Experiment: L-Aspartic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00655 and AO353_00660 are separated by 79 nucleotides AO353_00660 and AO353_00665 are separated by 78 nucleotides AO353_00665 and AO353_00670 are separated by 120 nucleotides
AO353_00655: AO353_00655 - coproporphyrinogen III oxidase, at 138,696 to 140,078
_00655
AO353_00660: AO353_00660 - transcriptional regulator, at 140,158 to 140,892
_00660
AO353_00665: AO353_00665 - adenine phosphoribosyltransferase, at 140,971 to 141,519
_00665
AO353_00670: AO353_00670 - acyl-CoA dehydrogenase, at 141,640 to 142,788
_00670
Position (kb)
140
141
142 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 140.034 kb on + strand at 140.035 kb on - strand at 140.072 kb on - strand at 140.077 kb on - strand at 140.121 kb on + strand at 140.121 kb on + strand at 140.121 kb on + strand at 140.122 kb on - strand at 140.128 kb on + strand at 140.128 kb on + strand at 140.128 kb on + strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.129 kb on - strand at 140.152 kb on + strand at 140.153 kb on - strand at 140.749 kb on + strand, within AO353_00660 at 140.749 kb on + strand at 140.749 kb on + strand, within AO353_00660 at 140.749 kb on + strand, within AO353_00660 at 140.749 kb on + strand, within AO353_00660 at 140.749 kb on + strand, within AO353_00660 at 140.749 kb on + strand, within AO353_00660 at 140.750 kb on - strand, within AO353_00660 at 140.750 kb on - strand, within AO353_00660 at 140.750 kb on - strand, within AO353_00660 at 140.750 kb on - strand, within AO353_00660 at 140.932 kb on + strand at 140.932 kb on + strand at 140.933 kb on - strand at 140.933 kb on - strand at 140.933 kb on - strand at 140.934 kb on + strand at 140.934 kb on + strand at 140.934 kb on + strand at 140.934 kb on + strand at 140.934 kb on + strand at 140.935 kb on - strand at 140.935 kb on - strand at 140.935 kb on - strand at 140.935 kb on - strand at 140.935 kb on - strand at 140.935 kb on - strand at 140.935 kb on - strand at 140.949 kb on - strand at 141.115 kb on + strand, within AO353_00665 at 141.115 kb on + strand, within AO353_00665 at 141.245 kb on + strand, within AO353_00665 at 141.245 kb on + strand, within AO353_00665 at 141.245 kb on + strand, within AO353_00665 at 141.246 kb on - strand, within AO353_00665 at 141.246 kb on - strand, within AO353_00665 at 141.246 kb on - strand, within AO353_00665 at 141.427 kb on - strand, within AO353_00665 at 141.427 kb on - strand, within AO353_00665 at 141.517 kb on + strand at 141.517 kb on + strand at 141.518 kb on - strand at 141.518 kb on - strand at 141.518 kb on - strand at 141.518 kb on - strand at 141.518 kb on - strand at 141.518 kb on - strand at 141.583 kb on + strand at 141.752 kb on + strand at 141.753 kb on - strand at 141.753 kb on - strand at 141.753 kb on - strand at 142.069 kb on - strand, within AO353_00670 at 142.278 kb on + strand, within AO353_00670 at 142.278 kb on + strand, within AO353_00670 at 142.279 kb on - strand, within AO353_00670 at 142.281 kb on - strand, within AO353_00670 at 142.337 kb on + strand, within AO353_00670 at 142.337 kb on + strand, within AO353_00670 at 142.337 kb on + strand, within AO353_00670 at 142.338 kb on - strand, within AO353_00670 at 142.338 kb on - strand, within AO353_00670 at 142.338 kb on - strand, within AO353_00670
Per-strain Table
Position Strand Gene LocusTag Fraction L-Aspartic Acid (C) remove 140,034 + -0.7 140,035 - -1.7 140,072 - +0.3 140,077 - -0.4 140,121 + +0.2 140,121 + -1.8 140,121 + +0.8 140,122 - -0.2 140,128 + +0.1 140,128 + -0.5 140,128 + +0.8 140,129 - -0.2 140,129 - +0.6 140,129 - -1.1 140,129 - +2.2 140,129 - -2.4 140,129 - +1.8 140,129 - +0.2 140,129 - -1.5 140,129 - -0.5 140,129 - -1.4 140,129 - -1.4 140,129 - +0.2 140,152 + -0.2 140,153 - -0.8 140,749 + AO353_00660 0.80 +0.2 140,749 + +1.2 140,749 + AO353_00660 0.80 -1.0 140,749 + AO353_00660 0.80 +1.5 140,749 + AO353_00660 0.80 +1.0 140,749 + AO353_00660 0.80 -0.2 140,749 + AO353_00660 0.80 -0.5 140,750 - AO353_00660 0.81 -0.0 140,750 - AO353_00660 0.81 -0.5 140,750 - AO353_00660 0.81 -0.3 140,750 - AO353_00660 0.81 -0.2 140,932 + -0.0 140,932 + +0.4 140,933 - +0.7 140,933 - -2.0 140,933 - +0.8 140,934 + +0.8 140,934 + -1.0 140,934 + +0.8 140,934 + -0.4 140,934 + +1.8 140,935 - -0.8 140,935 - +0.5 140,935 - +0.7 140,935 - -0.3 140,935 - -0.2 140,935 - -0.4 140,935 - -0.4 140,949 - +0.3 141,115 + AO353_00665 0.26 +0.6 141,115 + AO353_00665 0.26 +0.8 141,245 + AO353_00665 0.50 -0.8 141,245 + AO353_00665 0.50 +1.2 141,245 + AO353_00665 0.50 +0.2 141,246 - AO353_00665 0.50 +0.2 141,246 - AO353_00665 0.50 +0.4 141,246 - AO353_00665 0.50 +1.1 141,427 - AO353_00665 0.83 -0.8 141,427 - AO353_00665 0.83 +0.8 141,517 + +0.4 141,517 + +1.2 141,518 - -0.1 141,518 - -0.2 141,518 - -1.4 141,518 - +0.8 141,518 - -0.7 141,518 - -0.1 141,583 + -1.5 141,752 + +0.3 141,753 - +0.8 141,753 - -1.2 141,753 - +0.8 142,069 - AO353_00670 0.37 +0.8 142,278 + AO353_00670 0.56 -1.5 142,278 + AO353_00670 0.56 +0.3 142,279 - AO353_00670 0.56 -0.9 142,281 - AO353_00670 0.56 +0.6 142,337 + AO353_00670 0.61 -1.8 142,337 + AO353_00670 0.61 +0.2 142,337 + AO353_00670 0.61 -0.2 142,338 - AO353_00670 0.61 -0.4 142,338 - AO353_00670 0.61 +1.5 142,338 - AO353_00670 0.61 -0.5
Or see this region's nucleotide sequence