Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1836 and DvMF_1837 overlap by 4 nucleotides DvMF_1837 and DvMF_1838 overlap by 8 nucleotides
DvMF_1836: DvMF_1836 - methyltransferase FkbM family (RefSeq), at 2,241,306 to 2,246,327
_1836
DvMF_1837: DvMF_1837 - glycosyl transferase family 2 (RefSeq), at 2,246,324 to 2,247,376
_1837
DvMF_1838: DvMF_1838 - Radical SAM domain protein (RefSeq), at 2,247,369 to 2,248,844
_1838
Position (kb)
2246
2247
2248 Strain fitness (log2 ratio)
-1
0
1 at 2245.372 kb on - strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.634 kb on - strand, within DvMF_1836 at 2245.653 kb on - strand, within DvMF_1836 at 2245.705 kb on - strand, within DvMF_1836 at 2245.727 kb on + strand, within DvMF_1836 at 2245.786 kb on - strand, within DvMF_1836 at 2245.786 kb on - strand, within DvMF_1836 at 2245.864 kb on - strand at 2245.888 kb on + strand at 2246.014 kb on - strand at 2246.053 kb on + strand at 2246.216 kb on + strand at 2246.321 kb on + strand at 2246.341 kb on - strand at 2246.341 kb on - strand at 2246.368 kb on + strand at 2246.381 kb on - strand at 2246.388 kb on + strand at 2246.445 kb on + strand, within DvMF_1837 at 2246.687 kb on - strand, within DvMF_1837 at 2247.278 kb on + strand at 2247.311 kb on + strand at 2247.652 kb on - strand, within DvMF_1838 at 2247.667 kb on + strand, within DvMF_1838 at 2247.779 kb on + strand, within DvMF_1838 at 2247.804 kb on - strand, within DvMF_1838 at 2247.825 kb on - strand, within DvMF_1838 at 2247.863 kb on + strand, within DvMF_1838 at 2247.871 kb on - strand, within DvMF_1838 at 2247.916 kb on - strand, within DvMF_1838 at 2248.023 kb on + strand, within DvMF_1838 at 2248.144 kb on + strand, within DvMF_1838 at 2248.152 kb on - strand, within DvMF_1838 at 2248.157 kb on - strand, within DvMF_1838 at 2248.235 kb on - strand, within DvMF_1838 at 2248.274 kb on + strand, within DvMF_1838 at 2248.302 kb on + strand, within DvMF_1838 at 2248.341 kb on + strand, within DvMF_1838
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 2,245,372 - DvMF_1836 0.81 +0.7 2,245,626 + DvMF_1836 0.86 -0.3 2,245,626 + DvMF_1836 0.86 +0.4 2,245,626 + DvMF_1836 0.86 -0.1 2,245,626 + DvMF_1836 0.86 -0.4 2,245,626 + DvMF_1836 0.86 -0.3 2,245,626 + DvMF_1836 0.86 +0.5 2,245,634 - DvMF_1836 0.86 -0.2 2,245,653 - DvMF_1836 0.87 -0.5 2,245,705 - DvMF_1836 0.88 -0.3 2,245,727 + DvMF_1836 0.88 +0.5 2,245,786 - DvMF_1836 0.89 -0.6 2,245,786 - DvMF_1836 0.89 -0.4 2,245,864 - -0.2 2,245,888 + -0.7 2,246,014 - -0.1 2,246,053 + -0.3 2,246,216 + -0.4 2,246,321 + -0.2 2,246,341 - -0.3 2,246,341 - -0.4 2,246,368 + -0.5 2,246,381 - -0.3 2,246,388 + -0.8 2,246,445 + DvMF_1837 0.11 +0.4 2,246,687 - DvMF_1837 0.34 +1.1 2,247,278 + -0.7 2,247,311 + -0.3 2,247,652 - DvMF_1838 0.19 -0.8 2,247,667 + DvMF_1838 0.20 -0.5 2,247,779 + DvMF_1838 0.28 -0.4 2,247,804 - DvMF_1838 0.29 -0.6 2,247,825 - DvMF_1838 0.31 +0.0 2,247,863 + DvMF_1838 0.33 -0.7 2,247,871 - DvMF_1838 0.34 -0.3 2,247,916 - DvMF_1838 0.37 -0.3 2,248,023 + DvMF_1838 0.44 -0.3 2,248,144 + DvMF_1838 0.53 -0.2 2,248,152 - DvMF_1838 0.53 -0.0 2,248,157 - DvMF_1838 0.53 -0.3 2,248,235 - DvMF_1838 0.59 +0.1 2,248,274 + DvMF_1838 0.61 -0.3 2,248,302 + DvMF_1838 0.63 -0.2 2,248,341 + DvMF_1838 0.66 +0.2
Or see this region's nucleotide sequence