Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_3036 and DvMF_3037 are separated by 154 nucleotides DvMF_3037 and DvMF_3038 are separated by 203 nucleotides DvMF_3038 and DvMF_3039 are separated by 177 nucleotides
DvMF_3036: DvMF_3036 - cytochrome c biogenesis protein transmembrane region (RefSeq), at 3,832,307 to 3,834,502
_3036
DvMF_3037: DvMF_3037 - hypothetical protein (RefSeq), at 3,834,657 to 3,835,175
_3037
DvMF_3038: DvMF_3038 - transcriptional regulator, TetR family (RefSeq), at 3,835,379 to 3,836,008
_3038
DvMF_3039: DvMF_3039 - peptidase M24 (RefSeq), at 3,836,186 to 3,837,445
_3039
Position (kb)
3835
3836
3837 Strain fitness (log2 ratio)
-1
0
1 at 3834.385 kb on + strand at 3834.600 kb on + strand at 3834.655 kb on + strand at 3834.755 kb on - strand, within DvMF_3037 at 3834.781 kb on - strand, within DvMF_3037 at 3834.781 kb on - strand, within DvMF_3037 at 3834.784 kb on + strand, within DvMF_3037 at 3834.941 kb on + strand, within DvMF_3037 at 3835.253 kb on + strand at 3835.316 kb on + strand at 3836.312 kb on + strand, within DvMF_3039 at 3836.522 kb on + strand, within DvMF_3039 at 3836.522 kb on + strand, within DvMF_3039 at 3836.522 kb on + strand, within DvMF_3039 at 3836.642 kb on + strand, within DvMF_3039 at 3836.952 kb on + strand, within DvMF_3039 at 3837.001 kb on - strand, within DvMF_3039 at 3837.001 kb on - strand, within DvMF_3039 at 3837.001 kb on - strand, within DvMF_3039
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 3,834,385 + -0.4 3,834,600 + -0.5 3,834,655 + -0.4 3,834,755 - DvMF_3037 0.19 -0.3 3,834,781 - DvMF_3037 0.24 -1.4 3,834,781 - DvMF_3037 0.24 -1.7 3,834,784 + DvMF_3037 0.24 -0.5 3,834,941 + DvMF_3037 0.55 -0.1 3,835,253 + -0.2 3,835,316 + +0.2 3,836,312 + DvMF_3039 0.10 -0.8 3,836,522 + DvMF_3039 0.27 -1.6 3,836,522 + DvMF_3039 0.27 -1.5 3,836,522 + DvMF_3039 0.27 -1.2 3,836,642 + DvMF_3039 0.36 -1.4 3,836,952 + DvMF_3039 0.61 -0.8 3,837,001 - DvMF_3039 0.65 -1.1 3,837,001 - DvMF_3039 0.65 -0.6 3,837,001 - DvMF_3039 0.65 -1.7
Or see this region's nucleotide sequence