Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04515 and AO353_04520 are separated by 5 nucleotides AO353_04520 and AO353_04525 are separated by 171 nucleotides
AO353_04515: AO353_04515 - signal peptidase, at 973,972 to 974,826
_04515
AO353_04520: AO353_04520 - elongation factor 4, at 974,832 to 976,631
_04520
AO353_04525: AO353_04525 - LPS export ABC transporter permease LptG, at 976,803 to 977,864
_04525
Position (kb)
974
975
976
977 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 973.843 kb on - strand at 973.974 kb on - strand at 973.974 kb on - strand at 973.974 kb on - strand at 973.974 kb on - strand at 973.974 kb on - strand at 973.974 kb on - strand at 973.974 kb on - strand at 973.974 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.827 kb on - strand at 974.834 kb on - strand at 974.834 kb on - strand at 974.834 kb on - strand at 974.834 kb on - strand at 974.834 kb on - strand at 974.834 kb on - strand at 974.838 kb on - strand at 974.838 kb on - strand at 974.838 kb on - strand at 974.838 kb on - strand at 974.838 kb on - strand at 975.169 kb on - strand, within AO353_04520 at 975.296 kb on - strand, within AO353_04520 at 975.438 kb on - strand, within AO353_04520 at 975.438 kb on - strand, within AO353_04520 at 975.647 kb on - strand, within AO353_04520 at 975.737 kb on - strand, within AO353_04520 at 975.737 kb on - strand, within AO353_04520 at 975.858 kb on + strand, within AO353_04520 at 975.858 kb on + strand, within AO353_04520 at 975.859 kb on - strand, within AO353_04520 at 976.015 kb on + strand, within AO353_04520 at 976.194 kb on + strand, within AO353_04520 at 976.195 kb on - strand, within AO353_04520 at 976.274 kb on - strand, within AO353_04520 at 976.367 kb on - strand, within AO353_04520 at 976.419 kb on - strand, within AO353_04520 at 976.435 kb on + strand, within AO353_04520 at 976.436 kb on - strand, within AO353_04520 at 976.436 kb on - strand, within AO353_04520 at 976.436 kb on - strand, within AO353_04520 at 976.436 kb on - strand, within AO353_04520 at 976.439 kb on - strand, within AO353_04520 at 976.439 kb on - strand, within AO353_04520 at 976.661 kb on - strand at 976.695 kb on + strand at 976.695 kb on + strand at 976.695 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 973,843 - +0.9 973,974 - -1.3 973,974 - +1.3 973,974 - -0.6 973,974 - -0.6 973,974 - +0.6 973,974 - -0.2 973,974 - -0.5 973,974 - +0.2 974,827 - +0.8 974,827 - -1.8 974,827 - -0.1 974,827 - +1.8 974,827 - +0.0 974,827 - -0.1 974,827 - -0.3 974,827 - -0.8 974,827 - -0.7 974,827 - -0.3 974,827 - -0.1 974,834 - -1.0 974,834 - +0.2 974,834 - +3.8 974,834 - -1.2 974,834 - -1.0 974,834 - -0.8 974,838 - +1.2 974,838 - -0.3 974,838 - +1.2 974,838 - -0.1 974,838 - +0.2 975,169 - AO353_04520 0.19 -1.0 975,296 - AO353_04520 0.26 -0.4 975,438 - AO353_04520 0.34 +0.6 975,438 - AO353_04520 0.34 -0.8 975,647 - AO353_04520 0.45 -1.0 975,737 - AO353_04520 0.50 -0.1 975,737 - AO353_04520 0.50 +0.4 975,858 + AO353_04520 0.57 -0.8 975,858 + AO353_04520 0.57 -0.1 975,859 - AO353_04520 0.57 +0.6 976,015 + AO353_04520 0.66 -2.1 976,194 + AO353_04520 0.76 -1.2 976,195 - AO353_04520 0.76 +0.6 976,274 - AO353_04520 0.80 -1.8 976,367 - AO353_04520 0.85 +1.1 976,419 - AO353_04520 0.88 -0.1 976,435 + AO353_04520 0.89 -0.6 976,436 - AO353_04520 0.89 +0.0 976,436 - AO353_04520 0.89 -0.4 976,436 - AO353_04520 0.89 +0.2 976,436 - AO353_04520 0.89 -0.4 976,439 - AO353_04520 0.89 -0.4 976,439 - AO353_04520 0.89 +0.5 976,661 - +0.3 976,695 + +0.7 976,695 + -0.5 976,695 + -1.0
Or see this region's nucleotide sequence