Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2095 and DvMF_2096 are separated by 19 nucleotides DvMF_2096 and DvMF_2097 are separated by 558 nucleotides DvMF_2097 and DvMF_2098 are separated by 280 nucleotides
DvMF_2095: DvMF_2095 - two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq), at 2,611,155 to 2,612,570
_2095
DvMF_2096: DvMF_2096 - hypothetical protein (RefSeq), at 2,612,590 to 2,612,928
_2096
DvMF_2097: DvMF_2097 - NADPH-dependent FMN reductase (RefSeq), at 2,613,487 to 2,614,197
_2097
DvMF_2098: DvMF_2098 - major facilitator superfamily MFS_1 (RefSeq), at 2,614,478 to 2,615,878
_2098
Position (kb)
2613
2614
2615 Strain fitness (log2 ratio)
-1
0
1 at 2612.550 kb on + strand at 2612.649 kb on + strand, within DvMF_2096 at 2612.682 kb on - strand, within DvMF_2096 at 2613.064 kb on - strand at 2613.168 kb on - strand at 2613.541 kb on - strand at 2613.543 kb on + strand at 2613.718 kb on - strand, within DvMF_2097 at 2614.104 kb on - strand, within DvMF_2097 at 2614.199 kb on - strand at 2614.206 kb on + strand at 2614.232 kb on - strand at 2614.241 kb on - strand at 2614.328 kb on - strand at 2614.534 kb on - strand at 2614.712 kb on + strand, within DvMF_2098 at 2614.795 kb on + strand, within DvMF_2098 at 2614.803 kb on - strand, within DvMF_2098 at 2614.803 kb on - strand, within DvMF_2098 at 2615.104 kb on + strand, within DvMF_2098 at 2615.137 kb on - strand, within DvMF_2098
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 2,612,550 + -0.1 2,612,649 + DvMF_2096 0.17 -0.4 2,612,682 - DvMF_2096 0.27 -0.3 2,613,064 - -0.4 2,613,168 - -0.6 2,613,541 - -0.5 2,613,543 + -0.3 2,613,718 - DvMF_2097 0.32 -0.5 2,614,104 - DvMF_2097 0.87 -0.6 2,614,199 - -0.1 2,614,206 + -0.2 2,614,232 - -0.5 2,614,241 - +0.4 2,614,328 - -0.9 2,614,534 - -0.3 2,614,712 + DvMF_2098 0.17 -0.4 2,614,795 + DvMF_2098 0.23 -0.2 2,614,803 - DvMF_2098 0.23 -0.9 2,614,803 - DvMF_2098 0.23 +0.4 2,615,104 + DvMF_2098 0.45 +0.0 2,615,137 - DvMF_2098 0.47 -0.1
Or see this region's nucleotide sequence