Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1853 and DvMF_1854 are separated by 108 nucleotides DvMF_1854 and DvMF_1855 are separated by 2 nucleotides DvMF_1855 and DvMF_1856 are separated by 56 nucleotides
DvMF_1853: DvMF_1853 - glycosyl transferase group 1 (RefSeq), at 2,267,161 to 2,268,318
_1853
DvMF_1854: DvMF_1854 - NAD-dependent epimerase/dehydratase (RefSeq), at 2,268,427 to 2,269,359
_1854
DvMF_1855: DvMF_1855 - glycosyltransferase-like protein (RefSeq), at 2,269,362 to 2,270,138
_1855
DvMF_1856: DvMF_1856 - hypothetical protein (RefSeq), at 2,270,195 to 2,270,572
_1856
Position (kb)
2268
2269
2270 Strain fitness (log2 ratio)
-1
0
1 at 2267.446 kb on - strand, within DvMF_1853 at 2267.679 kb on - strand, within DvMF_1853 at 2267.842 kb on - strand, within DvMF_1853 at 2267.916 kb on + strand, within DvMF_1853 at 2267.937 kb on - strand, within DvMF_1853 at 2268.015 kb on - strand, within DvMF_1853 at 2268.052 kb on - strand, within DvMF_1853 at 2268.057 kb on - strand, within DvMF_1853 at 2268.667 kb on - strand, within DvMF_1854 at 2268.837 kb on + strand, within DvMF_1854 at 2268.937 kb on + strand, within DvMF_1854 at 2269.043 kb on - strand, within DvMF_1854 at 2269.068 kb on + strand, within DvMF_1854 at 2269.143 kb on - strand, within DvMF_1854 at 2269.143 kb on - strand, within DvMF_1854 at 2269.451 kb on + strand, within DvMF_1855 at 2269.478 kb on - strand, within DvMF_1855 at 2269.675 kb on - strand, within DvMF_1855 at 2269.675 kb on - strand, within DvMF_1855 at 2269.682 kb on - strand, within DvMF_1855 at 2269.754 kb on + strand, within DvMF_1855 at 2269.859 kb on - strand, within DvMF_1855 at 2269.879 kb on + strand, within DvMF_1855 at 2269.887 kb on - strand, within DvMF_1855 at 2270.019 kb on - strand, within DvMF_1855 at 2270.065 kb on - strand at 2270.065 kb on - strand at 2270.065 kb on - strand at 2270.065 kb on - strand at 2270.192 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 2,267,446 - DvMF_1853 0.25 -0.6 2,267,679 - DvMF_1853 0.45 -0.4 2,267,842 - DvMF_1853 0.59 -0.5 2,267,916 + DvMF_1853 0.65 -1.5 2,267,937 - DvMF_1853 0.67 -0.3 2,268,015 - DvMF_1853 0.74 +0.2 2,268,052 - DvMF_1853 0.77 -0.3 2,268,057 - DvMF_1853 0.77 -0.2 2,268,667 - DvMF_1854 0.26 -0.7 2,268,837 + DvMF_1854 0.44 -0.1 2,268,937 + DvMF_1854 0.55 -0.1 2,269,043 - DvMF_1854 0.66 -0.3 2,269,068 + DvMF_1854 0.69 -0.8 2,269,143 - DvMF_1854 0.77 -0.2 2,269,143 - DvMF_1854 0.77 -0.3 2,269,451 + DvMF_1855 0.11 -0.6 2,269,478 - DvMF_1855 0.15 -0.3 2,269,675 - DvMF_1855 0.40 -0.3 2,269,675 - DvMF_1855 0.40 +0.1 2,269,682 - DvMF_1855 0.41 -0.4 2,269,754 + DvMF_1855 0.50 -0.9 2,269,859 - DvMF_1855 0.64 -0.2 2,269,879 + DvMF_1855 0.67 -0.3 2,269,887 - DvMF_1855 0.68 -0.9 2,270,019 - DvMF_1855 0.85 -0.0 2,270,065 - -0.0 2,270,065 - -0.1 2,270,065 - -0.5 2,270,065 - -0.2 2,270,192 + -0.4
Or see this region's nucleotide sequence