Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2582 and DvMF_2583 are separated by 427 nucleotides DvMF_2583 and DvMF_2584 are separated by 3 nucleotides
DvMF_2582: DvMF_2582 - dihydroxyacetone kinase subunit DhaK (RefSeq), at 3,265,869 to 3,266,933
_2582
DvMF_2583: DvMF_2583 - dihydroxyacetone kinase, L subunit (RefSeq), at 3,267,361 to 3,267,993
_2583
DvMF_2584: DvMF_2584 - phosphoenolpyruvate-protein phosphotransferase (RefSeq), at 3,267,997 to 3,270,537
_2584
Position (kb)
3267
3268 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3266.373 kb on + strand, within DvMF_2582 at 3266.531 kb on - strand, within DvMF_2582 at 3266.544 kb on + strand, within DvMF_2582 at 3266.554 kb on - strand, within DvMF_2582 at 3266.563 kb on + strand, within DvMF_2582 at 3266.604 kb on + strand, within DvMF_2582 at 3266.612 kb on - strand, within DvMF_2582 at 3266.705 kb on - strand, within DvMF_2582 at 3266.928 kb on + strand at 3267.001 kb on - strand at 3267.001 kb on - strand at 3267.138 kb on - strand at 3267.501 kb on - strand, within DvMF_2583 at 3267.643 kb on - strand, within DvMF_2583 at 3267.934 kb on + strand at 3268.211 kb on - strand at 3268.213 kb on + strand at 3268.269 kb on + strand, within DvMF_2584 at 3268.349 kb on - strand, within DvMF_2584 at 3268.371 kb on - strand, within DvMF_2584 at 3268.416 kb on + strand, within DvMF_2584 at 3268.597 kb on + strand, within DvMF_2584 at 3268.918 kb on - strand, within DvMF_2584
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 3,266,373 + DvMF_2582 0.47 +0.4 3,266,531 - DvMF_2582 0.62 -0.1 3,266,544 + DvMF_2582 0.63 -0.4 3,266,554 - DvMF_2582 0.64 +0.0 3,266,563 + DvMF_2582 0.65 -0.2 3,266,604 + DvMF_2582 0.69 -0.0 3,266,612 - DvMF_2582 0.70 -0.4 3,266,705 - DvMF_2582 0.78 -0.0 3,266,928 + -0.6 3,267,001 - -0.2 3,267,001 - -0.3 3,267,138 - -0.1 3,267,501 - DvMF_2583 0.22 +0.7 3,267,643 - DvMF_2583 0.45 -0.1 3,267,934 + -4.2 3,268,211 - +0.5 3,268,213 + -0.2 3,268,269 + DvMF_2584 0.11 -0.8 3,268,349 - DvMF_2584 0.14 +0.3 3,268,371 - DvMF_2584 0.15 -0.1 3,268,416 + DvMF_2584 0.16 +0.5 3,268,597 + DvMF_2584 0.24 +0.4 3,268,918 - DvMF_2584 0.36 -0.3
Or see this region's nucleotide sequence