Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_03480

Experiment: L-Aspartic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_03475 and AO353_03480 are separated by 221 nucleotidesAO353_03480 and AO353_03485 are separated by 57 nucleotidesAO353_03485 and AO353_03490 are separated by 182 nucleotides AO353_03475: AO353_03475 - ornithine carbamoyltransferase, at 743,081 to 744,091 _03475 AO353_03480: AO353_03480 - carbamate kinase, at 744,313 to 745,242 _03480 AO353_03485: AO353_03485 - acetyl-CoA carboxylase, at 745,300 to 745,656 _03485 AO353_03490: AO353_03490 - Fis family transcriptional regulator, at 745,839 to 747,347 _03490 Position (kb) 744 745 746Strain fitness (log2 ratio) -2 -1 0 1 2 3at 743.555 kb on + strand, within AO353_03475at 743.556 kb on - strand, within AO353_03475at 743.556 kb on - strand, within AO353_03475at 743.556 kb on - strand, within AO353_03475at 743.561 kb on + strand, within AO353_03475at 743.561 kb on + strand, within AO353_03475at 743.561 kb on + strand, within AO353_03475at 743.561 kb on + strand, within AO353_03475at 743.562 kb on - strand, within AO353_03475at 743.562 kb on - strand, within AO353_03475at 743.562 kb on - strand, within AO353_03475at 743.562 kb on - strand, within AO353_03475at 743.562 kb on - strand, within AO353_03475at 743.562 kb on - strand, within AO353_03475at 743.562 kb on - strand, within AO353_03475at 743.579 kb on + strand, within AO353_03475at 743.631 kb on + strand, within AO353_03475at 743.631 kb on + strand, within AO353_03475at 743.631 kb on + strand, within AO353_03475at 743.631 kb on + strand, within AO353_03475at 743.632 kb on - strand, within AO353_03475at 743.632 kb on - strand, within AO353_03475at 743.632 kb on - strand, within AO353_03475at 743.632 kb on - strand, within AO353_03475at 743.632 kb on - strand, within AO353_03475at 743.632 kb on - strand, within AO353_03475at 743.719 kb on + strand, within AO353_03475at 743.841 kb on - strand, within AO353_03475at 743.854 kb on + strand, within AO353_03475at 743.986 kb on - strand, within AO353_03475at 743.986 kb on - strand, within AO353_03475at 743.997 kb on + strandat 743.997 kb on + strandat 743.997 kb on + strandat 743.998 kb on - strandat 743.998 kb on - strandat 744.089 kb on + strandat 744.089 kb on + strandat 744.089 kb on + strandat 744.089 kb on + strandat 744.089 kb on + strandat 744.089 kb on + strandat 744.089 kb on + strandat 744.089 kb on + strandat 744.089 kb on + strandat 744.090 kb on - strandat 744.090 kb on - strandat 744.090 kb on - strandat 744.090 kb on - strandat 744.090 kb on - strandat 744.090 kb on - strandat 744.090 kb on - strandat 744.180 kb on + strandat 744.180 kb on + strandat 744.214 kb on + strandat 744.280 kb on + strandat 744.312 kb on + strandat 744.312 kb on + strandat 744.313 kb on - strandat 744.393 kb on + strandat 744.502 kb on + strand, within AO353_03480at 744.502 kb on + strand, within AO353_03480at 744.503 kb on - strand, within AO353_03480at 744.503 kb on - strand, within AO353_03480at 744.503 kb on - strand, within AO353_03480at 744.565 kb on + strandat 744.565 kb on + strand, within AO353_03480at 744.566 kb on - strand, within AO353_03480at 744.694 kb on + strand, within AO353_03480at 744.694 kb on + strand, within AO353_03480at 744.694 kb on + strand, within AO353_03480at 744.695 kb on - strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.883 kb on + strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 744.884 kb on - strand, within AO353_03480at 745.227 kb on + strandat 745.234 kb on + strandat 745.234 kb on + strandat 745.234 kb on + strandat 745.235 kb on - strandat 745.235 kb on - strandat 745.235 kb on - strandat 745.235 kb on - strandat 745.235 kb on - strandat 745.241 kb on - strandat 745.241 kb on - strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.307 kb on + strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.308 kb on - strandat 745.366 kb on + strand, within AO353_03485at 745.366 kb on + strand, within AO353_03485at 745.367 kb on - strand, within AO353_03485at 745.367 kb on - strand, within AO353_03485at 745.367 kb on - strand, within AO353_03485at 745.367 kb on - strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.413 kb on + strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.414 kb on - strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.415 kb on + strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.416 kb on - strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.534 kb on + strand, within AO353_03485at 745.535 kb on - strand, within AO353_03485at 745.535 kb on - strand, within AO353_03485at 745.535 kb on - strand, within AO353_03485at 745.535 kb on - strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.576 kb on + strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.577 kb on - strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.579 kb on + strand, within AO353_03485at 745.580 kb on - strand, within AO353_03485at 745.580 kb on - strand, within AO353_03485at 745.580 kb on - strand, within AO353_03485at 745.580 kb on - strand, within AO353_03485at 745.601 kb on + strand, within AO353_03485at 745.601 kb on + strand, within AO353_03485at 745.601 kb on + strand, within AO353_03485at 745.601 kb on + strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.602 kb on - strand, within AO353_03485at 745.654 kb on + strandat 745.654 kb on + strandat 745.654 kb on + strandat 745.654 kb on + strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.655 kb on - strandat 745.657 kb on + strandat 745.657 kb on + strandat 745.658 kb on - strandat 745.658 kb on - strandat 745.709 kb on + strandat 745.709 kb on + strandat 745.710 kb on - strandat 745.710 kb on - strandat 745.710 kb on - strandat 745.710 kb on - strandat 745.717 kb on - strandat 745.717 kb on - strandat 745.717 kb on - strandat 745.717 kb on - strandat 745.755 kb on + strandat 745.755 kb on + strandat 745.766 kb on + strandat 745.766 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.799 kb on + strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.800 kb on - strandat 745.953 kb on + strandat 745.953 kb on + strandat 745.954 kb on - strandat 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490at 746.172 kb on + strand, within AO353_03490

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
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743,555 + AO353_03475 0.47 -0.9
743,556 - AO353_03475 0.47 -0.1
743,556 - AO353_03475 0.47 -0.9
743,556 - AO353_03475 0.47 +0.8
743,561 + AO353_03475 0.47 -0.1
743,561 + AO353_03475 0.47 -0.3
743,561 + AO353_03475 0.47 +1.3
743,561 + AO353_03475 0.47 +0.8
743,562 - AO353_03475 0.48 +0.5
743,562 - AO353_03475 0.48 -1.1
743,562 - AO353_03475 0.48 -0.8
743,562 - AO353_03475 0.48 -0.4
743,562 - AO353_03475 0.48 -1.1
743,562 - AO353_03475 0.48 -0.9
743,562 - AO353_03475 0.48 -0.2
743,579 + AO353_03475 0.49 -2.2
743,631 + AO353_03475 0.54 -0.7
743,631 + AO353_03475 0.54 -1.2
743,631 + AO353_03475 0.54 +3.1
743,631 + AO353_03475 0.54 -0.9
743,632 - AO353_03475 0.55 +0.0
743,632 - AO353_03475 0.55 +1.3
743,632 - AO353_03475 0.55 -0.5
743,632 - AO353_03475 0.55 -1.0
743,632 - AO353_03475 0.55 +0.7
743,632 - AO353_03475 0.55 +0.4
743,719 + AO353_03475 0.63 +0.5
743,841 - AO353_03475 0.75 +0.9
743,854 + AO353_03475 0.76 +2.7
743,986 - AO353_03475 0.90 +0.1
743,986 - AO353_03475 0.90 -0.9
743,997 + +0.8
743,997 + +1.1
743,997 + -1.1
743,998 - -1.0
743,998 - -0.9
744,089 + -0.2
744,089 + -0.8
744,089 + -0.7
744,089 + +1.1
744,089 + -1.0
744,089 + -1.0
744,089 + -1.4
744,089 + -0.1
744,089 + +0.8
744,090 - -1.4
744,090 - +0.5
744,090 - -0.9
744,090 - +0.5
744,090 - -0.2
744,090 - +0.8
744,090 - -0.8
744,180 + +0.7
744,180 + -0.4
744,214 + -1.4
744,280 + -0.2
744,312 + -0.7
744,312 + -0.2
744,313 - +0.6
744,393 + +1.3
744,502 + AO353_03480 0.20 +1.1
744,502 + AO353_03480 0.20 +0.5
744,503 - AO353_03480 0.20 +0.6
744,503 - AO353_03480 0.20 -0.1
744,503 - AO353_03480 0.20 -0.3
744,565 + +1.1
744,565 + AO353_03480 0.27 -0.1
744,566 - AO353_03480 0.27 +1.3
744,694 + AO353_03480 0.41 +2.1
744,694 + AO353_03480 0.41 -2.2
744,694 + AO353_03480 0.41 +0.5
744,695 - AO353_03480 0.41 +0.6
744,883 + AO353_03480 0.61 -0.5
744,883 + AO353_03480 0.61 -0.0
744,883 + AO353_03480 0.61 -0.3
744,883 + AO353_03480 0.61 -0.7
744,883 + AO353_03480 0.61 +1.8
744,883 + AO353_03480 0.61 +0.1
744,884 - AO353_03480 0.61 +0.1
744,884 - AO353_03480 0.61 -0.5
744,884 - AO353_03480 0.61 +0.0
744,884 - AO353_03480 0.61 +1.0
744,884 - AO353_03480 0.61 -0.5
744,884 - AO353_03480 0.61 +0.5
745,227 + -0.0
745,234 + -0.4
745,234 + -0.7
745,234 + +0.3
745,235 - -1.5
745,235 - +0.0
745,235 - +0.2
745,235 - +0.1
745,235 - +1.3
745,241 - +0.0
745,241 - +1.1
745,307 + -0.7
745,307 + -0.0
745,307 + -0.9
745,307 + -0.1
745,307 + +0.6
745,307 + -0.5
745,307 + +0.1
745,307 + -0.8
745,308 - -0.2
745,308 - -1.1
745,308 - -0.5
745,308 - -0.6
745,308 - -0.4
745,308 - +0.3
745,366 + AO353_03485 0.18 +1.1
745,366 + AO353_03485 0.18 +2.1
745,367 - AO353_03485 0.19 -0.3
745,367 - AO353_03485 0.19 -0.4
745,367 - AO353_03485 0.19 +0.3
745,367 - AO353_03485 0.19 -0.1
745,413 + AO353_03485 0.32 +0.4
745,413 + AO353_03485 0.32 -0.0
745,413 + AO353_03485 0.32 -0.1
745,413 + AO353_03485 0.32 +0.8
745,413 + AO353_03485 0.32 +0.8
745,413 + AO353_03485 0.32 +0.1
745,413 + AO353_03485 0.32 -0.4
745,413 + AO353_03485 0.32 -1.6
745,414 - AO353_03485 0.32 +0.1
745,414 - AO353_03485 0.32 +0.1
745,414 - AO353_03485 0.32 +0.1
745,414 - AO353_03485 0.32 -0.4
745,414 - AO353_03485 0.32 +0.7
745,414 - AO353_03485 0.32 +0.3
745,414 - AO353_03485 0.32 -1.2
745,414 - AO353_03485 0.32 -1.1
745,414 - AO353_03485 0.32 -1.2
745,415 + AO353_03485 0.32 -0.3
745,415 + AO353_03485 0.32 -0.0
745,415 + AO353_03485 0.32 -1.7
745,415 + AO353_03485 0.32 +0.8
745,415 + AO353_03485 0.32 -0.4
745,415 + AO353_03485 0.32 -0.7
745,415 + AO353_03485 0.32 -0.9
745,415 + AO353_03485 0.32 +3.1
745,415 + AO353_03485 0.32 -0.1
745,415 + AO353_03485 0.32 +0.5
745,415 + AO353_03485 0.32 +1.6
745,415 + AO353_03485 0.32 -0.0
745,415 + AO353_03485 0.32 -0.7
745,415 + AO353_03485 0.32 -0.2
745,415 + AO353_03485 0.32 -1.6
745,415 + AO353_03485 0.32 -0.6
745,415 + AO353_03485 0.32 +0.1
745,415 + AO353_03485 0.32 -1.1
745,415 + AO353_03485 0.32 -0.9
745,416 - AO353_03485 0.32 -0.7
745,416 - AO353_03485 0.32 -0.8
745,416 - AO353_03485 0.32 -1.2
745,416 - AO353_03485 0.32 +0.2
745,416 - AO353_03485 0.32 -1.3
745,416 - AO353_03485 0.32 -0.0
745,416 - AO353_03485 0.32 -0.5
745,416 - AO353_03485 0.32 -0.2
745,416 - AO353_03485 0.32 -0.0
745,416 - AO353_03485 0.32 -1.4
745,416 - AO353_03485 0.32 -0.5
745,416 - AO353_03485 0.32 +0.3
745,416 - AO353_03485 0.32 +0.6
745,416 - AO353_03485 0.32 +1.1
745,416 - AO353_03485 0.32 -1.2
745,416 - AO353_03485 0.32 -0.9
745,534 + AO353_03485 0.66 +0.1
745,534 + AO353_03485 0.66 -0.2
745,534 + AO353_03485 0.66 -0.6
745,534 + AO353_03485 0.66 +0.3
745,534 + AO353_03485 0.66 +0.6
745,535 - AO353_03485 0.66 -0.2
745,535 - AO353_03485 0.66 -0.1
745,535 - AO353_03485 0.66 +0.2
745,535 - AO353_03485 0.66 +0.3
745,576 + AO353_03485 0.77 +0.5
745,576 + AO353_03485 0.77 -2.1
745,576 + AO353_03485 0.77 +0.4
745,576 + AO353_03485 0.77 +0.1
745,576 + AO353_03485 0.77 -1.8
745,576 + AO353_03485 0.77 -0.7
745,577 - AO353_03485 0.78 -0.5
745,577 - AO353_03485 0.78 -0.3
745,577 - AO353_03485 0.78 -0.8
745,577 - AO353_03485 0.78 -1.7
745,577 - AO353_03485 0.78 +0.3
745,579 + AO353_03485 0.78 +1.1
745,579 + AO353_03485 0.78 +1.1
745,579 + AO353_03485 0.78 +1.1
745,579 + AO353_03485 0.78 -0.4
745,579 + AO353_03485 0.78 -0.1
745,579 + AO353_03485 0.78 -1.1
745,579 + AO353_03485 0.78 -2.5
745,580 - AO353_03485 0.78 -1.5
745,580 - AO353_03485 0.78 +0.5
745,580 - AO353_03485 0.78 +0.6
745,580 - AO353_03485 0.78 +1.1
745,601 + AO353_03485 0.84 -1.3
745,601 + AO353_03485 0.84 +0.9
745,601 + AO353_03485 0.84 +1.5
745,601 + AO353_03485 0.84 -0.4
745,602 - AO353_03485 0.85 -0.1
745,602 - AO353_03485 0.85 +0.3
745,602 - AO353_03485 0.85 -0.5
745,602 - AO353_03485 0.85 +0.5
745,602 - AO353_03485 0.85 +0.3
745,654 + +0.1
745,654 + +1.1
745,654 + -1.6
745,654 + +0.2
745,655 - -0.1
745,655 - -1.4
745,655 - +0.1
745,655 - -0.9
745,655 - -0.8
745,655 - +0.3
745,655 - -0.0
745,655 - +0.5
745,655 - +0.5
745,657 + +0.3
745,657 + -0.9
745,658 - +0.1
745,658 - -0.6
745,709 + -0.4
745,709 + +0.1
745,710 - -0.2
745,710 - +2.8
745,710 - -1.6
745,710 - -2.0
745,717 - -0.9
745,717 - +1.5
745,717 - -0.3
745,717 - -0.1
745,755 + +0.7
745,755 + -0.8
745,766 + +0.1
745,766 + +0.9
745,799 + -0.1
745,799 + -1.4
745,799 + +0.1
745,799 + +0.8
745,799 + -0.0
745,799 + +0.3
745,799 + -1.2
745,800 - -2.1
745,800 - -1.1
745,800 - +0.8
745,800 - +0.8
745,800 - -0.9
745,800 - -0.6
745,800 - -1.3
745,800 - -0.2
745,953 + +0.1
745,953 + +0.3
745,954 - -1.0
746,172 + AO353_03490 0.22 -2.6
746,172 + AO353_03490 0.22 -0.6
746,172 + AO353_03490 0.22 -0.5
746,172 + AO353_03490 0.22 -0.7
746,172 + AO353_03490 0.22 +0.8
746,172 + AO353_03490 0.22 -1.1

Or see this region's nucleotide sequence