Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_05795 and AO353_05800 are separated by 503 nucleotides AO353_05800 and AO353_05805 are separated by 2 nucleotides
AO353_05795: AO353_05795 - GNAT family acetyltransferase, at 1,281,066 to 1,281,536
_05795
AO353_05800: AO353_05800 - hypothetical protein, at 1,282,040 to 1,282,276
_05800
AO353_05805: AO353_05805 - cytidine deaminase, at 1,282,279 to 1,283,898
_05805
Position (kb)
1282
1283 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.063 kb on + strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.064 kb on - strand at 1281.131 kb on + strand, within AO353_05795 at 1281.131 kb on + strand, within AO353_05795 at 1281.132 kb on - strand, within AO353_05795 at 1281.219 kb on + strand, within AO353_05795 at 1281.219 kb on + strand, within AO353_05795 at 1281.220 kb on - strand, within AO353_05795 at 1281.220 kb on - strand, within AO353_05795 at 1281.279 kb on - strand, within AO353_05795 at 1281.327 kb on + strand, within AO353_05795 at 1281.328 kb on - strand, within AO353_05795 at 1281.328 kb on - strand, within AO353_05795 at 1281.328 kb on - strand, within AO353_05795 at 1281.328 kb on - strand, within AO353_05795 at 1281.342 kb on + strand, within AO353_05795 at 1281.342 kb on + strand, within AO353_05795 at 1281.342 kb on + strand, within AO353_05795 at 1281.342 kb on + strand, within AO353_05795 at 1281.343 kb on - strand, within AO353_05795 at 1281.395 kb on - strand, within AO353_05795 at 1281.422 kb on + strand, within AO353_05795 at 1281.423 kb on - strand, within AO353_05795 at 1281.423 kb on - strand, within AO353_05795 at 1281.468 kb on + strand, within AO353_05795 at 1281.468 kb on + strand, within AO353_05795 at 1281.468 kb on + strand, within AO353_05795 at 1281.468 kb on + strand, within AO353_05795 at 1281.468 kb on + strand, within AO353_05795 at 1281.468 kb on + strand, within AO353_05795 at 1281.468 kb on + strand, within AO353_05795 at 1281.469 kb on - strand, within AO353_05795 at 1281.469 kb on - strand, within AO353_05795 at 1281.469 kb on - strand, within AO353_05795 at 1281.469 kb on - strand, within AO353_05795 at 1281.470 kb on + strand, within AO353_05795 at 1281.471 kb on - strand, within AO353_05795 at 1281.471 kb on - strand, within AO353_05795 at 1281.534 kb on + strand at 1281.534 kb on + strand at 1281.534 kb on + strand at 1281.535 kb on - strand at 1281.535 kb on - strand at 1281.535 kb on - strand at 1281.541 kb on + strand at 1281.541 kb on + strand at 1281.541 kb on + strand at 1281.541 kb on + strand at 1281.542 kb on - strand at 1281.542 kb on - strand at 1281.542 kb on - strand at 1281.586 kb on + strand at 1281.587 kb on - strand at 1281.587 kb on - strand at 1281.651 kb on - strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.652 kb on + strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.653 kb on - strand at 1281.675 kb on + strand at 1281.675 kb on + strand at 1281.676 kb on - strand at 1281.676 kb on - strand at 1281.676 kb on - strand at 1281.741 kb on + strand at 1281.741 kb on + strand at 1281.742 kb on - strand at 1281.742 kb on - strand at 1281.742 kb on - strand at 1281.742 kb on - strand at 1281.803 kb on - strand at 1281.803 kb on - strand at 1281.811 kb on + strand at 1281.811 kb on + strand at 1281.812 kb on - strand at 1281.846 kb on - strand at 1281.846 kb on - strand at 1281.873 kb on + strand at 1281.873 kb on + strand at 1281.873 kb on + strand at 1281.874 kb on - strand at 1281.874 kb on - strand at 1281.886 kb on + strand at 1281.887 kb on - strand at 1281.887 kb on - strand at 1281.887 kb on - strand at 1281.887 kb on - strand at 1281.887 kb on - strand at 1281.887 kb on - strand at 1281.916 kb on - strand at 1281.947 kb on + strand at 1281.948 kb on - strand at 1281.951 kb on + strand at 1281.951 kb on + strand at 1281.951 kb on + strand at 1281.951 kb on + strand at 1281.951 kb on + strand at 1281.952 kb on - strand at 1281.952 kb on - strand at 1281.989 kb on + strand at 1281.989 kb on + strand at 1281.989 kb on + strand at 1281.989 kb on + strand at 1281.989 kb on + strand at 1281.989 kb on + strand at 1281.989 kb on + strand at 1281.989 kb on + strand at 1281.990 kb on - strand at 1281.990 kb on - strand at 1281.990 kb on - strand at 1282.020 kb on - strand at 1282.033 kb on - strand at 1282.042 kb on - strand at 1282.042 kb on - strand at 1282.105 kb on + strand, within AO353_05800 at 1282.105 kb on + strand, within AO353_05800 at 1282.105 kb on + strand, within AO353_05800 at 1282.105 kb on + strand, within AO353_05800 at 1282.105 kb on + strand, within AO353_05800 at 1282.105 kb on + strand, within AO353_05800 at 1282.121 kb on + strand, within AO353_05800 at 1282.121 kb on + strand, within AO353_05800 at 1282.142 kb on + strand, within AO353_05800 at 1282.142 kb on + strand, within AO353_05800 at 1282.142 kb on + strand, within AO353_05800 at 1282.142 kb on + strand, within AO353_05800 at 1282.142 kb on + strand, within AO353_05800 at 1282.143 kb on - strand, within AO353_05800 at 1282.143 kb on - strand, within AO353_05800 at 1282.157 kb on + strand, within AO353_05800 at 1282.157 kb on + strand, within AO353_05800 at 1282.157 kb on + strand, within AO353_05800 at 1282.158 kb on - strand, within AO353_05800 at 1282.158 kb on - strand, within AO353_05800 at 1282.168 kb on + strand, within AO353_05800 at 1282.169 kb on - strand, within AO353_05800 at 1282.280 kb on + strand at 1282.280 kb on + strand at 1282.280 kb on + strand at 1282.280 kb on + strand at 1282.280 kb on + strand at 1282.281 kb on - strand at 1282.281 kb on - strand at 1282.281 kb on - strand at 1282.281 kb on - strand at 1282.281 kb on - strand at 1282.345 kb on + strand at 1282.345 kb on + strand at 1282.346 kb on - strand at 1282.346 kb on - strand at 1282.346 kb on - strand at 1282.360 kb on + strand at 1282.360 kb on + strand at 1282.360 kb on + strand at 1282.361 kb on - strand at 1282.361 kb on - strand at 1282.361 kb on - strand at 1282.395 kb on + strand at 1282.395 kb on + strand at 1282.395 kb on + strand at 1282.395 kb on + strand at 1282.395 kb on + strand at 1282.395 kb on + strand at 1282.395 kb on + strand at 1282.395 kb on + strand at 1282.395 kb on + strand at 1282.395 kb on + strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.396 kb on - strand at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.528 kb on + strand, within AO353_05805 at 1282.529 kb on - strand, within AO353_05805 at 1282.529 kb on - strand, within AO353_05805 at 1282.529 kb on - strand, within AO353_05805 at 1282.529 kb on - strand, within AO353_05805 at 1282.529 kb on - strand, within AO353_05805 at 1282.529 kb on - strand, within AO353_05805 at 1282.529 kb on - strand, within AO353_05805 at 1282.529 kb on - strand, within AO353_05805 at 1282.590 kb on - strand, within AO353_05805 at 1282.604 kb on + strand, within AO353_05805 at 1282.605 kb on - strand, within AO353_05805 at 1282.630 kb on + strand, within AO353_05805 at 1282.630 kb on + strand, within AO353_05805 at 1282.662 kb on + strand, within AO353_05805 at 1282.662 kb on + strand, within AO353_05805 at 1282.663 kb on - strand, within AO353_05805 at 1282.717 kb on + strand, within AO353_05805 at 1282.721 kb on - strand, within AO353_05805 at 1282.721 kb on - strand, within AO353_05805 at 1282.911 kb on + strand, within AO353_05805 at 1282.964 kb on + strand, within AO353_05805 at 1282.964 kb on + strand, within AO353_05805 at 1282.965 kb on - strand, within AO353_05805 at 1283.008 kb on + strand, within AO353_05805 at 1283.009 kb on - strand, within AO353_05805 at 1283.009 kb on - strand, within AO353_05805 at 1283.009 kb on - strand, within AO353_05805 at 1283.009 kb on - strand, within AO353_05805 at 1283.009 kb on - strand, within AO353_05805 at 1283.009 kb on - strand, within AO353_05805 at 1283.010 kb on + strand, within AO353_05805 at 1283.094 kb on - strand, within AO353_05805 at 1283.094 kb on - strand, within AO353_05805 at 1283.140 kb on + strand, within AO353_05805 at 1283.141 kb on - strand, within AO353_05805 at 1283.191 kb on - strand, within AO353_05805 at 1283.191 kb on - strand, within AO353_05805
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,281,063 + +2.1 1,281,063 + -1.7 1,281,063 + -0.0 1,281,063 + +0.4 1,281,063 + -0.9 1,281,063 + -0.5 1,281,063 + +0.1 1,281,063 + +1.3 1,281,063 + -1.9 1,281,063 + +1.3 1,281,063 + +0.1 1,281,063 + +0.3 1,281,063 + -0.2 1,281,063 + -0.0 1,281,063 + -0.0 1,281,063 + +2.6 1,281,063 + +1.3 1,281,064 - -1.6 1,281,064 - -0.2 1,281,064 - -1.0 1,281,064 - -0.9 1,281,064 - -0.9 1,281,064 - -0.0 1,281,064 - +0.7 1,281,064 - -0.5 1,281,064 - -0.5 1,281,064 - -0.1 1,281,064 - +1.7 1,281,064 - -0.4 1,281,064 - +0.4 1,281,064 - -0.1 1,281,064 - -1.2 1,281,131 + AO353_05795 0.14 +0.7 1,281,131 + AO353_05795 0.14 -1.8 1,281,132 - AO353_05795 0.14 -0.3 1,281,219 + AO353_05795 0.32 -0.9 1,281,219 + AO353_05795 0.32 -0.7 1,281,220 - AO353_05795 0.33 -1.0 1,281,220 - AO353_05795 0.33 +0.3 1,281,279 - AO353_05795 0.45 -1.2 1,281,327 + AO353_05795 0.55 -0.9 1,281,328 - AO353_05795 0.56 +0.3 1,281,328 - AO353_05795 0.56 +0.8 1,281,328 - AO353_05795 0.56 -0.7 1,281,328 - AO353_05795 0.56 +0.0 1,281,342 + AO353_05795 0.59 +0.7 1,281,342 + AO353_05795 0.59 +0.1 1,281,342 + AO353_05795 0.59 -2.6 1,281,342 + AO353_05795 0.59 -1.0 1,281,343 - AO353_05795 0.59 -0.5 1,281,395 - AO353_05795 0.70 +0.3 1,281,422 + AO353_05795 0.76 -0.0 1,281,423 - AO353_05795 0.76 -0.1 1,281,423 - AO353_05795 0.76 -2.0 1,281,468 + AO353_05795 0.85 -1.2 1,281,468 + AO353_05795 0.85 -0.7 1,281,468 + AO353_05795 0.85 -0.3 1,281,468 + AO353_05795 0.85 -1.9 1,281,468 + AO353_05795 0.85 -2.3 1,281,468 + AO353_05795 0.85 -0.5 1,281,468 + AO353_05795 0.85 -0.6 1,281,469 - AO353_05795 0.86 +0.7 1,281,469 - AO353_05795 0.86 +0.3 1,281,469 - AO353_05795 0.86 -0.0 1,281,469 - AO353_05795 0.86 -0.2 1,281,470 + AO353_05795 0.86 -0.2 1,281,471 - AO353_05795 0.86 -1.5 1,281,471 - AO353_05795 0.86 -1.3 1,281,534 + +2.3 1,281,534 + -1.0 1,281,534 + +0.1 1,281,535 - +1.1 1,281,535 - -0.1 1,281,535 - +0.3 1,281,541 + -0.9 1,281,541 + +0.5 1,281,541 + -0.0 1,281,541 + -0.5 1,281,542 - -1.2 1,281,542 - +0.1 1,281,542 - -0.6 1,281,586 + +1.3 1,281,587 - -1.0 1,281,587 - -0.1 1,281,651 - -0.2 1,281,652 + +0.5 1,281,652 + +0.1 1,281,652 + +1.1 1,281,652 + -0.6 1,281,652 + -1.5 1,281,652 + +0.3 1,281,652 + -0.5 1,281,652 + -1.3 1,281,652 + -1.4 1,281,652 + +1.7 1,281,652 + -0.8 1,281,652 + -0.6 1,281,652 + -0.3 1,281,652 + +0.3 1,281,652 + +0.0 1,281,652 + -2.2 1,281,652 + -0.9 1,281,652 + -0.3 1,281,652 + -1.8 1,281,653 - -0.4 1,281,653 - -0.3 1,281,653 - -0.2 1,281,653 - -1.6 1,281,653 - -0.5 1,281,653 - +0.6 1,281,653 - -0.3 1,281,653 - -1.3 1,281,653 - +0.4 1,281,653 - +0.5 1,281,653 - -2.2 1,281,653 - +0.9 1,281,675 + -1.4 1,281,675 + +0.1 1,281,676 - +0.9 1,281,676 - -0.4 1,281,676 - -0.4 1,281,741 + +0.3 1,281,741 + -1.0 1,281,742 - -0.4 1,281,742 - +0.1 1,281,742 - +0.1 1,281,742 - -0.7 1,281,803 - -1.0 1,281,803 - -0.5 1,281,811 + -1.5 1,281,811 + -0.3 1,281,812 - -0.2 1,281,846 - +2.7 1,281,846 - +0.7 1,281,873 + +0.7 1,281,873 + +0.7 1,281,873 + -1.2 1,281,874 - -0.3 1,281,874 - -0.7 1,281,886 + -0.7 1,281,887 - -0.9 1,281,887 - -0.5 1,281,887 - -0.2 1,281,887 - -0.9 1,281,887 - -2.3 1,281,887 - +0.9 1,281,916 - +1.3 1,281,947 + -1.0 1,281,948 - -2.9 1,281,951 + -0.0 1,281,951 + -0.3 1,281,951 + -1.7 1,281,951 + +0.6 1,281,951 + -0.0 1,281,952 - +0.3 1,281,952 - -1.9 1,281,989 + -0.9 1,281,989 + +1.3 1,281,989 + +0.7 1,281,989 + +1.0 1,281,989 + +0.3 1,281,989 + -0.1 1,281,989 + +1.4 1,281,989 + -1.5 1,281,990 - -0.9 1,281,990 - -1.3 1,281,990 - +0.8 1,282,020 - +2.1 1,282,033 - +0.1 1,282,042 - -0.5 1,282,042 - -0.5 1,282,105 + AO353_05800 0.27 -0.2 1,282,105 + AO353_05800 0.27 +0.7 1,282,105 + AO353_05800 0.27 +0.7 1,282,105 + AO353_05800 0.27 -1.2 1,282,105 + AO353_05800 0.27 +0.3 1,282,105 + AO353_05800 0.27 -0.7 1,282,121 + AO353_05800 0.34 -1.7 1,282,121 + AO353_05800 0.34 -0.5 1,282,142 + AO353_05800 0.43 +0.3 1,282,142 + AO353_05800 0.43 -0.3 1,282,142 + AO353_05800 0.43 -1.2 1,282,142 + AO353_05800 0.43 -0.7 1,282,142 + AO353_05800 0.43 -0.0 1,282,143 - AO353_05800 0.43 -0.4 1,282,143 - AO353_05800 0.43 -1.2 1,282,157 + AO353_05800 0.49 -0.7 1,282,157 + AO353_05800 0.49 -1.9 1,282,157 + AO353_05800 0.49 -2.1 1,282,158 - AO353_05800 0.50 -1.8 1,282,158 - AO353_05800 0.50 -0.4 1,282,168 + AO353_05800 0.54 -0.5 1,282,169 - AO353_05800 0.54 -0.5 1,282,280 + -0.5 1,282,280 + +0.2 1,282,280 + -1.2 1,282,280 + -1.0 1,282,280 + -1.0 1,282,281 - +1.3 1,282,281 - -0.3 1,282,281 - -0.3 1,282,281 - -1.5 1,282,281 - -0.9 1,282,345 + +1.3 1,282,345 + +0.5 1,282,346 - +1.0 1,282,346 - +1.0 1,282,346 - -1.0 1,282,360 + -0.6 1,282,360 + +2.3 1,282,360 + -1.6 1,282,361 - +0.5 1,282,361 - +0.9 1,282,361 - -1.1 1,282,395 + +0.5 1,282,395 + -0.9 1,282,395 + -0.2 1,282,395 + -0.3 1,282,395 + -0.5 1,282,395 + +0.6 1,282,395 + -0.6 1,282,395 + +0.2 1,282,395 + -0.5 1,282,395 + -0.7 1,282,396 - +0.3 1,282,396 - +0.1 1,282,396 - +1.1 1,282,396 - +0.8 1,282,396 - -0.6 1,282,396 - -0.8 1,282,396 - +0.7 1,282,396 - -1.4 1,282,396 - -0.2 1,282,396 - +0.6 1,282,396 - -1.4 1,282,396 - +0.3 1,282,396 - -0.3 1,282,396 - +0.4 1,282,528 + AO353_05805 0.15 -0.8 1,282,528 + AO353_05805 0.15 -1.9 1,282,528 + AO353_05805 0.15 +1.3 1,282,528 + AO353_05805 0.15 +0.7 1,282,528 + +1.3 1,282,528 + AO353_05805 0.15 +0.1 1,282,528 + AO353_05805 0.15 +0.6 1,282,528 + AO353_05805 0.15 -0.1 1,282,528 + AO353_05805 0.15 +0.4 1,282,528 + AO353_05805 0.15 -0.2 1,282,528 + AO353_05805 0.15 -0.7 1,282,528 + AO353_05805 0.15 +2.7 1,282,528 + AO353_05805 0.15 -0.3 1,282,528 + AO353_05805 0.15 -1.1 1,282,528 + AO353_05805 0.15 -0.4 1,282,528 + AO353_05805 0.15 -0.3 1,282,529 - AO353_05805 0.15 -1.0 1,282,529 - AO353_05805 0.15 -0.2 1,282,529 - AO353_05805 0.15 +0.1 1,282,529 - AO353_05805 0.15 -0.2 1,282,529 - AO353_05805 0.15 +0.1 1,282,529 - AO353_05805 0.15 +0.3 1,282,529 - AO353_05805 0.15 -0.7 1,282,529 - AO353_05805 0.15 +0.3 1,282,590 - AO353_05805 0.19 -0.2 1,282,604 + AO353_05805 0.20 +0.4 1,282,605 - AO353_05805 0.20 -0.0 1,282,630 + AO353_05805 0.22 -1.1 1,282,630 + AO353_05805 0.22 +2.3 1,282,662 + AO353_05805 0.24 -1.2 1,282,662 + AO353_05805 0.24 +1.0 1,282,663 - AO353_05805 0.24 -0.9 1,282,717 + AO353_05805 0.27 -0.0 1,282,721 - AO353_05805 0.27 -0.9 1,282,721 - AO353_05805 0.27 +1.2 1,282,911 + AO353_05805 0.39 +1.1 1,282,964 + AO353_05805 0.42 +0.7 1,282,964 + AO353_05805 0.42 -1.0 1,282,965 - AO353_05805 0.42 -0.9 1,283,008 + AO353_05805 0.45 +2.6 1,283,009 - AO353_05805 0.45 +0.3 1,283,009 - AO353_05805 0.45 +0.3 1,283,009 - AO353_05805 0.45 +0.7 1,283,009 - AO353_05805 0.45 -0.3 1,283,009 - AO353_05805 0.45 +0.9 1,283,009 - AO353_05805 0.45 +1.3 1,283,010 + AO353_05805 0.45 -1.3 1,283,094 - AO353_05805 0.50 +0.7 1,283,094 - AO353_05805 0.50 -1.6 1,283,140 + AO353_05805 0.53 -1.6 1,283,141 - AO353_05805 0.53 -0.1 1,283,191 - AO353_05805 0.56 -1.7 1,283,191 - AO353_05805 0.56 +0.4
Or see this region's nucleotide sequence