Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06035 and AO353_06040 are separated by 65 nucleotides AO353_06040 and AO353_06045 overlap by 4 nucleotides
AO353_06035: AO353_06035 - amino acid ABC transporter permease/ATP-binding protein, at 1,339,009 to 1,340,547
_06035
AO353_06040: AO353_06040 - exodeoxyribonuclease V subunit alpha, at 1,340,613 to 1,342,700
_06040
AO353_06045: AO353_06045 - exodeoxyribonuclease V subunit beta, at 1,342,697 to 1,346,386
_06045
Position (kb)
1340
1341
1342
1343 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1339.613 kb on - strand, within AO353_06035 at 1339.613 kb on - strand, within AO353_06035 at 1339.613 kb on - strand, within AO353_06035 at 1339.613 kb on - strand, within AO353_06035 at 1339.613 kb on - strand, within AO353_06035 at 1339.613 kb on - strand at 1339.613 kb on - strand, within AO353_06035 at 1339.613 kb on - strand, within AO353_06035 at 1339.613 kb on - strand, within AO353_06035 at 1339.613 kb on - strand, within AO353_06035 at 1339.613 kb on - strand, within AO353_06035 at 1339.698 kb on - strand, within AO353_06035 at 1339.790 kb on + strand, within AO353_06035 at 1339.791 kb on - strand, within AO353_06035 at 1339.791 kb on - strand, within AO353_06035 at 1339.791 kb on - strand, within AO353_06035 at 1339.903 kb on - strand, within AO353_06035 at 1339.941 kb on + strand, within AO353_06035 at 1339.941 kb on + strand, within AO353_06035 at 1339.942 kb on - strand, within AO353_06035 at 1339.942 kb on - strand, within AO353_06035 at 1339.964 kb on + strand, within AO353_06035 at 1339.964 kb on + strand, within AO353_06035 at 1339.964 kb on + strand, within AO353_06035 at 1339.965 kb on - strand, within AO353_06035 at 1339.965 kb on - strand, within AO353_06035 at 1340.045 kb on + strand, within AO353_06035 at 1340.045 kb on + strand, within AO353_06035 at 1340.045 kb on + strand, within AO353_06035 at 1340.046 kb on - strand, within AO353_06035 at 1340.194 kb on + strand, within AO353_06035 at 1340.195 kb on - strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.321 kb on + strand, within AO353_06035 at 1340.322 kb on - strand, within AO353_06035 at 1340.322 kb on - strand, within AO353_06035 at 1340.322 kb on - strand, within AO353_06035 at 1340.322 kb on - strand, within AO353_06035 at 1340.322 kb on - strand, within AO353_06035 at 1340.322 kb on - strand, within AO353_06035 at 1340.545 kb on + strand at 1340.545 kb on + strand at 1340.545 kb on + strand at 1340.546 kb on - strand at 1340.546 kb on - strand at 1340.546 kb on - strand at 1340.578 kb on + strand at 1340.578 kb on + strand at 1340.661 kb on + strand at 1340.734 kb on + strand at 1340.735 kb on - strand at 1340.834 kb on - strand, within AO353_06040 at 1340.916 kb on + strand, within AO353_06040 at 1340.916 kb on + strand, within AO353_06040 at 1340.916 kb on + strand, within AO353_06040 at 1340.917 kb on - strand, within AO353_06040 at 1341.251 kb on - strand, within AO353_06040 at 1341.294 kb on + strand, within AO353_06040 at 1342.172 kb on + strand, within AO353_06040 at 1342.251 kb on + strand, within AO353_06040 at 1342.251 kb on + strand, within AO353_06040 at 1342.602 kb on + strand at 1342.700 kb on + strand at 1342.700 kb on + strand at 1342.700 kb on + strand at 1342.700 kb on + strand at 1342.701 kb on - strand at 1342.701 kb on - strand at 1342.701 kb on - strand at 1342.701 kb on - strand at 1342.701 kb on - strand at 1342.701 kb on - strand at 1342.706 kb on + strand at 1342.706 kb on + strand at 1342.706 kb on + strand at 1342.706 kb on + strand at 1342.706 kb on + strand at 1342.706 kb on + strand at 1342.706 kb on + strand at 1342.706 kb on + strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.707 kb on - strand at 1342.708 kb on + strand at 1342.708 kb on + strand at 1342.708 kb on + strand at 1342.708 kb on + strand at 1342.708 kb on + strand at 1342.708 kb on + strand at 1342.708 kb on + strand at 1342.709 kb on - strand at 1342.709 kb on - strand at 1342.709 kb on - strand at 1342.709 kb on - strand at 1342.803 kb on + strand at 1342.803 kb on + strand at 1342.804 kb on - strand at 1342.845 kb on + strand at 1342.845 kb on + strand at 1342.846 kb on - strand at 1342.919 kb on + strand at 1342.932 kb on + strand at 1342.933 kb on - strand at 1342.933 kb on - strand at 1343.034 kb on + strand at 1343.035 kb on - strand at 1343.257 kb on + strand, within AO353_06045 at 1343.257 kb on + strand, within AO353_06045 at 1343.592 kb on + strand, within AO353_06045 at 1343.593 kb on - strand, within AO353_06045
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,339,613 - AO353_06035 0.39 -0.3 1,339,613 - AO353_06035 0.39 +0.5 1,339,613 - AO353_06035 0.39 +1.3 1,339,613 - AO353_06035 0.39 -1.1 1,339,613 - AO353_06035 0.39 -0.5 1,339,613 - +0.7 1,339,613 - AO353_06035 0.39 -0.3 1,339,613 - AO353_06035 0.39 -0.4 1,339,613 - AO353_06035 0.39 +0.5 1,339,613 - AO353_06035 0.39 -0.1 1,339,613 - AO353_06035 0.39 +0.1 1,339,698 - AO353_06035 0.45 -0.5 1,339,790 + AO353_06035 0.51 -0.1 1,339,791 - AO353_06035 0.51 -1.9 1,339,791 - AO353_06035 0.51 -0.0 1,339,791 - AO353_06035 0.51 -0.2 1,339,903 - AO353_06035 0.58 +0.2 1,339,941 + AO353_06035 0.61 +0.9 1,339,941 + AO353_06035 0.61 +1.7 1,339,942 - AO353_06035 0.61 -1.0 1,339,942 - AO353_06035 0.61 +1.0 1,339,964 + AO353_06035 0.62 -0.9 1,339,964 + AO353_06035 0.62 +1.0 1,339,964 + AO353_06035 0.62 +0.3 1,339,965 - AO353_06035 0.62 -0.5 1,339,965 - AO353_06035 0.62 -0.5 1,340,045 + AO353_06035 0.67 -0.2 1,340,045 + AO353_06035 0.67 -0.0 1,340,045 + AO353_06035 0.67 -1.3 1,340,046 - AO353_06035 0.67 -1.0 1,340,194 + AO353_06035 0.77 +0.9 1,340,195 - AO353_06035 0.77 +0.3 1,340,321 + AO353_06035 0.85 +1.7 1,340,321 + AO353_06035 0.85 -0.5 1,340,321 + AO353_06035 0.85 -2.1 1,340,321 + AO353_06035 0.85 +0.5 1,340,321 + AO353_06035 0.85 +1.6 1,340,321 + AO353_06035 0.85 +0.6 1,340,321 + AO353_06035 0.85 -0.3 1,340,321 + AO353_06035 0.85 +1.7 1,340,321 + AO353_06035 0.85 +1.5 1,340,321 + AO353_06035 0.85 -1.1 1,340,321 + AO353_06035 0.85 +0.1 1,340,321 + AO353_06035 0.85 +0.7 1,340,321 + AO353_06035 0.85 -1.6 1,340,321 + AO353_06035 0.85 -0.9 1,340,321 + AO353_06035 0.85 +0.2 1,340,321 + AO353_06035 0.85 +1.3 1,340,322 - AO353_06035 0.85 +0.1 1,340,322 - AO353_06035 0.85 +0.3 1,340,322 - AO353_06035 0.85 -1.9 1,340,322 - AO353_06035 0.85 +1.4 1,340,322 - AO353_06035 0.85 +0.3 1,340,322 - AO353_06035 0.85 +0.3 1,340,545 + +1.6 1,340,545 + -0.0 1,340,545 + -0.7 1,340,546 - +0.8 1,340,546 - -2.1 1,340,546 - -0.9 1,340,578 + +1.7 1,340,578 + +2.3 1,340,661 + -0.3 1,340,734 + -2.2 1,340,735 - -1.6 1,340,834 - AO353_06040 0.11 +1.0 1,340,916 + AO353_06040 0.15 +0.3 1,340,916 + AO353_06040 0.15 -0.9 1,340,916 + AO353_06040 0.15 -1.3 1,340,917 - AO353_06040 0.15 -0.5 1,341,251 - AO353_06040 0.31 +0.5 1,341,294 + AO353_06040 0.33 -0.3 1,342,172 + AO353_06040 0.75 -1.1 1,342,251 + AO353_06040 0.78 -0.0 1,342,251 + AO353_06040 0.78 -1.6 1,342,602 + +0.7 1,342,700 + -0.3 1,342,700 + -0.0 1,342,700 + -0.9 1,342,700 + -1.2 1,342,701 - -0.7 1,342,701 - +1.1 1,342,701 - +2.3 1,342,701 - +0.9 1,342,701 - +1.3 1,342,701 - +0.1 1,342,706 + -1.5 1,342,706 + +0.9 1,342,706 + -1.0 1,342,706 + +1.3 1,342,706 + -0.3 1,342,706 + -1.1 1,342,706 + -1.4 1,342,706 + -0.9 1,342,707 - -0.3 1,342,707 - -0.3 1,342,707 - +1.1 1,342,707 - -0.2 1,342,707 - -1.7 1,342,707 - -0.1 1,342,707 - -0.4 1,342,707 - -1.4 1,342,707 - -1.4 1,342,707 - +0.7 1,342,707 - +0.4 1,342,707 - -0.5 1,342,708 + -0.9 1,342,708 + +2.3 1,342,708 + +0.3 1,342,708 + -0.4 1,342,708 + -0.5 1,342,708 + -1.0 1,342,708 + -1.7 1,342,709 - +0.7 1,342,709 - +2.3 1,342,709 - -0.5 1,342,709 - +1.1 1,342,803 + -0.9 1,342,803 + -1.8 1,342,804 - +0.3 1,342,845 + +0.3 1,342,845 + -0.3 1,342,846 - -0.9 1,342,919 + -0.5 1,342,932 + +0.7 1,342,933 - -0.3 1,342,933 - -0.0 1,343,034 + +0.1 1,343,035 - -0.0 1,343,257 + AO353_06045 0.15 -1.5 1,343,257 + AO353_06045 0.15 +0.5 1,343,592 + AO353_06045 0.24 +0.3 1,343,593 - AO353_06045 0.24 -0.0
Or see this region's nucleotide sequence