Experiment: 6 days starvation
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0841 and DvMF_0842 are separated by 165 nucleotides DvMF_0842 and DvMF_0843 are separated by 154 nucleotides DvMF_0843 and DvMF_0844 are separated by 424 nucleotides
DvMF_0841: DvMF_0841 - glycogen/starch synthase, ADP-glucose type (RefSeq), at 1,016,479 to 1,017,945
_0841
DvMF_0842: DvMF_0842 - NUDIX hydrolase (RefSeq), at 1,018,111 to 1,018,641
_0842
DvMF_0843: DvMF_0843 - glycosyl transferase family 9 (RefSeq), at 1,018,796 to 1,020,058
_0843
DvMF_0844: DvMF_0844 - Sua5/YciO/YrdC/YwlC family protein (RefSeq), at 1,020,483 to 1,021,139
_0844
Position (kb)
1018
1019
1020
1021 Strain fitness (log2 ratio)
-1
0
1 at 1017.860 kb on - strand at 1017.888 kb on - strand at 1018.190 kb on + strand, within DvMF_0842 at 1018.191 kb on - strand, within DvMF_0842 at 1018.217 kb on + strand, within DvMF_0842 at 1018.337 kb on + strand, within DvMF_0842 at 1018.345 kb on - strand, within DvMF_0842 at 1018.353 kb on + strand, within DvMF_0842 at 1018.430 kb on - strand, within DvMF_0842 at 1018.574 kb on - strand, within DvMF_0842 at 1018.830 kb on - strand at 1019.082 kb on - strand, within DvMF_0843 at 1019.099 kb on + strand, within DvMF_0843 at 1019.128 kb on - strand, within DvMF_0843 at 1019.142 kb on - strand, within DvMF_0843 at 1019.646 kb on + strand, within DvMF_0843 at 1019.654 kb on - strand, within DvMF_0843 at 1019.669 kb on - strand, within DvMF_0843 at 1019.678 kb on - strand, within DvMF_0843 at 1019.790 kb on - strand, within DvMF_0843 at 1019.800 kb on - strand, within DvMF_0843 at 1019.836 kb on - strand, within DvMF_0843 at 1019.889 kb on + strand, within DvMF_0843 at 1019.892 kb on - strand, within DvMF_0843 at 1020.256 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6 days starvation remove 1,017,860 - +0.1 1,017,888 - +0.6 1,018,190 + DvMF_0842 0.15 -0.5 1,018,191 - DvMF_0842 0.15 -0.3 1,018,217 + DvMF_0842 0.20 -0.6 1,018,337 + DvMF_0842 0.43 -0.1 1,018,345 - DvMF_0842 0.44 -0.5 1,018,353 + DvMF_0842 0.46 -1.3 1,018,430 - DvMF_0842 0.60 -0.6 1,018,574 - DvMF_0842 0.87 -0.4 1,018,830 - -0.4 1,019,082 - DvMF_0843 0.23 -0.7 1,019,099 + DvMF_0843 0.24 -0.9 1,019,128 - DvMF_0843 0.26 -0.4 1,019,142 - DvMF_0843 0.27 -0.4 1,019,646 + DvMF_0843 0.67 -1.2 1,019,654 - DvMF_0843 0.68 +0.2 1,019,669 - DvMF_0843 0.69 -0.6 1,019,678 - DvMF_0843 0.70 -1.1 1,019,790 - DvMF_0843 0.79 +0.4 1,019,800 - DvMF_0843 0.79 -0.4 1,019,836 - DvMF_0843 0.82 -0.4 1,019,889 + DvMF_0843 0.87 -0.6 1,019,892 - DvMF_0843 0.87 -0.9 1,020,256 - -0.3
Or see this region's nucleotide sequence