Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_01715

Experiment: L-Aspartic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_01710 and AO353_01715 are separated by 301 nucleotidesAO353_01715 and AO353_01720 are separated by 30 nucleotides AO353_01710: AO353_01710 - alpha/beta hydrolase, at 358,808 to 359,614 _01710 AO353_01715: AO353_01715 - esterase, at 359,916 to 360,359 _01715 AO353_01720: AO353_01720 - AMP-binding protein, at 360,390 to 362,057 _01720 Position (kb) 359 360 361Strain fitness (log2 ratio) -2 -1 0 1 2at 358.939 kb on + strand, within AO353_01710at 359.010 kb on - strand, within AO353_01710at 359.010 kb on - strand, within AO353_01710at 359.058 kb on + strand, within AO353_01710at 359.058 kb on + strand, within AO353_01710at 359.058 kb on + strand, within AO353_01710at 359.058 kb on + strand, within AO353_01710at 359.058 kb on + strand, within AO353_01710at 359.059 kb on - strand, within AO353_01710at 359.059 kb on - strand, within AO353_01710at 359.059 kb on - strand, within AO353_01710at 359.059 kb on - strand, within AO353_01710at 359.059 kb on - strand, within AO353_01710at 359.133 kb on + strand, within AO353_01710at 359.133 kb on + strand, within AO353_01710at 359.133 kb on + strand, within AO353_01710at 359.133 kb on + strand, within AO353_01710at 359.133 kb on + strand, within AO353_01710at 359.133 kb on + strand, within AO353_01710at 359.133 kb on + strand, within AO353_01710at 359.134 kb on - strand, within AO353_01710at 359.134 kb on - strand, within AO353_01710at 359.134 kb on - strand, within AO353_01710at 359.187 kb on + strand, within AO353_01710at 359.187 kb on + strand, within AO353_01710at 359.187 kb on + strand, within AO353_01710at 359.187 kb on + strand, within AO353_01710at 359.188 kb on - strand, within AO353_01710at 359.188 kb on - strand, within AO353_01710at 359.347 kb on - strand, within AO353_01710at 359.530 kb on - strand, within AO353_01710at 359.530 kb on - strand, within AO353_01710at 359.562 kb on + strandat 359.563 kb on - strandat 359.563 kb on - strandat 359.614 kb on + strandat 359.615 kb on - strandat 359.655 kb on + strandat 359.656 kb on - strandat 359.682 kb on + strandat 359.683 kb on - strandat 359.683 kb on - strandat 359.683 kb on - strandat 359.717 kb on - strandat 359.879 kb on + strandat 359.879 kb on + strandat 359.902 kb on + strandat 359.902 kb on + strandat 359.903 kb on - strandat 359.903 kb on - strandat 359.949 kb on + strandat 359.949 kb on + strandat 360.009 kb on - strand, within AO353_01715at 360.118 kb on + strand, within AO353_01715at 360.119 kb on - strand, within AO353_01715at 360.119 kb on - strand, within AO353_01715at 360.178 kb on - strand, within AO353_01715at 360.178 kb on - strand, within AO353_01715at 360.208 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.279 kb on + strand, within AO353_01715at 360.280 kb on - strand, within AO353_01715at 360.280 kb on - strand, within AO353_01715at 360.280 kb on - strand, within AO353_01715at 360.280 kb on - strand, within AO353_01715at 360.280 kb on - strand, within AO353_01715at 360.280 kb on - strand, within AO353_01715at 360.280 kb on - strand, within AO353_01715at 360.280 kb on - strand, within AO353_01715at 360.281 kb on + strand, within AO353_01715at 360.382 kb on - strandat 360.382 kb on - strandat 360.449 kb on - strandat 360.714 kb on - strand, within AO353_01720at 360.724 kb on - strand, within AO353_01720at 360.760 kb on + strand, within AO353_01720at 360.760 kb on + strand, within AO353_01720at 360.760 kb on + strand, within AO353_01720at 360.761 kb on - strand, within AO353_01720at 360.761 kb on - strand, within AO353_01720at 360.761 kb on - strand, within AO353_01720at 361.022 kb on + strand, within AO353_01720at 361.022 kb on + strand, within AO353_01720at 361.023 kb on - strand, within AO353_01720at 361.023 kb on - strand, within AO353_01720at 361.023 kb on - strand, within AO353_01720at 361.023 kb on - strand, within AO353_01720at 361.054 kb on + strand, within AO353_01720at 361.055 kb on - strand, within AO353_01720at 361.134 kb on + strand, within AO353_01720at 361.134 kb on + strand, within AO353_01720at 361.243 kb on + strand, within AO353_01720at 361.243 kb on + strand, within AO353_01720at 361.244 kb on - strand, within AO353_01720at 361.244 kb on - strand, within AO353_01720at 361.244 kb on - strand, within AO353_01720

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Aspartic Acid (C)
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358,939 + AO353_01710 0.16 -0.1
359,010 - AO353_01710 0.25 +0.3
359,010 - AO353_01710 0.25 +0.9
359,058 + AO353_01710 0.31 -0.4
359,058 + AO353_01710 0.31 -1.8
359,058 + AO353_01710 0.31 +0.7
359,058 + AO353_01710 0.31 -0.1
359,058 + AO353_01710 0.31 +0.5
359,059 - AO353_01710 0.31 +0.2
359,059 - AO353_01710 0.31 +0.0
359,059 - AO353_01710 0.31 -0.1
359,059 - AO353_01710 0.31 -1.8
359,059 - AO353_01710 0.31 +0.6
359,133 + AO353_01710 0.40 -0.7
359,133 + AO353_01710 0.40 -1.2
359,133 + AO353_01710 0.40 +0.6
359,133 + AO353_01710 0.40 -0.2
359,133 + AO353_01710 0.40 -1.9
359,133 + AO353_01710 0.40 +0.3
359,133 + AO353_01710 0.40 -0.7
359,134 - AO353_01710 0.40 +0.3
359,134 - AO353_01710 0.40 +0.9
359,134 - AO353_01710 0.40 -0.2
359,187 + AO353_01710 0.47 -0.9
359,187 + AO353_01710 0.47 -0.3
359,187 + AO353_01710 0.47 -1.5
359,187 + AO353_01710 0.47 -0.9
359,188 - AO353_01710 0.47 -0.5
359,188 - AO353_01710 0.47 -1.0
359,347 - AO353_01710 0.67 +0.9
359,530 - AO353_01710 0.89 +0.0
359,530 - AO353_01710 0.89 -1.1
359,562 + -1.2
359,563 - +0.1
359,563 - -0.6
359,614 + +1.2
359,615 - +0.7
359,655 + -0.2
359,656 - -1.2
359,682 + +0.3
359,683 - +0.5
359,683 - +0.9
359,683 - -1.7
359,717 - +0.3
359,879 + +0.2
359,879 + +1.9
359,902 + +0.7
359,902 + +2.5
359,903 - +0.1
359,903 - -1.4
359,949 + -0.3
359,949 + +0.3
360,009 - AO353_01715 0.21 +1.9
360,118 + AO353_01715 0.45 -1.4
360,119 - AO353_01715 0.46 -2.0
360,119 - AO353_01715 0.46 +0.9
360,178 - AO353_01715 0.59 +0.6
360,178 - AO353_01715 0.59 +0.1
360,208 + AO353_01715 0.66 -0.2
360,279 + AO353_01715 0.82 -1.2
360,279 + AO353_01715 0.82 -0.9
360,279 + AO353_01715 0.82 +0.7
360,279 + AO353_01715 0.82 +0.7
360,279 + AO353_01715 0.82 -0.4
360,279 + AO353_01715 0.82 -0.9
360,279 + AO353_01715 0.82 +0.3
360,279 + AO353_01715 0.82 +0.9
360,279 + AO353_01715 0.82 +1.2
360,279 + AO353_01715 0.82 -1.6
360,279 + AO353_01715 0.82 +0.9
360,279 + AO353_01715 0.82 +0.5
360,279 + AO353_01715 0.82 +0.5
360,279 + AO353_01715 0.82 +2.5
360,280 - AO353_01715 0.82 -0.7
360,280 - AO353_01715 0.82 +0.9
360,280 - AO353_01715 0.82 +1.2
360,280 - AO353_01715 0.82 +0.2
360,280 - AO353_01715 0.82 +0.9
360,280 - AO353_01715 0.82 -0.5
360,280 - AO353_01715 0.82 -0.3
360,280 - AO353_01715 0.82 +0.9
360,281 + AO353_01715 0.82 +0.9
360,382 - -0.8
360,382 - -0.8
360,449 - -0.7
360,714 - AO353_01720 0.19 -0.7
360,724 - AO353_01720 0.20 -0.4
360,760 + AO353_01720 0.22 +0.1
360,760 + AO353_01720 0.22 +0.9
360,760 + AO353_01720 0.22 -1.4
360,761 - AO353_01720 0.22 -0.1
360,761 - AO353_01720 0.22 -0.5
360,761 - AO353_01720 0.22 -0.7
361,022 + AO353_01720 0.38 -0.4
361,022 + AO353_01720 0.38 +0.5
361,023 - AO353_01720 0.38 -1.4
361,023 - AO353_01720 0.38 +0.9
361,023 - AO353_01720 0.38 -0.1
361,023 - AO353_01720 0.38 -0.5
361,054 + AO353_01720 0.40 +1.9
361,055 - AO353_01720 0.40 +0.6
361,134 + AO353_01720 0.45 +0.9
361,134 + AO353_01720 0.45 -1.2
361,243 + AO353_01720 0.51 -0.7
361,243 + AO353_01720 0.51 -1.2
361,244 - AO353_01720 0.51 +1.0
361,244 - AO353_01720 0.51 +0.9
361,244 - AO353_01720 0.51 -0.5

Or see this region's nucleotide sequence