Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04805 and AO353_04810 are separated by 197 nucleotides AO353_04810 and AO353_04815 are separated by 225 nucleotides AO353_04815 and AO353_04820 are separated by 151 nucleotides
AO353_04805: AO353_04805 - hypothetical protein, at 1,062,148 to 1,063,419
_04805
AO353_04810: AO353_04810 - hypothetical protein, at 1,063,617 to 1,064,015
_04810
AO353_04815: AO353_04815 - hypothetical protein, at 1,064,241 to 1,064,612
_04815
AO353_04820: AO353_04820 - hypothetical protein, at 1,064,764 to 1,065,507
_04820
Position (kb)
1063
1064
1065 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1062.685 kb on + strand, within AO353_04805 at 1062.685 kb on + strand, within AO353_04805 at 1062.685 kb on + strand, within AO353_04805 at 1062.686 kb on - strand, within AO353_04805 at 1062.686 kb on - strand, within AO353_04805 at 1062.699 kb on + strand, within AO353_04805 at 1062.699 kb on + strand, within AO353_04805 at 1062.700 kb on - strand, within AO353_04805 at 1062.700 kb on - strand, within AO353_04805 at 1062.747 kb on + strand, within AO353_04805 at 1062.748 kb on - strand, within AO353_04805 at 1062.759 kb on + strand, within AO353_04805 at 1062.759 kb on + strand, within AO353_04805 at 1062.760 kb on - strand, within AO353_04805 at 1062.840 kb on + strand, within AO353_04805 at 1062.840 kb on + strand, within AO353_04805 at 1062.840 kb on + strand, within AO353_04805 at 1062.840 kb on + strand, within AO353_04805 at 1062.840 kb on + strand, within AO353_04805 at 1062.840 kb on + strand, within AO353_04805 at 1062.841 kb on - strand, within AO353_04805 at 1062.841 kb on - strand, within AO353_04805 at 1062.889 kb on + strand, within AO353_04805 at 1062.889 kb on + strand, within AO353_04805 at 1062.889 kb on + strand, within AO353_04805 at 1062.890 kb on - strand, within AO353_04805 at 1062.890 kb on - strand, within AO353_04805 at 1062.890 kb on - strand, within AO353_04805 at 1062.890 kb on - strand, within AO353_04805 at 1062.901 kb on + strand, within AO353_04805 at 1062.902 kb on - strand, within AO353_04805 at 1062.924 kb on + strand, within AO353_04805 at 1062.981 kb on + strand at 1062.981 kb on + strand, within AO353_04805 at 1062.981 kb on + strand, within AO353_04805 at 1063.001 kb on + strand, within AO353_04805 at 1063.001 kb on + strand, within AO353_04805 at 1063.001 kb on + strand, within AO353_04805 at 1063.001 kb on + strand, within AO353_04805 at 1063.002 kb on - strand, within AO353_04805 at 1063.002 kb on - strand, within AO353_04805 at 1063.002 kb on - strand, within AO353_04805 at 1063.002 kb on - strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.228 kb on + strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.229 kb on - strand, within AO353_04805 at 1063.230 kb on + strand, within AO353_04805 at 1063.240 kb on + strand, within AO353_04805 at 1063.241 kb on - strand, within AO353_04805 at 1063.328 kb on + strand at 1063.328 kb on + strand at 1063.328 kb on + strand at 1063.328 kb on + strand at 1063.329 kb on - strand at 1063.329 kb on - strand at 1063.329 kb on - strand at 1063.329 kb on - strand at 1063.351 kb on - strand at 1063.379 kb on + strand at 1063.379 kb on + strand at 1063.379 kb on + strand at 1063.380 kb on - strand at 1063.380 kb on - strand at 1063.380 kb on - strand at 1063.380 kb on - strand at 1063.403 kb on - strand at 1063.461 kb on + strand at 1063.461 kb on + strand at 1063.461 kb on + strand at 1063.462 kb on - strand at 1063.462 kb on - strand at 1063.483 kb on - strand at 1063.483 kb on - strand at 1063.501 kb on - strand at 1063.531 kb on + strand at 1063.586 kb on + strand at 1063.587 kb on - strand at 1063.626 kb on + strand at 1063.635 kb on + strand at 1063.636 kb on - strand at 1063.636 kb on - strand at 1063.706 kb on - strand, within AO353_04810 at 1063.891 kb on - strand, within AO353_04810 at 1063.891 kb on - strand, within AO353_04810 at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.001 kb on + strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.002 kb on - strand at 1064.061 kb on + strand at 1064.061 kb on + strand at 1064.062 kb on - strand at 1064.062 kb on - strand at 1064.062 kb on - strand at 1064.062 kb on - strand at 1064.062 kb on - strand at 1064.070 kb on + strand at 1064.070 kb on + strand at 1064.070 kb on + strand at 1064.070 kb on + strand at 1064.071 kb on - strand at 1064.071 kb on - strand at 1064.194 kb on + strand at 1064.210 kb on + strand at 1064.210 kb on + strand at 1064.210 kb on + strand at 1064.210 kb on + strand at 1064.210 kb on + strand at 1064.210 kb on + strand at 1064.210 kb on + strand at 1064.210 kb on + strand at 1064.211 kb on - strand at 1064.222 kb on - strand at 1064.222 kb on - strand at 1064.222 kb on - strand at 1064.222 kb on - strand at 1064.222 kb on - strand at 1064.222 kb on - strand at 1064.222 kb on - strand at 1064.226 kb on + strand at 1064.226 kb on + strand at 1064.226 kb on + strand at 1064.226 kb on + strand at 1064.226 kb on + strand at 1064.226 kb on + strand at 1064.226 kb on + strand at 1064.227 kb on - strand at 1064.227 kb on - strand at 1064.227 kb on - strand at 1064.227 kb on - strand at 1064.227 kb on - strand at 1064.227 kb on - strand at 1064.227 kb on - strand at 1064.246 kb on + strand at 1064.246 kb on + strand at 1064.247 kb on - strand at 1064.247 kb on - strand at 1064.253 kb on - strand at 1064.437 kb on + strand, within AO353_04815 at 1064.610 kb on + strand at 1064.668 kb on + strand at 1064.668 kb on + strand at 1064.669 kb on - strand at 1064.669 kb on - strand at 1064.669 kb on - strand at 1064.669 kb on - strand at 1064.693 kb on + strand at 1064.693 kb on + strand at 1064.693 kb on + strand at 1064.694 kb on - strand at 1064.699 kb on + strand at 1064.699 kb on + strand at 1064.699 kb on + strand at 1064.699 kb on + strand at 1064.700 kb on - strand at 1064.700 kb on - strand at 1064.700 kb on - strand at 1064.700 kb on - strand at 1064.700 kb on - strand at 1064.700 kb on - strand at 1064.788 kb on - strand at 1064.860 kb on + strand, within AO353_04820 at 1064.860 kb on + strand, within AO353_04820 at 1064.860 kb on + strand, within AO353_04820 at 1064.861 kb on - strand, within AO353_04820 at 1064.861 kb on - strand, within AO353_04820 at 1064.861 kb on - strand, within AO353_04820 at 1064.861 kb on - strand, within AO353_04820 at 1064.879 kb on + strand, within AO353_04820 at 1064.879 kb on + strand, within AO353_04820 at 1064.879 kb on + strand, within AO353_04820 at 1064.879 kb on + strand, within AO353_04820 at 1064.879 kb on + strand, within AO353_04820 at 1064.879 kb on + strand, within AO353_04820 at 1064.879 kb on + strand, within AO353_04820 at 1064.879 kb on + strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.880 kb on - strand, within AO353_04820 at 1064.893 kb on - strand, within AO353_04820 at 1064.922 kb on + strand, within AO353_04820 at 1064.958 kb on - strand, within AO353_04820 at 1064.978 kb on - strand, within AO353_04820
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 1,062,685 + AO353_04805 0.42 -0.9 1,062,685 + AO353_04805 0.42 +0.5 1,062,685 + AO353_04805 0.42 -0.5 1,062,686 - AO353_04805 0.42 +0.3 1,062,686 - AO353_04805 0.42 -0.3 1,062,699 + AO353_04805 0.43 -2.2 1,062,699 + AO353_04805 0.43 +0.1 1,062,700 - AO353_04805 0.43 +1.6 1,062,700 - AO353_04805 0.43 +0.1 1,062,747 + AO353_04805 0.47 -2.2 1,062,748 - AO353_04805 0.47 +1.2 1,062,759 + AO353_04805 0.48 +1.1 1,062,759 + AO353_04805 0.48 -0.9 1,062,760 - AO353_04805 0.48 -2.2 1,062,840 + AO353_04805 0.54 +0.8 1,062,840 + AO353_04805 0.54 -1.7 1,062,840 + AO353_04805 0.54 +1.2 1,062,840 + AO353_04805 0.54 +0.4 1,062,840 + AO353_04805 0.54 -0.8 1,062,840 + AO353_04805 0.54 -0.8 1,062,841 - AO353_04805 0.54 +0.8 1,062,841 - AO353_04805 0.54 -0.1 1,062,889 + AO353_04805 0.58 -1.6 1,062,889 + AO353_04805 0.58 -0.5 1,062,889 + AO353_04805 0.58 -1.1 1,062,890 - AO353_04805 0.58 +0.1 1,062,890 - AO353_04805 0.58 -0.5 1,062,890 - AO353_04805 0.58 -0.7 1,062,890 - AO353_04805 0.58 +0.0 1,062,901 + AO353_04805 0.59 +2.2 1,062,902 - AO353_04805 0.59 +1.9 1,062,924 + AO353_04805 0.61 +0.4 1,062,981 + +2.2 1,062,981 + AO353_04805 0.65 -0.2 1,062,981 + AO353_04805 0.65 +1.0 1,063,001 + AO353_04805 0.67 +0.2 1,063,001 + AO353_04805 0.67 -0.6 1,063,001 + AO353_04805 0.67 +0.7 1,063,001 + AO353_04805 0.67 -0.1 1,063,002 - AO353_04805 0.67 +0.3 1,063,002 - AO353_04805 0.67 +0.8 1,063,002 - AO353_04805 0.67 +1.0 1,063,002 - AO353_04805 0.67 -1.4 1,063,228 + AO353_04805 0.85 +0.8 1,063,228 + AO353_04805 0.85 +1.6 1,063,228 + AO353_04805 0.85 -1.1 1,063,228 + AO353_04805 0.85 +2.2 1,063,228 + AO353_04805 0.85 -0.9 1,063,228 + AO353_04805 0.85 -0.1 1,063,228 + AO353_04805 0.85 +1.4 1,063,228 + AO353_04805 0.85 -0.9 1,063,228 + AO353_04805 0.85 +0.9 1,063,228 + AO353_04805 0.85 -0.9 1,063,228 + AO353_04805 0.85 +0.1 1,063,228 + AO353_04805 0.85 +0.4 1,063,228 + AO353_04805 0.85 +0.2 1,063,228 + AO353_04805 0.85 -0.5 1,063,228 + AO353_04805 0.85 -0.9 1,063,229 - AO353_04805 0.85 +1.0 1,063,229 - AO353_04805 0.85 +0.7 1,063,229 - AO353_04805 0.85 +3.2 1,063,229 - AO353_04805 0.85 +0.1 1,063,229 - AO353_04805 0.85 +0.5 1,063,229 - AO353_04805 0.85 +0.1 1,063,229 - AO353_04805 0.85 +0.6 1,063,229 - AO353_04805 0.85 +0.9 1,063,229 - AO353_04805 0.85 +0.6 1,063,229 - AO353_04805 0.85 -0.8 1,063,229 - AO353_04805 0.85 -0.4 1,063,229 - AO353_04805 0.85 -0.8 1,063,229 - AO353_04805 0.85 -0.9 1,063,229 - AO353_04805 0.85 -1.4 1,063,229 - AO353_04805 0.85 -0.4 1,063,230 + AO353_04805 0.85 +0.8 1,063,240 + AO353_04805 0.86 +0.2 1,063,241 - AO353_04805 0.86 -0.9 1,063,328 + +0.2 1,063,328 + +0.1 1,063,328 + +0.2 1,063,328 + +0.2 1,063,329 - +0.8 1,063,329 - -1.0 1,063,329 - +0.8 1,063,329 - +0.6 1,063,351 - -0.8 1,063,379 + -0.6 1,063,379 + -1.9 1,063,379 + +1.5 1,063,380 - +0.5 1,063,380 - +0.3 1,063,380 - -1.1 1,063,380 - +0.6 1,063,403 - +0.0 1,063,461 + +0.3 1,063,461 + -0.4 1,063,461 + -0.9 1,063,462 - -2.3 1,063,462 - -1.1 1,063,483 - +0.7 1,063,483 - +0.1 1,063,501 - +0.9 1,063,531 + -0.1 1,063,586 + -0.9 1,063,587 - +0.8 1,063,626 + -0.8 1,063,635 + +0.6 1,063,636 - -0.3 1,063,636 - +1.1 1,063,706 - AO353_04810 0.22 +0.6 1,063,891 - AO353_04810 0.69 -1.7 1,063,891 - AO353_04810 0.69 +0.9 1,064,001 + -0.4 1,064,001 + -0.4 1,064,001 + -0.9 1,064,001 + +0.7 1,064,001 + +0.6 1,064,001 + -2.4 1,064,001 + -0.5 1,064,001 + -0.5 1,064,001 + -0.9 1,064,001 + +0.4 1,064,001 + +0.7 1,064,001 + -0.3 1,064,001 + -2.4 1,064,001 + +1.0 1,064,002 - +0.8 1,064,002 - +0.6 1,064,002 - +0.3 1,064,002 - -0.5 1,064,002 - -0.2 1,064,002 - -0.6 1,064,002 - +2.8 1,064,002 - -0.6 1,064,002 - +0.2 1,064,002 - +0.8 1,064,002 - +1.1 1,064,002 - -1.0 1,064,002 - +0.5 1,064,002 - +1.2 1,064,002 - -0.9 1,064,002 - -0.3 1,064,061 + -0.8 1,064,061 + -1.7 1,064,062 - -1.0 1,064,062 - -0.5 1,064,062 - +0.0 1,064,062 - +0.2 1,064,062 - +0.1 1,064,070 + +0.8 1,064,070 + -0.4 1,064,070 + -0.4 1,064,070 + +2.8 1,064,071 - -0.8 1,064,071 - +1.2 1,064,194 + -0.2 1,064,210 + -0.8 1,064,210 + -1.8 1,064,210 + -0.0 1,064,210 + -0.8 1,064,210 + -0.3 1,064,210 + +0.2 1,064,210 + -0.5 1,064,210 + -0.8 1,064,211 - -0.6 1,064,222 - -1.9 1,064,222 - -0.6 1,064,222 - +0.5 1,064,222 - +0.1 1,064,222 - +0.5 1,064,222 - +0.6 1,064,222 - -0.9 1,064,226 + -0.8 1,064,226 + +1.2 1,064,226 + -0.9 1,064,226 + -0.8 1,064,226 + -1.1 1,064,226 + +0.1 1,064,226 + -0.5 1,064,227 - -0.4 1,064,227 - -1.0 1,064,227 - -1.5 1,064,227 - +0.3 1,064,227 - -1.5 1,064,227 - +0.0 1,064,227 - -0.5 1,064,246 + +1.8 1,064,246 + +0.5 1,064,247 - -1.2 1,064,247 - -0.1 1,064,253 - -0.6 1,064,437 + AO353_04815 0.53 +0.7 1,064,610 + -0.1 1,064,668 + -1.3 1,064,668 + -0.4 1,064,669 - -0.3 1,064,669 - -0.1 1,064,669 - -0.6 1,064,669 - +0.6 1,064,693 + +1.0 1,064,693 + +0.8 1,064,693 + -1.3 1,064,694 - -0.4 1,064,699 + -0.5 1,064,699 + -0.1 1,064,699 + -0.8 1,064,699 + -1.5 1,064,700 - -0.3 1,064,700 - +0.1 1,064,700 - -0.9 1,064,700 - -0.6 1,064,700 - -0.4 1,064,700 - -2.2 1,064,788 - -0.2 1,064,860 + AO353_04820 0.13 +1.0 1,064,860 + AO353_04820 0.13 -1.2 1,064,860 + AO353_04820 0.13 -0.8 1,064,861 - AO353_04820 0.13 -1.1 1,064,861 - AO353_04820 0.13 +0.4 1,064,861 - AO353_04820 0.13 +0.2 1,064,861 - AO353_04820 0.13 -0.8 1,064,879 + AO353_04820 0.15 -0.7 1,064,879 + AO353_04820 0.15 +0.0 1,064,879 + AO353_04820 0.15 -0.5 1,064,879 + AO353_04820 0.15 -0.3 1,064,879 + AO353_04820 0.15 -0.8 1,064,879 + AO353_04820 0.15 -1.5 1,064,879 + AO353_04820 0.15 +0.8 1,064,879 + AO353_04820 0.15 +0.5 1,064,880 - AO353_04820 0.16 +0.1 1,064,880 - AO353_04820 0.16 +0.4 1,064,880 - AO353_04820 0.16 -1.5 1,064,880 - AO353_04820 0.16 +1.2 1,064,880 - AO353_04820 0.16 +0.0 1,064,880 - AO353_04820 0.16 -0.4 1,064,880 - AO353_04820 0.16 +0.5 1,064,880 - AO353_04820 0.16 -1.1 1,064,880 - AO353_04820 0.16 -0.2 1,064,880 - AO353_04820 0.16 -0.8 1,064,880 - AO353_04820 0.16 -1.5 1,064,880 - AO353_04820 0.16 -0.6 1,064,880 - AO353_04820 0.16 -0.4 1,064,880 - AO353_04820 0.16 -1.1 1,064,880 - AO353_04820 0.16 -0.8 1,064,880 - AO353_04820 0.16 -0.5 1,064,893 - AO353_04820 0.17 -1.9 1,064,922 + AO353_04820 0.21 +0.3 1,064,958 - AO353_04820 0.26 +0.6 1,064,978 - AO353_04820 0.29 +1.6
Or see this region's nucleotide sequence