,689 + AO353_07215 0.50 -1.7 1,582,689 + AO353_07215 0.50 -2.3 1,582,690 - AO353_07215 0.50 -2.2 1,582,690 - AO353_07215 0.50 -1.0 1,582,690 - AO353_07215 0.50 -0.0 1,582,690 - AO353_07215 0.50 -1.0 1,582,690 - AO353_07215 0.50 -1.0 1,582,690 - AO353_07215 0.50 -0.6 1,582,690 - AO353_07215 0.50 +0.4 1,582,690 - AO353_07215 0.50 -1.4 1,582,690 - AO353_07215 0.50 -2.2 1,582,690 - AO353_07215 0.50 -1.3 1,582,690 - AO353_07215 0.50 -1.7 1,582,690 - AO353_07215 0.50 -0.2 1,582,817 + AO353_07215 0.62 -2.4 1,582,817 + AO353_07215 0.62 -0.6 1,582,817 + AO353_07215 0.62 -1.6 1,582,817 + AO353_07215 0.62 +0.1 1,582,818 - AO353_07215 0.62 +1.4 1,582,818 - AO353_07215 0.62 -1.0 1,582,818 - AO353_07215 0.62 +1.4 1,582,972 + AO353_07215 0.77 -1.4 1,582,972 + AO353_07215 0.77 +0.8 1,582,972 + AO353_07215 0.77 -0.7 1,582,972 + AO353_07215 0.77 +0.1 1,583,503 - AO353_07220 0.47 -1.5 1,583,508 + AO353_07220 0.48 +0.3 1,583,508 + AO353_07220 0.48 -3.6 1,583,509 - AO353_07220 0.48 -2.0 1,583,517 + AO353_07220 0.50 -2.5 1,583,536 + AO353_07220 0.53 -1.3 1,583,536 + AO353_07220 0.53 -1.7 1,583,536 + AO353_07220 0.53 -0.4 1,583,536 + AO353_07220 0.53 +0.6 1,583,536 + AO353_07220 0.53 -1.3 1,583,536 + AO353_07220 0.53 -2.0 1,583,536 + AO353_07220 0.53 -0.9 1,583,536 + AO353_07220 0.53 -2.6 1,583,536 + AO353_07220 0.53 -0.7 1,583,536 + AO353_07220 0.53 -1.0 1,583,537 - AO353_07220 0.53 -0.8 1,583,537 - AO353_07220 0.53 +0.4 1,583,537 - AO353_07220 0.53 +0.8 1,583,537 - AO353_07220 0.53 +0.1 1,583,537 - AO353_07220 0.53 -0.8 1,583,537 - AO353_07220 0.53 -0.4 1,583,537 - AO353_07220 0.53 -1.0 1,583,537 - AO353_07220 0.53 -1.0 1,583,612 + AO353_07220 0.66 -0.4 1,583,612 + AO353_07220 0.66 -1.6 1,583,612 + AO353_07220 0.66 -1.4 1,583,612 + AO353_07220 0.66 -1.0 1,583,612 + AO353_07220 0.66 -0.2 1,583,613 - AO353_07220 0.66 -2.6 1,583,749 + AO353_07220 0.89 -1.2 1,583,749 + AO353_07220 0.89 -2.1 1,583,749 + AO353_07220 0.89 -1.5 1,583,750 - AO353_07220 0.89 -0.2 1,583,750 - AO353_07220 0.89 -2.3 1,583,762 + -2.4 1,583,763 - +0.4 1,583,763 - -1.6 1,583,763 - -2.3 1,583,777 + -1.0 1,583,777 + -0.4 1,583,777 + -1.4 1,583,777 + -0.6 1,583,777 + -0.6 1,583,777 + -0.2 1,583,777 + -1.0 1,583,777 + -2.6 1,583,778 - -0.2 1,583,778 - -1.4 1,583,781 + -1.8 1,583,781 + -1.3 1,583,782 - -1.7 1,583,782 - -1.6 1,583,792 + -0.5 1,583,792 + -0.7 1,583,792 + -1.4 1,583,792 + -0.4 1,583,792 + -1.7 1,583,792 + -0.7 1,583,792 + -3.1 1,583,792 + -1.9 1,583,793 - -1.9 1,583,793 - -1.5 1,583,793 - -1.0 1,583,793 - -2.8 1,583,793 - -1.0 1,583,793 - -0.4 1,583,793 - -0.7 1,583,793 - -1.9 1,583,793 - -3.4 1,583,797 - -0.4 1,583,866 + +1.1 1,583,928 + -1.5 1,584,067 + -1.1 1,584,067 + -1.7 1,584,067 + -1.6 1,584,067 + -1.2 1,584,067 + -0.4 1,584,067 + -0.6 1,584,068 - +0.4 1,584,068 - +1.7 1,584,068 - +1.3 1,584,068 - -0.3 1,584,082 + -2.1 1,584,083 - -0.4 1,584,083 - +0.4 1,584,087 + +0.6 1,584,087 + -2.9 1,584,087 + -1.5 1,584,087 + -1.9 1,584,087 + -3.3 1,584,087 + -1.0 1,584,087 + -0.6 1,584,087 + -0.1 1,584,087 + -1.7 1,584,087 + -3.0 1,584,088 - -1.4 1,584,088 - +1.0 1,584,088 - +0.2 1,584,088 - -0.7 1,584,088 - +0.3 1,584,088 - -3.1 1,584,088 - -1.6 1,584,088 - +0.1 1,584,088 - -0.4 1,584,107 + +1.4 1,584,108 - +0.1 1,584,108 - +0.1 1,584,146 - -0.2 1,584,146 - -2.1 1,584,146 - -0.2 1,584,146 - -0.7 1,584,146 - -0.4 1,584,149 + -0.6 1,584,149 + +0.5 1,584,149 + -0.0 1,584,149 + -0.4 1,584,150 - +0.3 1,584,150 - +2.4 1,584,150 - -0.6 1,584,187 + -1.1 1,584,187 + +0.8 1,584,188 - +0.5 1,584,188 - +1.4 1,584,195 + -1.4 1,584,196 - -1.4 1,584,196 - +0.8 1,584,196 - -1.4 1,584,196 - +0.4 1,584,196 - +0.5 1,584,196 - -0.6 1,584,196 - -1.8 1,584,196 - +0.7 1,584,200 + +0.5 1,584,200 + +0.1 1,584,201 - +1.4
Or see this region's nucleotide sequence