Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03580 and AO353_03585 are separated by 0 nucleotides AO353_03585 and AO353_03590 are separated by 118 nucleotides AO353_03590 and AO353_03595 are separated by 203 nucleotides
AO353_03580: AO353_03580 - ATP-dependent DNA helicase RuvB, at 764,872 to 765,933
_03580
AO353_03585: AO353_03585 - ATP-dependent DNA helicase RuvA, at 765,934 to 766,542
_03585
AO353_03590: AO353_03590 - crossover junction endodeoxyribonuclease RuvC, at 766,661 to 767,185
_03590
AO353_03595: AO353_03595 - hypothetical protein, at 767,389 to 768,135
_03595
Position (kb) 766
767
768 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 765.836 kb on + strand at 765.837 kb on - strand at 765.935 kb on + strand at 765.936 kb on - strand at 765.936 kb on - strand at 766.480 kb on + strand, within AO353_03585 at 766.480 kb on + strand, within AO353_03585 at 766.480 kb on + strand, within AO353_03585 at 766.480 kb on + strand, within AO353_03585 at 766.481 kb on - strand, within AO353_03585 at 766.481 kb on - strand, within AO353_03585 at 766.481 kb on - strand, within AO353_03585 at 766.583 kb on + strand at 766.654 kb on + strand at 766.654 kb on + strand at 766.654 kb on + strand at 766.655 kb on - strand at 766.831 kb on + strand, within AO353_03590 at 766.882 kb on - strand, within AO353_03590 at 766.882 kb on - strand, within AO353_03590 at 767.080 kb on + strand, within AO353_03590 at 767.103 kb on + strand, within AO353_03590 at 767.103 kb on + strand, within AO353_03590 at 767.104 kb on - strand, within AO353_03590 at 767.129 kb on + strand, within AO353_03590 at 767.129 kb on + strand, within AO353_03590 at 767.129 kb on + strand, within AO353_03590 at 767.129 kb on + strand, within AO353_03590 at 767.177 kb on + strand at 767.178 kb on - strand at 767.186 kb on - strand at 767.201 kb on - strand at 767.296 kb on + strand at 767.297 kb on - strand at 767.435 kb on + strand at 767.435 kb on + strand at 767.584 kb on - strand, within AO353_03595 at 767.595 kb on - strand, within AO353_03595 at 767.742 kb on - strand, within AO353_03595 at 767.742 kb on - strand, within AO353_03595 at 767.742 kb on - strand, within AO353_03595 at 767.876 kb on + strand, within AO353_03595 at 767.876 kb on + strand, within AO353_03595 at 767.876 kb on + strand, within AO353_03595 at 767.877 kb on - strand, within AO353_03595 at 767.877 kb on - strand, within AO353_03595 at 767.877 kb on - strand, within AO353_03595 at 768.135 kb on + strand at 768.135 kb on + strand at 768.135 kb on + strand at 768.135 kb on + strand at 768.156 kb on + strand at 768.157 kb on - strand at 768.170 kb on - strand at 768.171 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 765,836 + -2.1 765,837 - +0.5 765,935 + -0.2 765,936 - +1.1 765,936 - +1.5 766,480 + AO353_03585 0.90 +0.3 766,480 + AO353_03585 0.90 +1.1 766,480 + AO353_03585 0.90 -0.9 766,480 + AO353_03585 0.90 -0.7 766,481 - AO353_03585 0.90 +0.4 766,481 - AO353_03585 0.90 -0.9 766,481 - AO353_03585 0.90 -0.9 766,583 + -0.4 766,654 + -0.5 766,654 + -1.4 766,654 + +1.1 766,655 - +0.2 766,831 + AO353_03590 0.32 -0.9 766,882 - AO353_03590 0.42 +2.1 766,882 - AO353_03590 0.42 +0.4 767,080 + AO353_03590 0.80 -2.1 767,103 + AO353_03590 0.84 +0.1 767,103 + AO353_03590 0.84 +0.7 767,104 - AO353_03590 0.84 -1.2 767,129 + AO353_03590 0.89 -1.1 767,129 + AO353_03590 0.89 +1.1 767,129 + AO353_03590 0.89 -1.7 767,129 + AO353_03590 0.89 -1.7 767,177 + -0.7 767,178 - -0.9 767,186 - -0.5 767,201 - -1.5 767,296 + +3.7 767,297 - +1.5 767,435 + +0.1 767,435 + +0.1 767,584 - AO353_03595 0.26 -0.7 767,595 - AO353_03595 0.28 +0.5 767,742 - AO353_03595 0.47 +0.7 767,742 - AO353_03595 0.47 -1.0 767,742 - AO353_03595 0.47 -0.5 767,876 + AO353_03595 0.65 -0.5 767,876 + AO353_03595 0.65 -0.5 767,876 + AO353_03595 0.65 +0.9 767,877 - AO353_03595 0.65 +0.8 767,877 - AO353_03595 0.65 -1.8 767,877 - AO353_03595 0.65 -0.7 768,135 + -1.4 768,135 + -0.5 768,135 + +0.1 768,135 + -1.4 768,156 + -1.4 768,157 - +0.1 768,170 - -0.1 768,171 + +0.5
Or see this region's nucleotide sequence