Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02265 and AO353_02270 are separated by 238 nucleotides AO353_02270 and AO353_02275 are separated by 132 nucleotides AO353_02275 and AO353_02280 are separated by 75 nucleotides
AO353_02265: AO353_02265 - protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific, at 484,246 to 485,154
_02265
AO353_02270: AO353_02270 - isochorismatase, at 485,393 to 485,983
_02270
AO353_02275: AO353_02275 - hypothetical protein, at 486,116 to 486,436
_02275
AO353_02280: AO353_02280 - DNA mismatch repair protein MutS, at 486,512 to 487,069
_02280
Position (kb) 485
486 Strain fitness (log2 ratio) -2
-1
0
1
2 at 484.509 kb on - strand, within AO353_02265 at 484.547 kb on + strand, within AO353_02265 at 484.548 kb on - strand, within AO353_02265 at 484.548 kb on - strand, within AO353_02265 at 484.548 kb on - strand, within AO353_02265 at 484.548 kb on - strand, within AO353_02265 at 484.619 kb on + strand, within AO353_02265 at 484.619 kb on + strand, within AO353_02265 at 484.721 kb on + strand, within AO353_02265 at 484.846 kb on + strand, within AO353_02265 at 484.846 kb on + strand, within AO353_02265 at 484.846 kb on + strand, within AO353_02265 at 484.847 kb on - strand, within AO353_02265 at 484.847 kb on - strand, within AO353_02265 at 484.847 kb on - strand, within AO353_02265 at 484.901 kb on + strand, within AO353_02265 at 484.901 kb on + strand, within AO353_02265 at 484.901 kb on + strand, within AO353_02265 at 484.901 kb on + strand, within AO353_02265 at 484.902 kb on - strand, within AO353_02265 at 484.902 kb on - strand, within AO353_02265 at 484.988 kb on + strand, within AO353_02265 at 484.988 kb on + strand, within AO353_02265 at 484.988 kb on + strand, within AO353_02265 at 484.988 kb on + strand, within AO353_02265 at 484.988 kb on + strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 484.989 kb on - strand, within AO353_02265 at 485.189 kb on + strand at 485.189 kb on + strand at 485.189 kb on + strand at 485.189 kb on + strand at 485.190 kb on - strand at 485.190 kb on - strand at 485.190 kb on - strand at 485.198 kb on - strand at 485.238 kb on + strand at 485.238 kb on + strand at 485.238 kb on + strand at 485.238 kb on + strand at 485.238 kb on + strand at 485.238 kb on + strand at 485.239 kb on - strand at 485.239 kb on - strand at 485.239 kb on - strand at 485.318 kb on + strand at 485.319 kb on - strand at 485.492 kb on + strand, within AO353_02270 at 485.492 kb on + strand, within AO353_02270 at 485.492 kb on + strand, within AO353_02270 at 485.542 kb on + strand, within AO353_02270 at 485.595 kb on + strand, within AO353_02270 at 485.595 kb on + strand, within AO353_02270 at 485.595 kb on + strand at 485.596 kb on - strand, within AO353_02270 at 485.596 kb on - strand, within AO353_02270 at 485.596 kb on - strand, within AO353_02270 at 485.596 kb on - strand, within AO353_02270 at 485.596 kb on - strand, within AO353_02270 at 485.596 kb on - strand, within AO353_02270 at 485.596 kb on - strand, within AO353_02270 at 485.596 kb on - strand, within AO353_02270 at 485.596 kb on - strand, within AO353_02270 at 485.803 kb on + strand, within AO353_02270 at 485.804 kb on - strand, within AO353_02270 at 485.804 kb on - strand, within AO353_02270 at 486.052 kb on + strand at 486.341 kb on + strand, within AO353_02275 at 486.341 kb on + strand, within AO353_02275 at 486.341 kb on + strand, within AO353_02275 at 486.341 kb on + strand, within AO353_02275 at 486.341 kb on + strand, within AO353_02275 at 486.341 kb on + strand, within AO353_02275 at 486.342 kb on - strand, within AO353_02275 at 486.342 kb on - strand, within AO353_02275 at 486.342 kb on - strand, within AO353_02275 at 486.342 kb on - strand, within AO353_02275 at 486.342 kb on - strand, within AO353_02275 at 486.342 kb on - strand, within AO353_02275 at 486.906 kb on + strand, within AO353_02280 at 486.906 kb on + strand, within AO353_02280 at 486.906 kb on + strand, within AO353_02280 at 486.906 kb on + strand, within AO353_02280
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 484,509 - AO353_02265 0.29 -0.3 484,547 + AO353_02265 0.33 -1.4 484,548 - AO353_02265 0.33 -0.6 484,548 - AO353_02265 0.33 +2.0 484,548 - AO353_02265 0.33 +1.0 484,548 - AO353_02265 0.33 +0.6 484,619 + AO353_02265 0.41 +0.1 484,619 + AO353_02265 0.41 -0.0 484,721 + AO353_02265 0.52 -1.0 484,846 + AO353_02265 0.66 -1.2 484,846 + AO353_02265 0.66 -1.0 484,846 + AO353_02265 0.66 -0.2 484,847 - AO353_02265 0.66 -1.2 484,847 - AO353_02265 0.66 +1.0 484,847 - AO353_02265 0.66 -0.8 484,901 + AO353_02265 0.72 -0.2 484,901 + AO353_02265 0.72 +0.2 484,901 + AO353_02265 0.72 -1.0 484,901 + AO353_02265 0.72 -2.1 484,902 - AO353_02265 0.72 +1.0 484,902 - AO353_02265 0.72 -0.6 484,988 + AO353_02265 0.82 -0.5 484,988 + AO353_02265 0.82 +0.8 484,988 + AO353_02265 0.82 -0.6 484,988 + AO353_02265 0.82 +0.2 484,988 + AO353_02265 0.82 -0.5 484,989 - AO353_02265 0.82 -0.2 484,989 - AO353_02265 0.82 +0.6 484,989 - AO353_02265 0.82 -1.0 484,989 - AO353_02265 0.82 -0.6 484,989 - AO353_02265 0.82 -0.7 484,989 - AO353_02265 0.82 -0.0 484,989 - AO353_02265 0.82 +0.5 484,989 - AO353_02265 0.82 -1.6 484,989 - AO353_02265 0.82 +0.4 484,989 - AO353_02265 0.82 +1.4 484,989 - AO353_02265 0.82 +1.0 484,989 - AO353_02265 0.82 -1.0 484,989 - AO353_02265 0.82 +1.0 485,189 + +0.5 485,189 + -0.6 485,189 + +0.8 485,189 + -0.2 485,190 - -0.0 485,190 - +0.4 485,190 - -1.9 485,198 - -0.8 485,238 + -1.0 485,238 + -0.8 485,238 + +0.5 485,238 + +0.4 485,238 + -1.0 485,238 + +0.0 485,239 - +0.7 485,239 - +1.6 485,239 - -1.3 485,318 + +0.1 485,319 - -1.9 485,492 + AO353_02270 0.17 -0.4 485,492 + AO353_02270 0.17 -0.5 485,492 + AO353_02270 0.17 -0.0 485,542 + AO353_02270 0.25 -2.0 485,595 + AO353_02270 0.34 -0.0 485,595 + AO353_02270 0.34 +1.0 485,595 + +1.0 485,596 - AO353_02270 0.34 -1.6 485,596 - AO353_02270 0.34 -0.4 485,596 - AO353_02270 0.34 +0.7 485,596 - AO353_02270 0.34 -0.6 485,596 - AO353_02270 0.34 -1.2 485,596 - AO353_02270 0.34 -0.7 485,596 - AO353_02270 0.34 -0.6 485,596 - AO353_02270 0.34 -0.0 485,596 - AO353_02270 0.34 -1.2 485,803 + AO353_02270 0.69 -1.8 485,804 - AO353_02270 0.70 +0.2 485,804 - AO353_02270 0.70 -1.2 486,052 + +1.2 486,341 + AO353_02275 0.70 -1.2 486,341 + AO353_02275 0.70 +1.0 486,341 + AO353_02275 0.70 -1.0 486,341 + AO353_02275 0.70 +1.4 486,341 + AO353_02275 0.70 -0.0 486,341 + AO353_02275 0.70 -1.6 486,342 - AO353_02275 0.70 -0.8 486,342 - AO353_02275 0.70 -0.7 486,342 - AO353_02275 0.70 -0.2 486,342 - AO353_02275 0.70 -1.5 486,342 - AO353_02275 0.70 -0.0 486,342 - AO353_02275 0.70 -1.2 486,906 + AO353_02280 0.71 -0.2 486,906 + AO353_02280 0.71 -0.8 486,906 + AO353_02280 0.71 +0.4 486,906 + AO353_02280 0.71 +1.6
Or see this region's nucleotide sequence