Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03270 and AO353_03275 are separated by 444 nucleotides AO353_03275 and AO353_03280 are separated by 99 nucleotides AO353_03280 and AO353_03285 are separated by 287 nucleotides
AO353_03270: AO353_03270 - pili assembly chaperone, at 697,272 to 698,591
_03270
AO353_03275: AO353_03275 - LysR family transcriptional regulator, at 699,036 to 699,914
_03275
AO353_03280: AO353_03280 - glutathione S-transferase, at 700,014 to 700,622
_03280
AO353_03285: AO353_03285 - GCN5 family acetyltransferase, at 700,910 to 701,326
_03285
Position (kb) 699
700 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 698.037 kb on + strand, within AO353_03270 at 698.037 kb on + strand, within AO353_03270 at 698.037 kb on + strand, within AO353_03270 at 698.037 kb on + strand, within AO353_03270 at 698.037 kb on + strand, within AO353_03270 at 698.037 kb on + strand, within AO353_03270 at 698.038 kb on - strand, within AO353_03270 at 698.038 kb on - strand, within AO353_03270 at 698.038 kb on - strand, within AO353_03270 at 698.038 kb on - strand, within AO353_03270 at 698.038 kb on - strand, within AO353_03270 at 698.038 kb on - strand, within AO353_03270 at 698.038 kb on - strand, within AO353_03270 at 698.046 kb on - strand, within AO353_03270 at 698.053 kb on + strand, within AO353_03270 at 698.053 kb on + strand, within AO353_03270 at 698.053 kb on + strand, within AO353_03270 at 698.054 kb on - strand, within AO353_03270 at 698.054 kb on - strand, within AO353_03270 at 698.054 kb on - strand, within AO353_03270 at 698.054 kb on - strand, within AO353_03270 at 698.054 kb on - strand, within AO353_03270 at 698.148 kb on + strand, within AO353_03270 at 698.148 kb on + strand, within AO353_03270 at 698.149 kb on - strand, within AO353_03270 at 698.149 kb on - strand, within AO353_03270 at 698.149 kb on - strand, within AO353_03270 at 698.149 kb on - strand, within AO353_03270 at 698.172 kb on - strand, within AO353_03270 at 698.217 kb on + strand, within AO353_03270 at 698.218 kb on - strand, within AO353_03270 at 698.218 kb on - strand, within AO353_03270 at 698.218 kb on - strand, within AO353_03270 at 698.218 kb on - strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.246 kb on + strand, within AO353_03270 at 698.247 kb on - strand, within AO353_03270 at 698.247 kb on - strand, within AO353_03270 at 698.247 kb on - strand, within AO353_03270 at 698.247 kb on - strand, within AO353_03270 at 698.247 kb on - strand, within AO353_03270 at 698.247 kb on - strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.248 kb on + strand, within AO353_03270 at 698.249 kb on - strand, within AO353_03270 at 698.249 kb on - strand, within AO353_03270 at 698.249 kb on - strand, within AO353_03270 at 698.249 kb on - strand, within AO353_03270 at 698.249 kb on - strand, within AO353_03270 at 698.249 kb on - strand, within AO353_03270 at 698.348 kb on - strand, within AO353_03270 at 698.366 kb on - strand, within AO353_03270 at 698.419 kb on + strand, within AO353_03270 at 698.419 kb on + strand, within AO353_03270 at 698.432 kb on + strand, within AO353_03270 at 698.543 kb on + strand at 698.544 kb on - strand at 698.553 kb on + strand at 698.598 kb on - strand at 698.636 kb on + strand at 698.636 kb on + strand at 698.653 kb on + strand at 698.654 kb on - strand at 698.654 kb on - strand at 698.654 kb on - strand at 698.700 kb on + strand at 698.701 kb on - strand at 698.754 kb on + strand at 698.754 kb on + strand at 698.755 kb on - strand at 698.755 kb on - strand at 698.755 kb on - strand at 698.810 kb on + strand at 698.810 kb on + strand at 698.810 kb on + strand at 698.810 kb on + strand at 698.810 kb on + strand at 698.810 kb on + strand at 698.810 kb on + strand at 698.810 kb on + strand at 698.810 kb on + strand at 698.810 kb on + strand at 698.811 kb on - strand at 698.811 kb on - strand at 698.811 kb on - strand at 698.820 kb on + strand at 698.821 kb on - strand at 698.821 kb on - strand at 698.821 kb on - strand at 698.850 kb on + strand at 698.850 kb on + strand at 698.850 kb on + strand at 698.850 kb on + strand at 698.850 kb on + strand at 698.851 kb on - strand at 698.851 kb on - strand at 698.851 kb on - strand at 698.851 kb on - strand at 698.851 kb on - strand at 698.851 kb on - strand at 698.947 kb on + strand at 698.947 kb on + strand at 698.948 kb on - strand at 698.948 kb on - strand at 698.965 kb on + strand at 698.965 kb on + strand at 698.965 kb on + strand at 698.966 kb on - strand at 698.966 kb on - strand at 698.966 kb on - strand at 698.969 kb on + strand at 698.969 kb on + strand at 698.969 kb on + strand at 698.969 kb on + strand at 698.969 kb on + strand at 698.969 kb on + strand at 698.969 kb on + strand at 698.970 kb on - strand at 698.970 kb on - strand at 698.970 kb on - strand at 698.970 kb on - strand at 698.970 kb on - strand at 698.981 kb on + strand at 698.981 kb on + strand at 698.981 kb on + strand at 698.981 kb on + strand at 698.982 kb on - strand at 698.982 kb on - strand at 698.982 kb on - strand at 698.982 kb on - strand at 699.428 kb on + strand, within AO353_03275 at 699.428 kb on + strand, within AO353_03275 at 699.428 kb on + strand, within AO353_03275 at 699.555 kb on - strand, within AO353_03275 at 699.562 kb on + strand, within AO353_03275 at 699.857 kb on + strand at 699.857 kb on + strand at 699.857 kb on + strand at 699.858 kb on - strand at 699.920 kb on + strand at 699.920 kb on + strand at 699.920 kb on + strand at 699.921 kb on - strand at 699.921 kb on - strand at 699.921 kb on - strand at 699.921 kb on - strand at 699.921 kb on - strand at 699.921 kb on - strand at 699.921 kb on - strand at 699.921 kb on - strand at 699.924 kb on + strand at 699.924 kb on + strand at 699.925 kb on - strand at 699.925 kb on - strand at 699.951 kb on + strand at 699.952 kb on - strand at 699.976 kb on + strand at 699.976 kb on + strand at 699.976 kb on + strand at 699.977 kb on - strand at 699.977 kb on - strand at 699.977 kb on - strand at 699.977 kb on - strand at 700.023 kb on + strand at 700.023 kb on + strand at 700.023 kb on + strand at 700.023 kb on + strand at 700.024 kb on - strand at 700.164 kb on + strand, within AO353_03280 at 700.164 kb on + strand, within AO353_03280 at 700.164 kb on + strand, within AO353_03280 at 700.164 kb on + strand, within AO353_03280 at 700.164 kb on + strand, within AO353_03280 at 700.164 kb on + strand, within AO353_03280 at 700.164 kb on + strand at 700.165 kb on - strand, within AO353_03280 at 700.165 kb on - strand, within AO353_03280 at 700.165 kb on - strand, within AO353_03280 at 700.165 kb on - strand, within AO353_03280 at 700.165 kb on - strand, within AO353_03280 at 700.165 kb on - strand, within AO353_03280 at 700.165 kb on - strand, within AO353_03280 at 700.165 kb on - strand, within AO353_03280 at 700.227 kb on + strand, within AO353_03280 at 700.227 kb on + strand, within AO353_03280 at 700.227 kb on + strand, within AO353_03280 at 700.227 kb on + strand, within AO353_03280 at 700.228 kb on - strand, within AO353_03280 at 700.446 kb on + strand, within AO353_03280 at 700.446 kb on + strand, within AO353_03280 at 700.446 kb on + strand, within AO353_03280 at 700.446 kb on + strand, within AO353_03280 at 700.446 kb on + strand, within AO353_03280 at 700.447 kb on - strand, within AO353_03280 at 700.447 kb on - strand, within AO353_03280 at 700.447 kb on - strand, within AO353_03280 at 700.447 kb on - strand, within AO353_03280 at 700.447 kb on - strand, within AO353_03280 at 700.482 kb on + strand, within AO353_03280 at 700.482 kb on + strand, within AO353_03280 at 700.482 kb on + strand, within AO353_03280 at 700.482 kb on + strand, within AO353_03280 at 700.482 kb on + strand, within AO353_03280 at 700.482 kb on + strand, within AO353_03280 at 700.495 kb on + strand, within AO353_03280 at 700.495 kb on + strand, within AO353_03280 at 700.496 kb on - strand, within AO353_03280 at 700.646 kb on + strand at 700.646 kb on + strand at 700.646 kb on + strand at 700.647 kb on - strand at 700.647 kb on - strand at 700.647 kb on - strand at 700.647 kb on - strand at 700.647 kb on - strand at 700.831 kb on + strand at 700.831 kb on + strand at 700.831 kb on + strand at 700.831 kb on + strand at 700.832 kb on - strand at 700.843 kb on + strand at 700.843 kb on + strand at 700.843 kb on + strand at 700.843 kb on + strand at 700.844 kb on - strand at 700.844 kb on - strand at 700.844 kb on - strand at 700.844 kb on - strand at 700.844 kb on - strand at 700.844 kb on - strand at 700.844 kb on - strand at 700.844 kb on - strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.845 kb on + strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.846 kb on - strand at 700.851 kb on + strand at 700.851 kb on + strand at 700.852 kb on - strand at 700.852 kb on - strand at 700.873 kb on + strand at 700.873 kb on + strand at 700.873 kb on + strand at 700.873 kb on + strand at 700.873 kb on + strand at 700.874 kb on - strand at 700.874 kb on - strand at 700.874 kb on - strand at 700.874 kb on - strand at 700.874 kb on - strand at 700.874 kb on - strand at 700.874 kb on - strand at 700.874 kb on - strand at 700.876 kb on - strand at 700.876 kb on - strand at 700.876 kb on - strand at 700.876 kb on - strand at 700.876 kb on - strand at 700.878 kb on + strand at 700.878 kb on + strand at 700.878 kb on + strand at 700.879 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 698,037 + AO353_03270 0.58 +0.4 698,037 + AO353_03270 0.58 -0.9 698,037 + AO353_03270 0.58 -0.9 698,037 + AO353_03270 0.58 +0.7 698,037 + AO353_03270 0.58 +0.7 698,037 + AO353_03270 0.58 -1.1 698,038 - AO353_03270 0.58 -1.6 698,038 - AO353_03270 0.58 -0.2 698,038 - AO353_03270 0.58 -0.5 698,038 - AO353_03270 0.58 -0.9 698,038 - AO353_03270 0.58 +0.1 698,038 - AO353_03270 0.58 -0.7 698,038 - AO353_03270 0.58 -1.7 698,046 - AO353_03270 0.59 -0.1 698,053 + AO353_03270 0.59 -0.4 698,053 + AO353_03270 0.59 +1.3 698,053 + AO353_03270 0.59 +0.7 698,054 - AO353_03270 0.59 -0.5 698,054 - AO353_03270 0.59 +2.1 698,054 - AO353_03270 0.59 -0.2 698,054 - AO353_03270 0.59 +0.8 698,054 - AO353_03270 0.59 -0.9 698,148 + AO353_03270 0.66 -0.3 698,148 + AO353_03270 0.66 -1.9 698,149 - AO353_03270 0.66 +1.1 698,149 - AO353_03270 0.66 +0.8 698,149 - AO353_03270 0.66 +0.8 698,149 - AO353_03270 0.66 +1.8 698,172 - AO353_03270 0.68 -1.1 698,217 + AO353_03270 0.72 +1.1 698,218 - AO353_03270 0.72 +0.1 698,218 - AO353_03270 0.72 +0.0 698,218 - AO353_03270 0.72 +0.5 698,218 - AO353_03270 0.72 +0.5 698,246 + AO353_03270 0.74 -1.0 698,246 + AO353_03270 0.74 +0.3 698,246 + AO353_03270 0.74 +0.8 698,246 + AO353_03270 0.74 +0.1 698,246 + AO353_03270 0.74 -0.3 698,246 + AO353_03270 0.74 -1.4 698,246 + AO353_03270 0.74 +0.1 698,246 + AO353_03270 0.74 -0.6 698,246 + AO353_03270 0.74 +0.7 698,246 + AO353_03270 0.74 +1.0 698,247 - AO353_03270 0.74 -0.7 698,247 - AO353_03270 0.74 +1.5 698,247 - AO353_03270 0.74 +0.3 698,247 - AO353_03270 0.74 -0.4 698,247 - AO353_03270 0.74 +0.1 698,247 - AO353_03270 0.74 +0.2 698,248 + AO353_03270 0.74 -1.6 698,248 + AO353_03270 0.74 +0.1 698,248 + AO353_03270 0.74 -0.6 698,248 + AO353_03270 0.74 +1.3 698,248 + AO353_03270 0.74 +0.5 698,248 + AO353_03270 0.74 +0.3 698,248 + AO353_03270 0.74 -1.1 698,248 + AO353_03270 0.74 +1.1 698,248 + AO353_03270 0.74 +0.5 698,248 + AO353_03270 0.74 -0.4 698,248 + AO353_03270 0.74 -0.9 698,249 - AO353_03270 0.74 -0.7 698,249 - AO353_03270 0.74 -0.3 698,249 - AO353_03270 0.74 -0.4 698,249 - AO353_03270 0.74 +0.7 698,249 - AO353_03270 0.74 +1.2 698,249 - AO353_03270 0.74 -0.1 698,348 - AO353_03270 0.82 +2.1 698,366 - AO353_03270 0.83 -0.1 698,419 + AO353_03270 0.87 +0.1 698,419 + AO353_03270 0.87 -0.4 698,432 + AO353_03270 0.88 +0.9 698,543 + +0.3 698,544 - +0.1 698,553 + +1.1 698,598 - +0.0 698,636 + +0.3 698,636 + -1.1 698,653 + +1.1 698,654 - -0.8 698,654 - -0.5 698,654 - -0.1 698,700 + +0.3 698,701 - -2.0 698,754 + +2.1 698,754 + +1.3 698,755 - -0.1 698,755 - -1.1 698,755 - +0.1 698,810 + +1.1 698,810 + -2.3 698,810 + -1.3 698,810 + +1.0 698,810 + -0.7 698,810 + -0.3 698,810 + -0.2 698,810 + +0.1 698,810 + -0.7 698,810 + -0.3 698,811 - -0.3 698,811 - +0.4 698,811 - -1.3 698,820 + -0.2 698,821 - +0.7 698,821 - +0.7 698,821 - -1.0 698,850 + +0.6 698,850 + -0.2 698,850 + -0.7 698,850 + -1.6 698,850 + -0.1 698,851 - -0.0 698,851 - +1.5 698,851 - -0.3 698,851 - +0.2 698,851 - -1.0 698,851 - +0.7 698,947 + +0.3 698,947 + -1.6 698,948 - -1.4 698,948 - +0.5 698,965 + -1.3 698,965 + -0.4 698,965 + +0.6 698,966 - +0.3 698,966 - +0.6 698,966 - -0.7 698,969 + -2.2 698,969 + -0.7 698,969 + +0.9 698,969 + -1.6 698,969 + -0.2 698,969 + -0.7 698,969 + -1.0 698,970 - +1.1 698,970 - -0.4 698,970 - +3.1 698,970 - +0.3 698,970 - -0.3 698,981 + -0.4 698,981 + -0.4 698,981 + -0.5 698,981 + +1.1 698,982 - -0.6 698,982 - -0.3 698,982 - -3.1 698,982 - +1.0 699,428 + AO353_03275 0.45 -0.4 699,428 + AO353_03275 0.45 -0.5 699,428 + AO353_03275 0.45 -1.4 699,555 - AO353_03275 0.59 -1.1 699,562 + AO353_03275 0.60 -0.9 699,857 + +0.2 699,857 + +0.2 699,857 + -0.6 699,858 - -1.6 699,920 + -0.0 699,920 + +0.2 699,920 + -0.7 699,921 - -0.3 699,921 - +1.7 699,921 - -0.1 699,921 - +0.4 699,921 - -0.5 699,921 - -0.5 699,921 - +0.4 699,921 - +0.7 699,924 + -0.3 699,924 + -1.1 699,925 - -1.3 699,925 - -2.3 699,951 + -0.5 699,952 - +0.3 699,976 + -0.3 699,976 + +1.7 699,976 + -1.1 699,977 - -0.5 699,977 - -0.5 699,977 - -1.2 699,977 - +0.3 700,023 + -0.5 700,023 + +0.1 700,023 + +2.3 700,023 + +0.8 700,024 - -0.3 700,164 + AO353_03280 0.25 -0.5 700,164 + AO353_03280 0.25 -0.3 700,164 + AO353_03280 0.25 -0.3 700,164 + AO353_03280 0.25 -1.4 700,164 + AO353_03280 0.25 +1.7 700,164 + AO353_03280 0.25 +1.1 700,164 + +2.1 700,165 - AO353_03280 0.25 +0.1 700,165 - AO353_03280 0.25 -0.0 700,165 - AO353_03280 0.25 +0.5 700,165 - AO353_03280 0.25 -1.7 700,165 - AO353_03280 0.25 -0.5 700,165 - AO353_03280 0.25 -0.5 700,165 - AO353_03280 0.25 -2.6 700,165 - AO353_03280 0.25 +0.2 700,227 + AO353_03280 0.35 +0.1 700,227 + AO353_03280 0.35 +0.7 700,227 + AO353_03280 0.35 -0.5 700,227 + AO353_03280 0.35 +0.5 700,228 - AO353_03280 0.35 +0.8 700,446 + AO353_03280 0.71 -0.9 700,446 + AO353_03280 0.71 -1.4 700,446 + AO353_03280 0.71 +0.3 700,446 + AO353_03280 0.71 -0.7 700,446 + AO353_03280 0.71 -0.1 700,447 - AO353_03280 0.71 -0.8 700,447 - AO353_03280 0.71 +0.5 700,447 - AO353_03280 0.71 +0.1 700,447 - AO353_03280 0.71 +0.1 700,447 - AO353_03280 0.71 +0.0 700,482 + AO353_03280 0.77 -0.1 700,482 + AO353_03280 0.77 -0.0 700,482 + AO353_03280 0.77 -0.9 700,482 + AO353_03280 0.77 +0.2 700,482 + AO353_03280 0.77 +0.1 700,482 + AO353_03280 0.77 -0.3 700,495 + AO353_03280 0.79 +1.3 700,495 + AO353_03280 0.79 -1.4 700,496 - AO353_03280 0.79 -1.3 700,646 + -0.5 700,646 + -0.3 700,646 + -0.3 700,647 - -1.2 700,647 - -1.4 700,647 - -0.5 700,647 - -0.5 700,647 - +0.7 700,831 + -1.4 700,831 + -0.6 700,831 + -0.3 700,831 + +1.5 700,832 - -1.6 700,843 + +0.3 700,843 + +0.5 700,843 + +0.8 700,843 + +0.1 700,844 - +0.4 700,844 - +1.5 700,844 - -0.8 700,844 - -1.5 700,844 - -0.3 700,844 - -0.9 700,844 - -0.6 700,844 - +0.5 700,845 + +1.3 700,845 + +0.1 700,845 + -1.9 700,845 + +0.7 700,845 + +0.1 700,845 + +0.4 700,845 + -0.1 700,845 + -0.2 700,845 + -1.5 700,845 + +0.5 700,845 + -0.7 700,845 + +0.8 700,845 + +0.5 700,845 + -0.4 700,845 + +0.2 700,845 + -0.0 700,845 + +0.1 700,845 + -1.0 700,846 - -0.6 700,846 - +0.2 700,846 - -0.3 700,846 - +2.1 700,846 - -0.0 700,846 - -0.3 700,846 - +0.5 700,846 - +0.6 700,846 - +0.2 700,846 - -0.3 700,846 - -0.8 700,846 - +2.1 700,851 + -0.7 700,851 + +0.5 700,852 - -0.0 700,852 - +0.3 700,873 + +0.5 700,873 + -0.4 700,873 + -1.6 700,873 + +0.2 700,873 + +0.6 700,874 - +1.1 700,874 - -1.3 700,874 - -0.9 700,874 - -0.0 700,874 - -0.3 700,874 - -0.3 700,874 - +0.2 700,874 - -1.1 700,876 - -0.1 700,876 - -0.6 700,876 - -0.5 700,876 - -0.5 700,876 - +0.7 700,878 + -0.7 700,878 + -0.2 700,878 + -0.4 700,879 - -0.4
Or see this region's nucleotide sequence