Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06410 and AO353_06415 are separated by 89 nucleotides AO353_06415 and AO353_06420 are separated by 39 nucleotides
AO353_06410: AO353_06410 - leucine--tRNA ligase, at 1,428,473 to 1,431,079
_06410
AO353_06415: AO353_06415 - hypothetical protein, at 1,431,169 to 1,431,774
_06415
AO353_06420: AO353_06420 - DNA polymerase III subunit delta, at 1,431,814 to 1,432,851
_06420
Position (kb)
1431
1432 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.077 kb on + strand at 1431.101 kb on + strand at 1431.352 kb on + strand, within AO353_06415 at 1431.352 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.367 kb on + strand, within AO353_06415 at 1431.377 kb on + strand, within AO353_06415 at 1431.442 kb on + strand, within AO353_06415 at 1431.442 kb on + strand, within AO353_06415 at 1431.466 kb on + strand, within AO353_06415 at 1431.466 kb on + strand, within AO353_06415 at 1431.466 kb on + strand, within AO353_06415 at 1431.639 kb on + strand, within AO353_06415 at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.753 kb on + strand at 1431.761 kb on + strand at 1431.761 kb on + strand at 1431.761 kb on + strand at 1431.761 kb on + strand at 1431.813 kb on + strand at 1431.871 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,431,077 + -1.4 1,431,077 + -1.6 1,431,077 + -0.6 1,431,077 + -1.0 1,431,077 + +2.3 1,431,077 + +0.8 1,431,077 + -1.0 1,431,101 + +1.6 1,431,352 + AO353_06415 0.30 +0.8 1,431,352 + AO353_06415 0.30 +0.0 1,431,367 + AO353_06415 0.33 -0.5 1,431,367 + AO353_06415 0.33 +0.3 1,431,367 + AO353_06415 0.33 -0.9 1,431,367 + AO353_06415 0.33 +0.2 1,431,367 + AO353_06415 0.33 +0.1 1,431,367 + AO353_06415 0.33 -1.1 1,431,367 + AO353_06415 0.33 +0.0 1,431,377 + AO353_06415 0.34 +0.0 1,431,442 + AO353_06415 0.45 -0.2 1,431,442 + AO353_06415 0.45 -2.2 1,431,466 + AO353_06415 0.49 +0.0 1,431,466 + AO353_06415 0.49 -2.2 1,431,466 + AO353_06415 0.49 -0.5 1,431,639 + AO353_06415 0.78 -1.2 1,431,753 + +0.3 1,431,753 + -0.5 1,431,753 + +2.3 1,431,753 + -0.3 1,431,753 + -0.5 1,431,753 + +0.9 1,431,753 + -1.2 1,431,753 + -0.1 1,431,753 + -0.2 1,431,753 + -0.7 1,431,753 + +0.0 1,431,753 + +0.5 1,431,753 + +0.5 1,431,753 + -0.4 1,431,753 + -0.2 1,431,761 + -0.2 1,431,761 + +0.5 1,431,761 + +0.1 1,431,761 + +1.6 1,431,813 + +0.4 1,431,871 + -1.4
Or see this region's nucleotide sequence