Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2581 and DvMF_2582 are separated by 344 nucleotides DvMF_2582 and DvMF_2583 are separated by 427 nucleotides
DvMF_2581: DvMF_2581 - cation diffusion facilitator family transporter (RefSeq), at 3,264,547 to 3,265,524
_2581
DvMF_2582: DvMF_2582 - dihydroxyacetone kinase subunit DhaK (RefSeq), at 3,265,869 to 3,266,933
_2582
DvMF_2583: DvMF_2583 - dihydroxyacetone kinase, L subunit (RefSeq), at 3,267,361 to 3,267,993
_2583
Position (kb)
3265
3266
3267 Strain fitness (log2 ratio)
-1
0
1 at 3264.960 kb on - strand, within DvMF_2581 at 3264.970 kb on + strand, within DvMF_2581 at 3265.042 kb on + strand, within DvMF_2581 at 3265.093 kb on - strand, within DvMF_2581 at 3265.168 kb on - strand, within DvMF_2581 at 3265.170 kb on + strand, within DvMF_2581 at 3265.173 kb on - strand, within DvMF_2581 at 3265.434 kb on + strand at 3265.785 kb on + strand at 3265.798 kb on - strand at 3266.002 kb on - strand, within DvMF_2582 at 3266.062 kb on + strand, within DvMF_2582 at 3266.067 kb on + strand, within DvMF_2582 at 3266.102 kb on - strand, within DvMF_2582 at 3266.185 kb on - strand, within DvMF_2582 at 3266.291 kb on + strand, within DvMF_2582 at 3266.323 kb on - strand, within DvMF_2582 at 3266.373 kb on + strand, within DvMF_2582 at 3266.531 kb on - strand, within DvMF_2582 at 3266.544 kb on + strand, within DvMF_2582 at 3266.554 kb on - strand, within DvMF_2582 at 3266.563 kb on + strand, within DvMF_2582 at 3266.604 kb on + strand, within DvMF_2582 at 3266.612 kb on - strand, within DvMF_2582 at 3266.705 kb on - strand, within DvMF_2582 at 3266.928 kb on + strand at 3267.001 kb on - strand at 3267.001 kb on - strand at 3267.138 kb on - strand at 3267.501 kb on - strand, within DvMF_2583 at 3267.643 kb on - strand, within DvMF_2583
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 3,264,960 - DvMF_2581 0.42 -0.2 3,264,970 + DvMF_2581 0.43 -0.2 3,265,042 + DvMF_2581 0.51 -0.3 3,265,093 - DvMF_2581 0.56 -1.6 3,265,168 - DvMF_2581 0.63 -0.3 3,265,170 + DvMF_2581 0.64 -0.6 3,265,173 - DvMF_2581 0.64 -0.5 3,265,434 + -0.8 3,265,785 + -0.7 3,265,798 - -0.2 3,266,002 - DvMF_2582 0.12 -0.2 3,266,062 + DvMF_2582 0.18 -0.2 3,266,067 + DvMF_2582 0.19 -0.1 3,266,102 - DvMF_2582 0.22 +0.5 3,266,185 - DvMF_2582 0.30 -0.1 3,266,291 + DvMF_2582 0.40 -0.1 3,266,323 - DvMF_2582 0.43 +1.4 3,266,373 + DvMF_2582 0.47 +0.4 3,266,531 - DvMF_2582 0.62 -0.1 3,266,544 + DvMF_2582 0.63 -0.4 3,266,554 - DvMF_2582 0.64 +0.0 3,266,563 + DvMF_2582 0.65 -0.2 3,266,604 + DvMF_2582 0.69 -0.0 3,266,612 - DvMF_2582 0.70 -0.4 3,266,705 - DvMF_2582 0.78 -0.0 3,266,928 + -0.6 3,267,001 - -0.2 3,267,001 - -0.3 3,267,138 - -0.1 3,267,501 - DvMF_2583 0.22 +0.7 3,267,643 - DvMF_2583 0.45 -0.1
Or see this region's nucleotide sequence