Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2230 and DvMF_2231 are separated by 155 nucleotides DvMF_2231 and DvMF_2232 are separated by 102 nucleotides
DvMF_2230: DvMF_2230 - hydrolase, TatD family (RefSeq), at 2,791,493 to 2,792,314
_2230
DvMF_2231: DvMF_2231 - protein of unknown function DUF309 (RefSeq), at 2,792,470 to 2,792,892
_2231
DvMF_2232: DvMF_2232 - carbon monoxide dehydrogenase accessory protein CooC, putative (RefSeq), at 2,792,995 to 2,793,846
_2232
Position (kb)
2792
2793 Strain fitness (log2 ratio)
-1
0
1 at 2791.607 kb on + strand, within DvMF_2230 at 2791.632 kb on + strand, within DvMF_2230 at 2791.650 kb on - strand, within DvMF_2230 at 2791.672 kb on - strand, within DvMF_2230 at 2791.730 kb on + strand, within DvMF_2230 at 2791.753 kb on - strand, within DvMF_2230 at 2791.801 kb on - strand, within DvMF_2230 at 2791.917 kb on + strand, within DvMF_2230 at 2792.309 kb on + strand at 2792.473 kb on - strand at 2792.598 kb on - strand, within DvMF_2231 at 2792.637 kb on + strand, within DvMF_2231 at 2792.823 kb on + strand, within DvMF_2231 at 2793.013 kb on - strand at 2793.108 kb on + strand, within DvMF_2232 at 2793.276 kb on + strand, within DvMF_2232 at 2793.276 kb on + strand, within DvMF_2232 at 2793.276 kb on + strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.284 kb on - strand, within DvMF_2232 at 2793.291 kb on - strand, within DvMF_2232 at 2793.466 kb on - strand, within DvMF_2232 at 2793.565 kb on + strand, within DvMF_2232 at 2793.624 kb on + strand, within DvMF_2232 at 2793.708 kb on - strand, within DvMF_2232 at 2793.727 kb on - strand, within DvMF_2232
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 2,791,607 + DvMF_2230 0.14 +1.0 2,791,632 + DvMF_2230 0.17 -0.0 2,791,650 - DvMF_2230 0.19 -0.3 2,791,672 - DvMF_2230 0.22 -0.3 2,791,730 + DvMF_2230 0.29 -0.4 2,791,753 - DvMF_2230 0.32 +0.3 2,791,801 - DvMF_2230 0.37 -1.0 2,791,917 + DvMF_2230 0.52 -0.4 2,792,309 + -0.4 2,792,473 - -0.2 2,792,598 - DvMF_2231 0.30 -1.0 2,792,637 + DvMF_2231 0.39 -1.0 2,792,823 + DvMF_2231 0.83 -0.7 2,793,013 - -1.4 2,793,108 + DvMF_2232 0.13 -0.3 2,793,276 + DvMF_2232 0.33 -0.6 2,793,276 + DvMF_2232 0.33 -0.3 2,793,276 + DvMF_2232 0.33 -0.4 2,793,284 - DvMF_2232 0.34 -0.3 2,793,284 - DvMF_2232 0.34 -0.3 2,793,284 - DvMF_2232 0.34 -0.2 2,793,284 - DvMF_2232 0.34 -0.0 2,793,284 - DvMF_2232 0.34 -0.1 2,793,284 - DvMF_2232 0.34 -0.7 2,793,284 - DvMF_2232 0.34 -0.9 2,793,291 - DvMF_2232 0.35 -0.3 2,793,466 - DvMF_2232 0.55 -0.1 2,793,565 + DvMF_2232 0.67 -0.9 2,793,624 + DvMF_2232 0.74 -1.2 2,793,708 - DvMF_2232 0.84 -0.1 2,793,727 - DvMF_2232 0.86 -0.3
Or see this region's nucleotide sequence