Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1834 and DvMF_1835 overlap by 4 nucleotides DvMF_1835 and DvMF_1836 are separated by 99 nucleotides DvMF_1836 and DvMF_1837 overlap by 4 nucleotides
DvMF_1834: DvMF_1834 - acylneuraminate cytidylyltransferase (RefSeq), at 2,238,370 to 2,240,433
_1834
DvMF_1835: DvMF_1835 - putative methyltransferase (RefSeq), at 2,240,430 to 2,241,206
_1835
DvMF_1836: DvMF_1836 - methyltransferase FkbM family (RefSeq), at 2,241,306 to 2,246,327
_1836
DvMF_1837: DvMF_1837 - glycosyl transferase family 2 (RefSeq), at 2,246,324 to 2,247,376
_1837
Position (kb)
2241
2242
2243
2244
2245
2246
2247 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2240.361 kb on + strand at 2240.457 kb on - strand at 2240.509 kb on - strand, within DvMF_1835 at 2240.509 kb on - strand, within DvMF_1835 at 2240.509 kb on - strand, within DvMF_1835 at 2240.509 kb on - strand, within DvMF_1835 at 2240.571 kb on - strand, within DvMF_1835 at 2240.577 kb on - strand, within DvMF_1835 at 2240.623 kb on - strand, within DvMF_1835 at 2240.630 kb on + strand, within DvMF_1835 at 2240.750 kb on + strand, within DvMF_1835 at 2240.802 kb on + strand, within DvMF_1835 at 2241.006 kb on - strand, within DvMF_1835 at 2241.007 kb on - strand, within DvMF_1835 at 2241.035 kb on - strand, within DvMF_1835 at 2241.128 kb on + strand, within DvMF_1835 at 2241.164 kb on - strand at 2241.189 kb on + strand at 2241.194 kb on + strand at 2241.340 kb on - strand at 2241.342 kb on + strand at 2241.375 kb on - strand at 2241.661 kb on - strand at 2241.739 kb on + strand at 2241.874 kb on + strand, within DvMF_1836 at 2241.954 kb on - strand, within DvMF_1836 at 2241.954 kb on - strand, within DvMF_1836 at 2242.015 kb on - strand, within DvMF_1836 at 2242.144 kb on - strand, within DvMF_1836 at 2242.228 kb on + strand, within DvMF_1836 at 2242.232 kb on - strand, within DvMF_1836 at 2242.251 kb on - strand, within DvMF_1836 at 2242.578 kb on + strand, within DvMF_1836 at 2242.608 kb on - strand, within DvMF_1836 at 2242.690 kb on - strand, within DvMF_1836 at 2243.111 kb on - strand, within DvMF_1836 at 2243.156 kb on - strand, within DvMF_1836 at 2243.161 kb on - strand, within DvMF_1836 at 2243.192 kb on + strand, within DvMF_1836 at 2243.239 kb on + strand, within DvMF_1836 at 2243.249 kb on + strand, within DvMF_1836 at 2243.390 kb on + strand, within DvMF_1836 at 2243.497 kb on - strand, within DvMF_1836 at 2243.497 kb on - strand, within DvMF_1836 at 2243.641 kb on + strand, within DvMF_1836 at 2243.676 kb on + strand, within DvMF_1836 at 2243.732 kb on - strand, within DvMF_1836 at 2243.783 kb on - strand, within DvMF_1836 at 2243.858 kb on - strand, within DvMF_1836 at 2244.222 kb on + strand, within DvMF_1836 at 2244.461 kb on + strand, within DvMF_1836 at 2244.464 kb on - strand, within DvMF_1836 at 2244.469 kb on - strand, within DvMF_1836 at 2244.510 kb on + strand, within DvMF_1836 at 2244.598 kb on - strand, within DvMF_1836 at 2244.605 kb on + strand, within DvMF_1836 at 2244.605 kb on + strand, within DvMF_1836 at 2244.613 kb on - strand, within DvMF_1836 at 2244.629 kb on + strand, within DvMF_1836 at 2244.736 kb on - strand, within DvMF_1836 at 2245.115 kb on - strand, within DvMF_1836 at 2245.161 kb on + strand, within DvMF_1836 at 2245.209 kb on + strand, within DvMF_1836 at 2245.372 kb on - strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.626 kb on + strand, within DvMF_1836 at 2245.634 kb on - strand, within DvMF_1836 at 2245.653 kb on - strand, within DvMF_1836 at 2245.705 kb on - strand, within DvMF_1836 at 2245.727 kb on + strand, within DvMF_1836 at 2245.786 kb on - strand, within DvMF_1836 at 2245.786 kb on - strand, within DvMF_1836 at 2245.864 kb on - strand at 2245.888 kb on + strand at 2246.014 kb on - strand at 2246.053 kb on + strand at 2246.216 kb on + strand at 2246.321 kb on + strand at 2246.341 kb on - strand at 2246.341 kb on - strand at 2246.368 kb on + strand at 2246.381 kb on - strand at 2246.388 kb on + strand at 2246.445 kb on + strand, within DvMF_1837 at 2246.687 kb on - strand, within DvMF_1837 at 2247.278 kb on + strand at 2247.311 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 2,240,361 + -0.3 2,240,457 - -0.2 2,240,509 - DvMF_1835 0.10 -0.4 2,240,509 - DvMF_1835 0.10 -0.8 2,240,509 - DvMF_1835 0.10 -0.1 2,240,509 - DvMF_1835 0.10 -1.0 2,240,571 - DvMF_1835 0.18 -0.2 2,240,577 - DvMF_1835 0.19 -0.4 2,240,623 - DvMF_1835 0.25 -0.2 2,240,630 + DvMF_1835 0.26 -0.4 2,240,750 + DvMF_1835 0.41 -0.2 2,240,802 + DvMF_1835 0.48 -0.2 2,241,006 - DvMF_1835 0.74 +0.7 2,241,007 - DvMF_1835 0.74 -0.1 2,241,035 - DvMF_1835 0.78 -0.1 2,241,128 + DvMF_1835 0.90 +0.5 2,241,164 - -0.4 2,241,189 + +0.1 2,241,194 + -0.1 2,241,340 - -0.2 2,241,342 + -0.3 2,241,375 - -0.3 2,241,661 - -0.2 2,241,739 + +0.3 2,241,874 + DvMF_1836 0.11 -0.2 2,241,954 - DvMF_1836 0.13 -0.7 2,241,954 - DvMF_1836 0.13 +0.3 2,242,015 - DvMF_1836 0.14 -0.3 2,242,144 - DvMF_1836 0.17 -0.4 2,242,228 + DvMF_1836 0.18 -0.1 2,242,232 - DvMF_1836 0.18 -0.1 2,242,251 - DvMF_1836 0.19 -0.4 2,242,578 + DvMF_1836 0.25 -0.1 2,242,608 - DvMF_1836 0.26 -0.2 2,242,690 - DvMF_1836 0.28 -0.8 2,243,111 - DvMF_1836 0.36 -2.8 2,243,156 - DvMF_1836 0.37 -0.4 2,243,161 - DvMF_1836 0.37 +1.0 2,243,192 + DvMF_1836 0.38 -0.3 2,243,239 + DvMF_1836 0.38 +0.0 2,243,249 + DvMF_1836 0.39 -0.3 2,243,390 + DvMF_1836 0.41 +0.3 2,243,497 - DvMF_1836 0.44 -0.5 2,243,497 - DvMF_1836 0.44 +0.5 2,243,641 + DvMF_1836 0.46 -0.6 2,243,676 + DvMF_1836 0.47 -0.4 2,243,732 - DvMF_1836 0.48 -0.2 2,243,783 - DvMF_1836 0.49 -0.3 2,243,858 - DvMF_1836 0.51 -0.1 2,244,222 + DvMF_1836 0.58 -0.2 2,244,461 + DvMF_1836 0.63 +0.1 2,244,464 - DvMF_1836 0.63 -0.2 2,244,469 - DvMF_1836 0.63 -0.1 2,244,510 + DvMF_1836 0.64 -0.3 2,244,598 - DvMF_1836 0.66 +0.2 2,244,605 + DvMF_1836 0.66 -0.4 2,244,605 + DvMF_1836 0.66 -0.3 2,244,613 - DvMF_1836 0.66 -0.2 2,244,629 + DvMF_1836 0.66 -0.4 2,244,736 - DvMF_1836 0.68 -0.4 2,245,115 - DvMF_1836 0.76 -0.4 2,245,161 + DvMF_1836 0.77 -0.2 2,245,209 + DvMF_1836 0.78 -0.4 2,245,372 - DvMF_1836 0.81 +0.7 2,245,626 + DvMF_1836 0.86 -0.3 2,245,626 + DvMF_1836 0.86 +0.4 2,245,626 + DvMF_1836 0.86 -0.1 2,245,626 + DvMF_1836 0.86 -0.4 2,245,626 + DvMF_1836 0.86 -0.3 2,245,626 + DvMF_1836 0.86 +0.5 2,245,634 - DvMF_1836 0.86 -0.2 2,245,653 - DvMF_1836 0.87 -0.5 2,245,705 - DvMF_1836 0.88 -0.3 2,245,727 + DvMF_1836 0.88 +0.5 2,245,786 - DvMF_1836 0.89 -0.6 2,245,786 - DvMF_1836 0.89 -0.4 2,245,864 - -0.2 2,245,888 + -0.7 2,246,014 - -0.1 2,246,053 + -0.3 2,246,216 + -0.4 2,246,321 + -0.2 2,246,341 - -0.3 2,246,341 - -0.4 2,246,368 + -0.5 2,246,381 - -0.3 2,246,388 + -0.8 2,246,445 + DvMF_1837 0.11 +0.4 2,246,687 - DvMF_1837 0.34 +1.1 2,247,278 + -0.7 2,247,311 + -0.3
Or see this region's nucleotide sequence